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PDB: 1677 results

3SZF
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Crystal structure of sulfide:quinone oxidoreductase H198A variant from Acidithiobacillus ferrooxidans in complex with bound trisulfide and decylubiquinone
Descriptor: 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, DODECYL-BETA-D-MALTOSIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Cherney, M.M, Zhang, Y, James, M.N.G, Weiner, J.H.
Deposit date:2011-07-18
Release date:2012-05-16
Last modified:2014-05-07
Method:X-RAY DIFFRACTION (2.0994 Å)
Cite:Structure-activity characterization of sulfide:quinone oxidoreductase variants.
J.Struct.Biol., 178, 2012
3SZW
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Crystal structure of sulfide:quinone oxidoreductase Cys128Ser variant from Acidithiobacillus ferrooxidans in complex with decylubiquinone
Descriptor: 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, DODECYL-BETA-D-MALTOSIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Cherney, M.M, Zhang, Y, James, M.N.G, Weiner, J.H.
Deposit date:2011-07-19
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-activity characterization of sulfide:quinone oxidoreductase variants.
J.Struct.Biol., 178, 2012
3SX6
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Crystal structure of sulfide:quinone oxidoreductase Cys356Ala variant from Acidithiobacillus ferrooxidans complexed with decylubiquinone
Descriptor: 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, DODECYL-BETA-D-MALTOSIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Cherney, M.M, Zhang, Y, James, M.N.G, Weiner, J.H.
Deposit date:2011-07-14
Release date:2012-05-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.7955 Å)
Cite:Structure-activity characterization of sulfide:quinone oxidoreductase variants.
J.Struct.Biol., 178, 2012
8UWU
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BU of 8uwu by Molmil
EmrE structure in the proton-bound state (WT/L51I heterodimer)
Descriptor: SMR family multidrug efflux protein EmrE
Authors:Li, J, Sae Her, A, Besch, A, Ramirez, B, Crames, M, Banigan, J.R, Mueller, C, Marsiglia, W.M, Zhang, Y, Traaseth, N.J.
Deposit date:2023-11-08
Release date:2024-05-29
Last modified:2024-07-03
Method:SOLID-STATE NMR, SOLUTION NMR
Cite:Dynamics underlie the drug recognition mechanism by the efflux transporter EmrE.
Nat Commun, 15, 2024
7Y36
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BU of 7y36 by Molmil
Cryo-EM structure of the Teriparatide-bound human PTH1R-Gs complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, HYDROXIDE ION, ...
Authors:Zhai, X, Mao, C, Shen, Q, Zang, S, Shen, D, Zhang, H, Chen, Z, Wang, G, Zhang, C, Zhang, Y, Liu, Z.
Deposit date:2022-06-10
Release date:2023-07-05
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structure of the Teriparatide-bound human PTH1R-Gs complex
to be published
7Y35
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BU of 7y35 by Molmil
Cryo-EM structure of the Abaloparatide-bound human PTH1R-Gs complex
Descriptor: Abaloparatide, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhai, X, Mao, C, Shen, Q, Zang, S, Shen, D, Zhang, H, Chen, Z, Wang, G, Zhang, C, Zhang, Y, Liu, Z.
Deposit date:2022-06-09
Release date:2023-07-05
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structure of the Abaloparatide-bound human PTH1R-Gs complex
To Be Published
7XZR
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BU of 7xzr by Molmil
Crystal structure of TNIK-AMPPNP-thiopeptide TP15 complex
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION, ...
Authors:Hamada, K, Vinogradov, A.A, Zhang, Y, Chang, J.S, Nishimura, H, Goto, Y, Onaka, H, Suga, H, Ogata, K, Sengoku, T.
Deposit date:2022-06-03
Release date:2022-10-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:De Novo Discovery of Thiopeptide Pseudo-natural Products Acting as Potent and Selective TNIK Kinase Inhibitors.
J.Am.Chem.Soc., 144, 2022
7XZQ
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BU of 7xzq by Molmil
Crystal structure of TNIK-thiopeptide TP1 complex
Descriptor: 1,4-BUTANEDIOL, TRAF2 and NCK-interacting protein kinase, thiopeptide TP1
Authors:Hamada, K, Vinogradov, A.A, Zhang, Y, Chang, J.S, Nishimura, H, Goto, Y, Onaka, H, Suga, H, Ogata, K, Sengoku, T.
Deposit date:2022-06-03
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:De Novo Discovery of Thiopeptide Pseudo-natural Products Acting as Potent and Selective TNIK Kinase Inhibitors.
J.Am.Chem.Soc., 144, 2022
6BXL
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BU of 6bxl by Molmil
Crystal structure of Pyrococcus horikoshii Dph2 with 4Fe-4S cluster and SAM
Descriptor: 2-(3-amino-3-carboxypropyl)histidine synthase, IRON/SULFUR CLUSTER, S-ADENOSYLMETHIONINE
Authors:Torelli, A.T, Fenwick, M.K, Zhang, Y, Dong, M, Kathiresan, V, Carantoa, J.D, Dzikovski, B, Lancaster, K.M, Freed, J.H, Hoffman, B.M, Lin, H, Ealick, S.E.
Deposit date:2017-12-18
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Organometallic and radical intermediates reveal mechanism of diphthamide biosynthesis.
Science, 359, 2018
3SZ0
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BU of 3sz0 by Molmil
Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans in complex with sodium selenide
Descriptor: DODECYL-BETA-D-MALTOSIDE, FLAVIN-ADENINE DINUCLEOTIDE, SELENIUM ATOM, ...
Authors:Cherney, M.M, Zhang, Y, James, M.N.G, Weiner, J.H.
Deposit date:2011-07-18
Release date:2012-05-16
Last modified:2012-07-25
Method:X-RAY DIFFRACTION (2.1501 Å)
Cite:Structure-activity characterization of sulfide:quinone oxidoreductase variants.
J.Struct.Biol., 178, 2012
6BXN
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BU of 6bxn by Molmil
Crystal structure of Candidatus Methanoperedens nitroreducens Dph2 with 4Fe-4S cluster and SAM
Descriptor: Diphthamide biosynthesis enzyme Dph2, IRON/SULFUR CLUSTER, S-ADENOSYLMETHIONINE
Authors:Fenwick, M.K, Torelli, A.T, Zhang, Y, Dong, M, Kathiresan, V, Carantoa, J.D, Dzikovski, B, Lancaster, K.M, Freed, J.H, Hoffman, B.M, Lin, H, Ealick, S.E.
Deposit date:2017-12-18
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.079 Å)
Cite:Organometallic and radical intermediates reveal mechanism of diphthamide biosynthesis.
Science, 359, 2018
3SZC
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BU of 3szc by Molmil
Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans in complex with gold (I) cyanide
Descriptor: 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, FLAVIN-ADENINE DINUCLEOTIDE, GOLD ION, ...
Authors:Cherney, M.M, Zhang, Y, James, M.N.G, Weiner, J.H.
Deposit date:2011-07-18
Release date:2012-05-16
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-activity characterization of sulfide:quinone oxidoreductase variants.
J.Struct.Biol., 178, 2012
6BXK
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BU of 6bxk by Molmil
Crystal structure of Pyrococcus horikoshii Dph2 with 4Fe-4S cluster and MTA
Descriptor: 2-(3-amino-3-carboxypropyl)histidine synthase, 5'-DEOXY-5'-METHYLTHIOADENOSINE, IRON/SULFUR CLUSTER, ...
Authors:Torelli, A.T, Fenwick, M.K, Zhang, Y, Dong, M, Kathiresan, V, Carantoa, J.D, Dzikovski, B, Lancaster, K.M, Freed, J.H, Hoffman, B.M, Lin, H, Ealick, S.E.
Deposit date:2017-12-18
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.347 Å)
Cite:Organometallic and radical intermediates reveal mechanism of diphthamide biosynthesis.
Science, 359, 2018
7XUL
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BU of 7xul by Molmil
Human SLC26A3 in complex with Tenidap
Descriptor: 5-chloranyl-2-oxidanyl-3-thiophen-2-ylcarbonyl-indole-1-carboxamide, CHOLESTEROL HEMISUCCINATE, Chloride anion exchanger
Authors:Li, X.R, Chi, X.M, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-05-18
Release date:2023-05-24
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structure of human SLC26A3 in complex with Tenidap
To Be Published
7XUJ
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BU of 7xuj by Molmil
Human SLC26A3 in complex with UK5099
Descriptor: (E)-2-cyano-3-(1-phenylindol-3-yl)prop-2-enoic acid, CHOLESTEROL HEMISUCCINATE, Chloride anion exchanger
Authors:Li, X.R, Chi, X.M, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-05-18
Release date:2023-05-24
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:human SLC26A3 in complex with UK5099
To Be Published
7XL4
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BU of 7xl4 by Molmil
Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (closed lobe)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2022-04-21
Release date:2022-07-27
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
7XL3
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BU of 7xl3 by Molmil
Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (open lobe)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2022-04-21
Release date:2022-07-27
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
6LK5
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BU of 6lk5 by Molmil
MLKL mutant - T357ES358D
Descriptor: Mixed lineage kinase domain-like protein
Authors:Wang, H.Y, Li, S, Zhang, Y.
Deposit date:2019-12-18
Release date:2020-12-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The MLKL kinase-like domain dimerization is an indispensable step of mammalian MLKL activation in necroptosis signaling.
Cell Death Dis, 12, 2021
7XUH
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BU of 7xuh by Molmil
Down-regulated in adenoma in complex with TQR1122
Descriptor: 2-[4,8-dimethyl-2-oxidanylidene-7-[[3-(trifluoromethyl)phenyl]methoxy]chromen-3-yl]ethanoic acid, CHOLESTEROL HEMISUCCINATE, Chloride anion exchanger
Authors:Li, X.R, Chi, X.M, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-05-18
Release date:2023-08-02
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:structure of human SLC26A3 in complex with TQR1122
To Be Published
6BXM
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BU of 6bxm by Molmil
Crystal structure of Candidatus Methanoperedens nitroreducens Dph2 with 4Fe-4S cluster and SAM/cleaved SAM
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, ALPHA-AMINOBUTYRIC ACID, Diphthamide biosynthesis enzyme Dph2, ...
Authors:Fenwick, M.K, Torelli, A.T, Zhang, Y, Dong, M, Kathiresan, V, Carantoa, J.D, Dzikovski, B, Lancaster, K.M, Freed, J.H, Hoffman, B.M, Lin, H, Ealick, S.E.
Deposit date:2017-12-18
Release date:2018-04-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Organometallic and radical intermediates reveal mechanism of diphthamide biosynthesis.
Science, 359, 2018
7CMU
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BU of 7cmu by Molmil
Dopamine Receptor D3R-Gi-Pramipexole complex
Descriptor: (6S)-N6-propyl-4,5,6,7-tetrahydro-1,3-benzothiazole-2,6-diamine, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Xu, P, Huang, S, Mao, C, Krumm, B, Zhou, X, Tan, Y, Huang, X.-P, Liu, Y, Shen, D.-D, Jiang, Y, Yu, X, Jiang, H, Melcher, K, Roth, B, Cheng, X, Zhang, Y, Xu, H.
Deposit date:2020-07-29
Release date:2021-03-10
Last modified:2021-04-07
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structures of the human dopamine D3 receptor-G i complexes.
Mol.Cell, 81, 2021
7CMV
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BU of 7cmv by Molmil
Dopamine Receptor D3R-Gi-PD128907 complex
Descriptor: (4aR,10bR)-4-propyl-3,4a,5,10b-tetrahydro-2H-chromeno[4,3-b][1,4]oxazin-9-ol, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Xu, P, Huang, S, Mao, C, Krumm, B, Zhou, X, Tan, Y, Huang, X.-P, Liu, Y, Shen, D.-D, Jiang, Y, Yu, X, Jiang, H, Melcher, K, Roth, B, Cheng, X, Zhang, Y, Xu, H.
Deposit date:2020-07-29
Release date:2021-03-10
Last modified:2021-04-07
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structures of the human dopamine D3 receptor-G i complexes.
Mol.Cell, 81, 2021
7XRD
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BU of 7xrd by Molmil
Cryo-EM structure of Arf6 helical polymer assembled on lipid membrane
Descriptor: ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Pang, X.Y, Zhang, Y, Sun, F.
Deposit date:2022-05-10
Release date:2023-11-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of Arf6 helical polymer assembled on lipid membrane
To Be Published
4OHR
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BU of 4ohr by Molmil
Crystal structure of MilB from Streptomyces rimofaciens
Descriptor: CMP/hydroxymethyl CMP hydrolase
Authors:Zhao, G, Zhang, Y, Liu, G, Wu, G, He, X.
Deposit date:2014-01-17
Release date:2014-06-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the N-glycosidase MilB in complex with hydroxymethyl CMP reveals its Arg23 specifically recognizes the substrate and controls its entry
Nucleic Acids Res., 42, 2014
6BLM
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BU of 6blm by Molmil
Crystal Structure of Native Fused 4-OT
Descriptor: 4-oxalocrotonate tautomerase
Authors:LeVieux, J, Baas, B.J, Zhang, Y.J, Whitman, C.P.
Deposit date:2017-11-10
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.488 Å)
Cite:A global view of structure-function relationships in the tautomerase superfamily.
J. Biol. Chem., 293, 2018

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