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PDB: 809 件

4N3Z
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Crystal structure of Rabex-5delta and Rabaptin-5C21 complex
分子名称: PHOSPHATE ION, Rab GTPase-binding effector protein 1, Rab5 GDP/GTP exchange factor
著者Zhang, Z, Zhang, T, Ding, J.
登録日2013-10-08
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Molecular mechanism for Rabex-5 GEF activation by Rabaptin-5
Elife, 3, 2014
5ZSC
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BU of 5zsc by Molmil
Crystal structure of monkey TLR7 in complex with IMDQ and CCUUCC
分子名称: 1-[[4-(aminomethyl)phenyl]methyl]-2-butyl-imidazo[4,5-c]quinolin-4-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhang, Z, Ohto, U, Shimizu, T.
登録日2018-04-28
公開日2019-01-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Analyses of Toll-like Receptor 7 Reveal Detailed RNA Sequence Specificity and Recognition Mechanism of Agonistic Ligands.
Cell Rep, 25, 2018
2LW6
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BU of 2lw6 by Molmil
Solution structure of an avirulence protein AvrPiz-t from pathogen Magnaportheoryzae
分子名称: AvrPiz-t protein
著者Zhang, Z.-M, Zhang, X, Zhou, Z, Hu, H, Liu, M, Zhou, B, Zhou, J.
登録日2012-07-23
公開日2012-09-12
最終更新日2013-03-13
実験手法SOLUTION NMR
主引用文献Solution structure of the Magnaporthe oryzae avirulence protein AvrPiz-t.
J.Biomol.Nmr, 55, 2013
4H20
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BU of 4h20 by Molmil
Crystal Structure and Computational Modeling of the Fab Fragment from the Protective anti-Ricin Monoclonal Antibody RAC18
分子名称: Heavy chain of Fab Fragment from the anti-Ricin Monoclonal Antibody RAC18, Light chain of Fab Fragment from the anti-Ricin Monoclonal Antibody RAC18
著者Zhao, Z, Worthylake, D.K, LeCour Jr, L.F, Maresh, G, Pincus, S.H.
登録日2012-09-11
公開日2012-10-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure and computational modeling of the fab fragment from a protective anti-ricin monoclonal antibody.
Plos One, 7, 2012
7E3J
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BU of 7e3j by Molmil
Crystal structure of SARS-CoV-2 RBD binding to dog ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACE2, Spike protein S1, ...
著者Zhang, Z, Zhang, Y.
登録日2021-02-08
公開日2021-04-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献The molecular basis for SARS-CoV-2 binding to dog ACE2.
Nat Commun, 12, 2021
7DEU
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BU of 7deu by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody scFv
著者Zhang, Z, Zhang, G, Li, X, Rao, Z, Guo, Y.
登録日2020-11-05
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for SARS-CoV-2 neutralizing antibodies with novel binding epitopes.
Plos Biol., 19, 2021
4WXX
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BU of 4wxx by Molmil
The crystal structure of human DNMT1(351-1600)
分子名称: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Zhang, Z.M, Song, J.
登録日2014-11-14
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.622 Å)
主引用文献Crystal Structure of Human DNA Methyltransferase 1.
J.Mol.Biol., 427, 2015
1ZUC
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BU of 1zuc by Molmil
Progesterone receptor ligand binding domain in complex with the nonsteroidal agonist tanaproget
分子名称: 5-(4,4-DIMETHYL-2-THIOXO-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-6-YL)-1-METHYL-1H-PYRROLE-2-CARBONITRILE, Progesterone receptor, SULFATE ION
著者Zhang, Z, Olland, A.M, Zhu, Y, Cohen, J, Berrodin, T, Chippari, S, Appavu, C, Li, S, Wilhem, J, Chopra, R, Fensome, A, Zhang, P, Wrobel, J, Unwalla, R.J, Lyttle, C.R, Winneker, R.C.
登録日2005-05-30
公開日2005-07-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular and pharmacological properties of a potent and selective novel nonsteroidal progesterone receptor agonist tanaproget
J.Biol.Chem., 280, 2005
6K10
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BU of 6k10 by Molmil
Non substrate bound state of Staphylococcus Aureus AldH
分子名称: 1,2-ETHANEDIOL, Aldehyde dehydrogenase
著者Zhang, Z, Tao, X.
登録日2019-05-08
公開日2020-05-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.78962183 Å)
主引用文献Structural Insight into the Substrate Gating Mechanism by Staphylococcus aureus Aldehyde Dehydrogenase
CCS Chemistry, 2, 2020
5K07
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BU of 5k07 by Molmil
Crystal structure of CREN7-DSDNA (GTAATTGC) complex
分子名称: Chromatin protein Cren7, DNA (5'-D(*GP*TP*AP*AP*TP*TP*GP*C)-3')
著者Zhang, Z.F, Gong, Y.
登録日2016-05-17
公開日2017-05-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Sequence-Dependent T:G Base Pair Opening in DNA Double Helix Bound by Cren7, a Chromatin Protein Conserved among Crenarchaea
PLoS ONE, 11, 2016
5K17
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Crystal structure of CREN7-DSDNA (GTGATCGC) complex
分子名称: Chromatin protein Cren7, DNA (5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3')
著者Zhang, Z.F, Gong, Y.
登録日2016-05-17
公開日2017-05-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Sequence-Dependent T:G Base Pair Opening in DNA Double Helix Bound by Cren7, a Chromatin Protein Conserved among Crenarchaea
PLoS ONE, 11, 2016
8UX2
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Chromobacterium violaceum mono-ADP-ribosyltransferase CteC in complex with NAD+
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, NAD(+)--protein-threonine ADP-ribosyltransferase, ...
著者Zhang, Z, Rondon, H, Das, C.
登録日2023-11-08
公開日2024-01-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of bacterial ubiquitin ADP-ribosyltransferase CteC reveals a substrate-recruiting insertion.
J.Biol.Chem., 300, 2023
5JO4
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BU of 5jo4 by Molmil
Antibody Fab Fragment Complex
分子名称: D80 Fab Heavy Chain, D80 Fab Light Chain, G6 Fab Heavy Chain, ...
著者Zhang, Z, Prachanronarong, K.P, Marasco, W.A, Schiffer, C.A.S.
登録日2016-05-01
公開日2017-11-08
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Structural Basis of an Influenza Hemagglutinin Stem-Directed Antibody Retaining the G6 Idiotype
To Be Published
8QP9
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Cryo-EM Structure of Pre-B+AMPPNP Complex (core part)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, INOSITOL HEXAKISPHOSPHATE, Pre-mRNA-processing factor 6, ...
著者Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Zhong, J, Ludwig, S, Urlaub, H, Kastner, B, Stark, H, Luehrmann, R.
登録日2023-09-30
公開日2024-05-22
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural insights into the cross-exon to cross-intron spliceosome switch.
Nature, 630, 2024
5JQD
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BU of 5jqd by Molmil
Antibody Fab Fragment
分子名称: D80 Fab Fragment Heavy Chain, D80 Fab Fragment Light Chain
著者Zhang, Z, Prachanronarong, K, Gellatly, K, Marasco, W.A, Schiffer, C.A.
登録日2016-05-04
公開日2017-11-08
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (2.591 Å)
主引用文献Structural Basis of an Influenza Hemagglutinin Stem-Directed Antibody Retaining the G6 Idiotype
To Be Published
8QP8
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BU of 8qp8 by Molmil
Cryo-EM Structure of Pre-B Complex (core part)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, INOSITOL HEXAKISPHOSPHATE, Pre-mRNA-processing factor 6, ...
著者Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Zhong, J, Ludwig, S, Urlaub, H, Kastner, B, Stark, H, Luehrmann, R.
登録日2023-09-30
公開日2024-05-22
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insights into the cross-exon to cross-intron spliceosome switch.
Nature, 630, 2024
8QPE
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BU of 8qpe by Molmil
Cryo-EM Structure of Pre-B-like Complex (core part)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, INOSITOL HEXAKISPHOSPHATE, Microfibrillar-associated protein 1, ...
著者Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Zhong, J, Ludwig, S, Urlaub, H, Kastner, B, Stark, H, Luehrmann, R.
登録日2023-10-01
公開日2024-05-22
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insights into the cross-exon to cross-intron spliceosome switch.
Nature, 630, 2024
4Z97
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BU of 4z97 by Molmil
Crystal structure of USP7 in complex with DNMT1(K1115Q)
分子名称: DNA (cytosine-5)-methyltransferase 1, GLYCEROL, Ubiquitin carboxyl-terminal hydrolase 7
著者Zhang, Z.M, Song, J.
登録日2015-04-09
公開日2016-10-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.998 Å)
主引用文献Crystal structure of USP7 in complex with DNMT1(K1115Q)
To Be Published
6KZC
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BU of 6kzc by Molmil
crystal structure of TRKc in complex with 3-(imidazo[1,2-a]pyrazin-3-ylethynyl)-2-methyl-N-(3-((4- methylpiperazin-1-yl)methyl)-5- (trifluoromethyl)phenyl)benzamide
分子名称: 3-(2-imidazo[1,2-a]pyrazin-3-ylethynyl)-2-methyl-~{N}-[3-(4-methylpiperazin-1-yl)-5-(trifluoromethyl)phenyl]benzamide, NT-3 growth factor receptor
著者Zhang, Z.M, Wang, Y.
登録日2019-09-23
公開日2019-10-09
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Design, synthesis and biological evaluation of 3-(imidazo[1,2-a]pyrazin-3-ylethynyl)-2-methylbenzamides as potent and selective pan-tropomyosin receptor kinase (TRK) inhibitors.
Eur.J.Med.Chem., 179, 2019
4Q9U
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BU of 4q9u by Molmil
Crystal structure of the Rab5, Rabex-5delta and Rabaptin-5C21 complex
分子名称: Rab GTPase-binding effector protein 1, Rab5 GDP/GTP exchange factor, Ras-related protein Rab-5A
著者Zhang, Z, Zhang, T, Ding, J.
登録日2014-05-01
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (4.618 Å)
主引用文献Molecular mechanism for Rabex-5 GEF activation by Rabaptin-5
Elife, 3, 2014
3EAX
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BU of 3eax by Molmil
Crystal structure PTP1B complex with small molecule compound LZP-6
分子名称: 4,4'-piperazine-1,4-diylbis{1-[3-(benzyloxy)phenyl]-4-oxobutane-1,3-dione}, Tyrosine-protein phosphatase non-receptor type 1
著者Zhang, Z.-Y, Liu, S, Zhang, L.-F, Yu, X, Xue, T, Gunawan, A.M, Long, Y.-Q.
登録日2008-08-26
公開日2009-07-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Targeting inactive enzyme conformation: aryl diketoacid derivatives as a new class of PTP1B inhibitors.
J.Am.Chem.Soc., 130, 2008
8SK6
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BU of 8sk6 by Molmil
human liver mitochondrial Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase
分子名称: Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
著者Zhang, Z, Tringides, M.
登録日2023-04-18
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SHS
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BU of 8shs by Molmil
human liver mitochondrial Aldehyde dehydrogenase ALDH2
分子名称: Aldehyde dehydrogenase, mitochondrial
著者Zhang, Z.
登録日2023-04-14
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SGV
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BU of 8sgv by Molmil
human liver mitochondrial Catalase
分子名称: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
著者Zhang, Z.
登録日2023-04-13
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SKR
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BU of 8skr by Molmil
human liver mitochondrial Aspartate aminotransferase
分子名称: Aspartate aminotransferase, mitochondrial, PYRIDOXAL-5'-PHOSPHATE
著者Zhang, Z, Tringides, M.
登録日2023-04-20
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023

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