Ternary complex of RNA Pol II, transcription scaffold and Rad26

Summary for 5VVR

EMDB information8735 8736 8737
DescriptorDNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB2, DNA-directed RNA polymerase II subunit RPB3, ... (18 entities in total)
Functional Keywordscomplex, rna polymerase, csb, transcription, transcription-rna-dna complex, transcription/rna/dna
Biological sourceSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Total number of polymer chains16
Total molecular weight671443.85
Lahiri, I.,Leschziner, A.E. (deposition date: 2017-05-19, release date: 2017-11-22, Last modification date: 2020-01-01)
Primary citation
Xu, J.,Lahiri, I.,Wang, W.,Wier, A.,Cianfrocco, M.A.,Chong, J.,Hare, A.A.,Dervan, P.B.,DiMaio, F.,Leschziner, A.E.,Wang, D.
Structural basis for the initiation of eukaryotic transcription-coupled DNA repair.
Nature, 551:653-657, 2017
PubMed: 29168508 (PDB entries with the same primary citation)
DOI: 10.1038/nature24658
MImport into Mendeley
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliersRNA backbone41.8%0.1%0.40MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures
Download full validation reportDownload
PDB entries from 2020-09-16