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PDB: 1631 results

8WTZ
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potassium outward rectifier channel SKOR
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Potassium channel SKOR
Authors:Gao, X, Sun, T, Lu, Y, Jia, Y, Xu, X, Zhang, Y, Fu, P, Yang, G.
Deposit date:2023-10-19
Release date:2024-04-10
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural changes in the conversion of an Arabidopsis outward-rectifying K + channel into an inward-rectifying channel.
Plant Commun., 5, 2024
8WUI
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BU of 8wui by Molmil
SKOR D312N L271P double mutation
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Potassium channel SKOR
Authors:Gao, X, Sun, T, Lu, Y, Jia, Y, Xu, X, Zhang, Y, Fu, P, Yang, G.
Deposit date:2023-10-20
Release date:2024-04-10
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural changes in the conversion of an Arabidopsis outward-rectifying K + channel into an inward-rectifying channel.
Plant Commun., 5, 2024
7E3J
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BU of 7e3j by Molmil
Crystal structure of SARS-CoV-2 RBD binding to dog ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACE2, Spike protein S1, ...
Authors:Zhang, Z, Zhang, Y.
Deposit date:2021-02-08
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The molecular basis for SARS-CoV-2 binding to dog ACE2.
Nat Commun, 12, 2021
7VBH
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BU of 7vbh by Molmil
Cryo-EM structure of the GIPR/GLP-1R/GCGR triagonist peptide 20-bound human GLP-1R-Gs complex
Descriptor: Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhao, F.H, Zhou, Q.T, Cong, Z.T, Hang, K.N, Zou, X.Y, Zhang, C, Chen, Y, Dai, A.T, Liang, A.Y, Ming, Q.Q, Wang, M, Chen, L.N, Xu, P.Y, Chang, R.L, Feng, W.B, Xia, T, Zhang, Y, Wu, B.L, Yang, D.H, Zhao, L.H, Xu, H.E, Wang, M.W.
Deposit date:2021-08-31
Release date:2022-04-06
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into multiplexed pharmacological actions of tirzepatide and peptide 20 at the GIP, GLP-1 or glucagon receptors.
Nat Commun, 13, 2022
6JKP
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BU of 6jkp by Molmil
Crystal structure of sulfoacetaldehyde reductase from Bifidobacterium kashiwanohense in complex with NAD+
Descriptor: Methanol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Zhou, Y, Xu, T, Lin, L, Zhang, Y, Yuchi, Z.
Deposit date:2019-03-01
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.008 Å)
Cite:Identification and characterization of a new sulfoacetaldehyde reductase from the human gut bacteriumBifidobacterium kashiwanohense.
Biosci.Rep., 39, 2019
6JKO
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Crystal structure of sulfoacetaldehyde reductase from Bifidobacterium kashiwanohense
Descriptor: Methanol dehydrogenase, ZINC ION
Authors:Zhou, Y, Xu, T, Lin, L, Zhang, Y, Yuchi, Z.
Deposit date:2019-03-01
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Identification and characterization of a new sulfoacetaldehyde reductase from the human gut bacteriumBifidobacterium kashiwanohense.
Biosci.Rep., 39, 2019
7WDL
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BU of 7wdl by Molmil
Fungal immunomodulatory protein FIP-nha
Descriptor: Fungal immunomodulatory protein
Authors:Liu, Y, Bastiaan-Net, S, Zhang, Y, Hoppenbrouwers, T, Xie, Y, Wang, Y, Wei, X, Du, G, Zhang, H, Imam, K.M.S.U, Wichers, H.J, Li, Z.
Deposit date:2021-12-22
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Linking the thermostability of FIP-nha (Nectria haematococca) to its structural properties.
Int.J.Biol.Macromol., 213, 2022
7DLY
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BU of 7dly by Molmil
Crystal structure of Arabidopsis ACS7 mutant in complex with PPG
Descriptor: (2E,3E)-4-(2-aminoethoxy)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]but-3-enoic acid, 1-aminocyclopropane-1-carboxylate synthase 7
Authors:Hao, B, Zhang, Y, Li, X, Rao, Z.
Deposit date:2020-11-30
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Dual activities of ACC synthase: Novel clues regarding the molecular evolution of ACS genes.
Sci Adv, 7, 2021
7DLW
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BU of 7dlw by Molmil
Crystal structure of Arabidopsis ACS7 in complex with PPG
Descriptor: (2E,3E)-4-(2-aminoethoxy)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]but-3-enoic acid, 1-aminocyclopropane-1-carboxylate synthase 7, SULFATE ION
Authors:Hao, B, Zhang, Y, Li, X, Rao, Z.
Deposit date:2020-11-30
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Dual activities of ACC synthase: Novel clues regarding the molecular evolution of ACS genes.
Sci Adv, 7, 2021
6KCW
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BU of 6kcw by Molmil
Structure of alginate lyase Aly36B
Descriptor: Alginate lyase, CALCIUM ION, PHOSPHATE ION
Authors:Dong, F, Chen, X.L, Zhang, Y.Z.
Deposit date:2019-06-29
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Alginate Lyase Aly36B is a New Bacterial Member of the Polysaccharide Lyase Family 36 and Catalyzes by a Novel Mechanism With Lysine as Both the Catalytic Base and Catalytic Acid.
J.Mol.Biol., 431, 2019
5U0P
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BU of 5u0p by Molmil
Cryo-EM structure of the transcriptional Mediator
Descriptor: Mediator complex subunit 10, Mediator complex subunit 11, Mediator complex subunit 14, ...
Authors:Tsai, K.-L, Yu, X, Gopalan, S, Chao, T.-C, Zhang, Y, Florens, L, Washburn, M.P, Murakami, K, Conaway, R.C, Conaway, J.W, Asturias, F.
Deposit date:2016-11-26
Release date:2017-03-08
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Mediator structure and rearrangements required for holoenzyme formation.
Nature, 544, 2017
7CAL
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BU of 7cal by Molmil
Cryo-EM Structure of the Hyperpolarization-Activated Inwardly Rectifying Potassium Channel KAT1 from Arabidopsis
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Potassium channel KAT1
Authors:Li, S.Y, Yang, F, Sun, D.M, Zhang, Y, Zhang, M.G, Zhou, P, Liu, S.L, Zhang, Y.N, Zhang, L.H, Tian, C.L.
Deposit date:2020-06-09
Release date:2020-07-29
Last modified:2020-11-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of the hyperpolarization-activated inwardly rectifying potassium channel KAT1 from Arabidopsis.
Cell Res., 30, 2020
7CM9
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BU of 7cm9 by Molmil
DMSP lyase DddX
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DMSP lyase, SULFATE ION
Authors:Li, C.Y, Zhang, Y.Z.
Deposit date:2020-07-25
Release date:2021-05-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.249 Å)
Cite:A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA.
Elife, 10, 2021
2M0G
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BU of 2m0g by Molmil
Structure, phosphorylation and U2AF65 binding of the Nterminal Domain of splicing factor 1 during 3 splice site Recognition
Descriptor: Splicing factor 1, Splicing factor U2AF 65 kDa subunit
Authors:Madl, T, Sattler, M, Zhang, Y, Bagdiul, I, Kern, T, Kang, H, Zou, P, Maeusbacher, N, Sieber, S.A, Kraemer, A.
Deposit date:2012-10-25
Release date:2013-01-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure, phosphorylation and U2AF65 binding of the N-terminal domain of splicing factor 1 during 3'-splice site recognition.
Nucleic Acids Res., 41, 2013
7V1N
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BU of 7v1n by Molmil
Structure of the Clade 2 C. difficile TcdB in complex with its receptor TFPI
Descriptor: Isoform Beta of Tissue factor pathway inhibitor, Toxin B
Authors:Luo, J, Yang, Q, Zhang, X, Zhang, Y, Wan, L, Li, Y, Tao, L.
Deposit date:2021-08-05
Release date:2022-02-23
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:TFPI is a colonic crypt receptor for TcdB from hypervirulent clade 2 C. difficile.
Cell, 185, 2022
2M09
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BU of 2m09 by Molmil
Structure, phosphorylation and U2AF65 binding of the Nterminal Domain of splicing factor 1 during 3 splice site Recognition
Descriptor: Splicing factor 1
Authors:Madl, T, Sattler, M, Zhang, Y, Bagdiul, I, Kern, T, Kang, H, Zou, P, Maeusbacher, N, Sieber, S.A, Kraemer, A.
Deposit date:2012-10-22
Release date:2013-01-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure, phosphorylation and U2AF65 binding of the N-terminal domain of splicing factor 1 during 3'-splice site recognition.
Nucleic Acids Res., 41, 2013
7EBS
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BU of 7ebs by Molmil
Crystal structure of juvenile hormone acid methyltransferase JHAMT from silkworm
Descriptor: Juvenile hormone acid methyltransferase
Authors:Guo, P.C, Zhang, Y.S, Zhang, L, Xu, H.Y, Xia, Q.Y.
Deposit date:2021-03-11
Release date:2021-09-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural basis for juvenile hormone biosynthesis by the juvenile hormone acid methyltransferase.
J.Biol.Chem., 297, 2021
7EBX
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BU of 7ebx by Molmil
Crystal structure of juvenile hormone acid methyltransferase JHAMT in complex with S-adenosyl-L-homocysteine.
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, juvenile hormone acid methyltransferase
Authors:Guo, P.C, Zhang, Y.S, Zhang, L, Xu, H.Y, Xia, Q.Y.
Deposit date:2021-03-11
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural basis for juvenile hormone biosynthesis by the juvenile hormone acid methyltransferase.
J.Biol.Chem., 297, 2021
7EC0
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BU of 7ec0 by Molmil
Crystal structure of juvenile hormone acid methyltransferase JHAMT in complex with S-Adenosyl homocysteine and methyl farnesoate
Descriptor: Juvenile hormone acid methyltransferase, Methyl farnesoate, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Guo, P.C, Zhang, Y.S, Zhang, L, Xu, H.Y, Xia, Q.Y.
Deposit date:2021-03-11
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.494 Å)
Cite:Structural basis for juvenile hormone biosynthesis by the juvenile hormone acid methyltransferase.
J.Biol.Chem., 297, 2021
2N1D
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BU of 2n1d by Molmil
Solution structure of the MRG15-MRGBP complex
Descriptor: MRG/MORF4L-binding protein, Mortality factor 4-like protein 1
Authors:Xie, T, Zmysloski, A.M, Zhang, Y, Radhakrishnan, I.
Deposit date:2015-03-27
Release date:2015-05-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for Multi-specificity of MRG Domains.
Structure, 23, 2015
8TWR
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BU of 8twr by Molmil
Influenza A virus (A/Aichi/2/1968(H3N2) nucleoprotein mutant - 2-7 deleted, P283S, R416A
Descriptor: Nucleoprotein, SODIUM ION
Authors:Yoon, J, Zhang, Y.M, Grant, R.A, Shoulders, M.D.
Deposit date:2023-08-21
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure.
Sci Adv, 10, 2024
8V2L
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BU of 8v2l by Molmil
Crystal structure of IRAK4 kinase domain with compound 8
Descriptor: 1,2-ETHANEDIOL, Interleukin-1 receptor-associated kinase 4, N-{2-[4-(hydroxymethyl)phenyl]-6-(2-hydroxypropan-2-yl)-2H-indazol-5-yl}-6-(trifluoromethyl)pyridine-2-carboxamide
Authors:Weiss, M.M, Zheng, X, Browne, C.M, Campbell, V, Chen, D, Enerson, B, Fei, X, Huang, X, Klaus, C.R, Li, H, Mayo, M, McDonald, A.A, Paul, A, Sharma, K, Shi, Y, Slavin, A, Walter, D.M, Yuan, K, Zhang, Y, Zhu, X, Kelleher, J, Ji, N, Walker, D, Mainolfi, N.
Deposit date:2023-11-22
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Discovery of KT-413, a Targeted Protein Degrader of IRAK4 and IMiD Substrates Targeting MYD88 Mutant Diffuse Large B-Cell Lymphoma.
J.Med.Chem., 2024
3SOB
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BU of 3sob by Molmil
The structure of the first YWTD beta propeller domain of LRP6 in complex with a FAB
Descriptor: CALCIUM ION, Low-density lipoprotein receptor-related protein 6, antibody heavy chain, ...
Authors:Wang, W, Bourhis, E, Tam, C, Zhang, Y, Rouge, L, Wu, Y, Franke, Y, Cochran, A.G.
Deposit date:2011-06-30
Release date:2011-09-21
Last modified:2014-05-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Wnt antagonists bind through a short peptide to the first beta-propeller domain of LRP5/6.
Structure, 19, 2011
8WM0
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BU of 8wm0 by Molmil
Crystal structure of TNIK-thiopeptide wTP3 complex
Descriptor: ADENOSINE, THIOPEPTIDE wTP3, TRAF2 and NCK-interacting protein kinase
Authors:Hamada, K, Kobayashi, S, Vinogradov, A.A, Zhang, Y, Goto, Y, Suga, H, Ogata, K, Sengoku, T.
Deposit date:2023-10-01
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Compact Reprogrammed Genetic Code for De Novo Discovery of Proteolytically Stable Thiopeptides.
J.Am.Chem.Soc., 2024
6JIX
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BU of 6jix by Molmil
The cyrstal structure of taurine:2-oxoglutarate aminotransferase from Bifidobacterium kashiwanohense, in complex with PLP and glutamate
Descriptor: GLUTAMIC ACID, PYRIDOXAL-5'-PHOSPHATE, taurine:2-oxoglutarate aminotransferase
Authors:Li, M, Lin, L, Zhang, Y, Yuchi, Z.
Deposit date:2019-02-23
Release date:2020-01-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.647 Å)
Cite:Biochemical and structural investigation of taurine:2-oxoglutarate aminotransferase fromBifidobacterium kashiwanohense.
Biochem.J., 476, 2019

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