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PDB: 351 件

5XKE
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Crystal structure of T2R-TTL-Demecolcine complex
分子名称: (7S)-1,2,3,10-tetramethoxy-7-(methylamino)-6,7-dihydro-5H-benzo[a]heptalen-9-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y, Yang, J, Wang, T, Chen, L.
登録日2017-05-07
公開日2018-07-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Identification of a powerful and reversible microtubule-inhibitor with efficacy against multidrug-resistant tumors
To Be Published
5XHC
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Crystal structure of T2R-TTL-PO10 complex
分子名称: (3Z,6Z)-3-[(4-tert-butyl-1H-imidazol-5-yl)methylidene]-6-[[3-(4-fluorophenyl)carbonylphenyl]methylidene]piperazine-2,5-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Chu, Y, Wang, Y, Yang, J, Li, W.
登録日2017-04-20
公開日2017-10-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Synthesis, biological evaluation and X-ray structure of anti-microtubule agents
To Be Published
2N8A
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BU of 2n8a by Molmil
1H, 13C and 15N chemical shift assignments and solution structure for PARP-1 F1F2 domains in complex with a DNA single-strand break
分子名称: DNA (45-MER), Poly [ADP-ribose] polymerase 1, ZINC ION
著者Neuhaus, D, Eustermann, S, Yang, J, Wu, W.
登録日2015-10-08
公開日2015-12-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Basis of Detection and Signaling of DNA Single-Strand Breaks by Human PARP-1.
Mol.Cell, 60, 2015
2MY1
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BU of 2my1 by Molmil
Solution structure of Bud31p
分子名称: Pre-mRNA-splicing factor BUD31, ZINC ION
著者van Roon, A.M, Yang, J, Mathieu, D, Bermel, W, Nagai, K, Neuhaus, D.
登録日2015-01-19
公開日2015-03-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献(113) Cd NMR Experiments Reveal an Unusual Metal Cluster in the Solution Structure of the Yeast Splicing Protein Bud31p.
Angew.Chem.Int.Ed.Engl., 54, 2015
2L31
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Human PARP-1 zinc finger 2
分子名称: Poly [ADP-ribose] polymerase 1, ZINC ION
著者Neuhaus, D, Eustermann, S, Yang, J, Videler, H.
登録日2010-08-30
公開日2011-02-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The DNA-binding domain of human PARP-1 interacts with DNA single-strand breaks as a monomer through its second zinc finger.
J.Mol.Biol., 407, 2011
2L30
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Human PARP-1 zinc finger 1
分子名称: Poly [ADP-ribose] polymerase 1, ZINC ION
著者Neuhaus, D, Eustermann, S, Yang, J, Videler, H.
登録日2010-08-30
公開日2011-02-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The DNA-binding domain of human PARP-1 interacts with DNA single-strand breaks as a monomer through its second zinc finger.
J.Mol.Biol., 407, 2011
7WAF
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BU of 7waf by Molmil
Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1) with ATPgammaS and 4x(beta-Asp-Arg)
分子名称: 4x(beta-Asp-Arg), ARGININE, Cyanophycin synthase, ...
著者Miyakawa, T, Yang, J, Kawasaki, M, Adachi, N, Fujii, A, Miyauchi, Y, Muramatsu, T, Moriya, T, Senda, T, Tanokura, M.
登録日2021-12-14
公開日2022-09-07
最終更新日2022-09-14
実験手法ELECTRON MICROSCOPY (2.52 Å)
主引用文献Structural bases for aspartate recognition and polymerization efficiency of cyanobacterial cyanophycin synthetase.
Nat Commun, 13, 2022
7WAC
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Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1)
分子名称: Cyanophycin synthase
著者Kawasaki, M, Miyakawa, T, Yang, J, Adachi, N, Fujii, A, Miyauchi, Y, Muramatsu, T, Moriya, T, Senda, T, Tanokura, M.
登録日2021-12-14
公開日2022-09-07
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Structural bases for aspartate recognition and polymerization efficiency of cyanobacterial cyanophycin synthetase.
Nat Commun, 13, 2022
7WAD
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Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1) with ATPgammaS
分子名称: Cyanophycin synthase, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Kawasaki, M, Miyakawa, T, Yang, J, Adachi, N, Fujii, A, Miyauchi, Y, Muramatsu, T, Moriya, T, Senda, T, Tanokura, M.
登録日2021-12-14
公開日2022-09-07
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Structural bases for aspartate recognition and polymerization efficiency of cyanobacterial cyanophycin synthetase.
Nat Commun, 13, 2022
7WAE
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Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1) with ATPgammaS, 4x(beta-Asp-Arg), and aspartate
分子名称: 4x(beta-Asp-Arg), ARGININE, ASPARTIC ACID, ...
著者Miyakawa, T, Yang, J, Kawasaki, M, Adachi, N, Fujii, A, Miyauchi, Y, Muramatsu, T, Moriya, T, Senda, T, Tanokura, M.
登録日2021-12-14
公開日2022-09-07
最終更新日2022-09-14
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Structural bases for aspartate recognition and polymerization efficiency of cyanobacterial cyanophycin synthetase.
Nat Commun, 13, 2022
7WKC
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BU of 7wkc by Molmil
A prototype protein nanocage minimized from carboxysomes with gated oxygen permeability
分子名称: Carboxysome shell vertex protein CcmL
著者Tan, H, Yang, J.
登録日2022-01-08
公開日2022-02-16
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献A prototype protein nanocage minimized from carboxysomes with gated oxygen permeability.
Proc.Natl.Acad.Sci.USA, 119, 2022
2O4X
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BU of 2o4x by Molmil
Crystal structure of human P100 tudor domain
分子名称: Staphylococcal nuclease domain-containing protein 1
著者Shaw, N, Zhao, M, Cheng, C, Xu, H, Yang, J, Silvennoinen, O, Rao, Z, Wang, B.C, Liu, Z.J.
登録日2006-12-05
公開日2007-02-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human P100 tudor domain
To be Published
6JCJ
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BU of 6jcj by Molmil
Structure of crolibulin in complex with tubulin
分子名称: (4R)-2,7,8-triamino-4-(3-bromo-4,5-dimethoxyphenyl)-4H-1-benzopyran-3-carbonitrile, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
著者Zhang, Z, Yang, J.
登録日2019-01-29
公開日2019-03-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular mechanism of crolibulin in complex with tubulin provides a rationale for drug design.
Biochem. Biophys. Res. Commun., 511, 2019
7YAV
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BU of 7yav by Molmil
Crystal structure of Diels-Alderase MaDA1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, MaDA1
著者Lei, X.G, Chen, R.C, Du, X.X, Yang, J, Fan, J.P, Guo, N.X, Ding, Q.
登録日2022-06-28
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of Diels-Alderase MaDA1
To Be Published
7YWX
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BU of 7ywx by Molmil
Structure of the human CCAN CENP-A alpha-satellite complex
分子名称: Centromere protein C, Centromere protein H, Centromere protein I, ...
著者Yatskevich, S, Muir, K.W, Bellini, D, Zhang, Z, Yang, J, Tischer, T, Predin, M, Dendooven, T, McLaughlin, S.H, Barford, D.
登録日2022-02-14
公開日2022-05-18
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome.
Science, 376, 2022
7YYH
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Structure of the human CCANdeltaT CENP-A alpha-satellite complex
分子名称: Centromere protein C, Centromere protein H, Centromere protein I, ...
著者Yatskevich, S, Muir, K.W, Bellini, D, Zhang, Z, Yang, J, Tischer, T, Predin, M, Dendooven, T, McLaughlin, S.H, Barford, D.
登録日2022-02-17
公開日2022-05-18
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome.
Science, 376, 2022
2LBM
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BU of 2lbm by Molmil
Solution structure of the ADD domain of ATRX complexed with histone tail H3 1-15 K9me3
分子名称: Transcriptional regulator ATRX, ZINC ION, histone tail H3 K9me3
著者Eustermann, S, Yang, J, Neuhaus, D.
登録日2011-04-08
公開日2011-06-29
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Combinatorial readout of histone H3 modifications specifies localization of ATRX to heterochromatin
Nat.Struct.Mol.Biol., 2011
6JAU
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BU of 6jau by Molmil
The complex structure of Pseudomonas aeruginosa MucA/MucB.
分子名称: CALCIUM ION, GLYCEROL, HEXAETHYLENE GLYCOL, ...
著者Li, T, He, L.H, Li, C.C, Liu, L, Peng, C.T, Shen, Y.L, Qin, X.F, Xiao, Q.J, Zhu, Y.B, Song, Y.J, Zhao, N.l, Zhao, C, Yang, J, Mu, X.Y, Huang, Q, Bao, R.
登録日2019-01-25
公開日2020-01-29
最終更新日2020-08-19
実験手法X-RAY DIFFRACTION (1.905 Å)
主引用文献Molecular basis of the lipid-induced MucA-MucB dissociation in Pseudomonas aeruginosa.
Commun Biol, 3, 2020
5Z1V
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BU of 5z1v by Molmil
Crystal structure of AvrPib
分子名称: AvrPib protein
著者Zhang, X, He, D, Zhao, Y.X, Taylor, I.A, Peng, Y.L, Yang, J, Liu, J.F.
登録日2017-12-28
公開日2018-09-05
最終更新日2018-10-03
実験手法X-RAY DIFFRACTION (1.661 Å)
主引用文献A positive-charged patch and stabilized hydrophobic core are essential for avirulence function of AvrPib in the rice blast fungus.
Plant J., 96, 2018
6ASY
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BU of 6asy by Molmil
BiP-ATP2
分子名称: 78 kDa glucose-regulated protein, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
著者Liu, Q, Yang, J, Zong, Y, Columbus, L, Zhou, L.
登録日2017-08-26
公開日2017-12-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Conformation transitions of the polypeptide-binding pocket support an active substrate release from Hsp70s.
Nat Commun, 8, 2017
7DVM
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BU of 7dvm by Molmil
DgkA structure in E.coli lipid bilayer
分子名称: Diacylglycerol kinase
著者Li, J, Yang, J.
登録日2021-01-13
公開日2022-04-13
最終更新日2023-09-27
実験手法SOLID-STATE NMR
主引用文献Structure of membrane diacylglycerol kinase in lipid bilayers.
Commun Biol, 4, 2021
8X6M
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BU of 8x6m by Molmil
Crystal Structure of Glycerol Dehydrogenase in the Presence of NAD+ and Glycerol
分子名称: GLYCEROL, Glycerol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Park, T, Kang, J.Y, Jin, M, Yang, J, Kim, H, Noh, C, Eom, S.H.
登録日2023-11-21
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into the octamerization of glycerol dehydrogenase.
Plos One, 19, 2024
5YMY
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BU of 5ymy by Molmil
The structure of the complex between Rpn13 and K48-diUb
分子名称: Proteasomal ubiquitin receptor ADRM1, Ubiquitin
著者Liu, Z, Dong, X, Gong, Z, Yi, H.W, Liu, K, Yang, J, Zhang, W.P, Tang, C.
登録日2017-10-22
公開日2019-03-13
最終更新日2019-04-24
実験手法SOLUTION NMR
主引用文献Structural basis for the recognition of K48-linked Ub chain by proteasomal receptor Rpn13.
Cell Discov, 5, 2019
5Z4U
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Crystal Structure of T2R-TTL complex with 7a3
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(4-ethoxyphenyl)-1-methyl-3-(3,4,5-trimethoxyphenyl)-1H-pyrazole, CALCIUM ION, ...
著者Lai, Q, Wang, Y, Yang, J, Yao, Y.
登録日2018-01-14
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Crystal Structure of T2R-TTL complex with 7a3
To Be Published
6JUI
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The atypical Myb-like protein Cdc5 contains two distinct nucleic acid-binding surfaces
分子名称: Pre-mRNA-splicing factor CEF1
著者Wang, C, Li, G, Li, M, Yang, J, Liu, J.
登録日2019-04-14
公開日2020-02-19
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Two distinct nucleic acid binding surfaces of Cdc5 regulate development.
Biochem.J., 476, 2019

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件を2024-08-07に公開中

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