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PDB: 207 results

2VB3
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BU of 2vb3 by Molmil
Crystal structure of Ag(I)CusF
Descriptor: CATION EFFLUX SYSTEM PROTEIN CUSF, SILVER ION
Authors:Xue, Y, Davis, A.V, Balakrishnan, G, Stasser, J.P, Staehlin, B.M, Focia, P, Spiro, T.G, Penner-Hahn, J.E, O'Halloran, T.V.
Deposit date:2007-09-06
Release date:2007-12-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Cu(I) Recognition Via Cation-Pi and Methionine Interactions in Cusf.
Nat.Chem.Biol., 4, 2008
3DA9
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BU of 3da9 by Molmil
Crystal structure of thrombin in complex with inhibitor
Descriptor: Hirudin peptide, SODIUM ION, Thrombin heavy chain, ...
Authors:Xue, Y, Hansson, S.K.
Deposit date:2008-05-29
Release date:2009-05-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Compounds binding to the S2-S3 pockets of thrombin.
J.Med.Chem., 52, 2009
2AFR
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BU of 2afr by Molmil
The Crystal Structure of Putative Precorrin Isomerase CbiC in Cobalamin Biosynthesis
Descriptor: cobalamin biosynthesis precorrin isomerase
Authors:Xue, Y, Wei, Z, Li, X.
Deposit date:2005-07-26
Release date:2006-04-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of putative precorrin isomerase CbiC in cobalamin biosynthesis
J.Struct.Biol., 153, 2006
4BTK
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BU of 4btk by Molmil
TTBK1 in complex with inhibitor
Descriptor: 4-[3-HYDROXYANILINO]-6,7-DIMETHOXYQUINAZOLINE, DIMETHYL SULFOXIDE, TAU-TUBULIN KINASE 1
Authors:Xue, Y, Wan, P, Hillertz, P, Schweikart, F, Zhao, Y, Wissler, L, Dekker, N.
Deposit date:2013-06-18
Release date:2013-09-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-Ray Structural Analysis of Tau-Tubulin Kinase 1 and its Interactions with Small Molecular Inhibitors.
Chemmedchem, 8, 2013
4BTM
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BU of 4btm by Molmil
TTBK1 in complex with inhibitor
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, SULFATE ION, ...
Authors:Xue, Y, Wan, P, Hillertz, P, Schweikart, F, Zhao, Y, Wissler, L, Dekker, N.
Deposit date:2013-06-18
Release date:2013-09-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:X-Ray Structural Analysis of Tau-Tubulin Kinase 1 and its Interactions with Small Molecular Inhibitors.
Chemmedchem, 8, 2013
4BTJ
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BU of 4btj by Molmil
TTBK1 in complex with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, ...
Authors:Xue, Y, Wan, P, Hillertz, P, Schweikart, F, Zhao, Y, Wissler, L, Dekker, N.
Deposit date:2013-06-18
Release date:2013-09-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:X-Ray Structural Analysis of Tau-Tubulin Kinase 1 and its Interactions with Small Molecular Inhibitors.
Chemmedchem, 8, 2013
5FP0
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BU of 5fp0 by Molmil
ligand complex structure of soluble epoxide hydrolase
Descriptor: BIFUNCTIONAL EPOXIDE HYDROLASE 2, DIMETHYL SULFOXIDE, N-cyclopentyl-2-[4-(trifluoromethyl)phenyl]-3H-benzimidazole-4-sulfonamide
Authors:Xue, Y, Olsson, T, Johansson, C.A, Oster, L, Beisel, H.G, Rohman, M, Karis, D, Backstrom, S.
Deposit date:2015-11-26
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Fragment Screening of Soluble Epoxide Hydrolase for Lead Generation-Structure-Based Hit Evaluation and Chemistry Exploration.
Chemmedchem, 11, 2016
3K7R
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BU of 3k7r by Molmil
Crystal structure of [TM][CuAtx1]3
Descriptor: COPPER (II) ION, D-MALATE, Metal homeostasis factor ATX1, ...
Authors:Xue, Y, Alvarez, H.M, Robinson, C.D, Mondragon, A, O'Halloran, T.V.
Deposit date:2009-10-13
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Tetrathiomolybdate inhibits copper trafficking proteins through metal cluster formation.
Science, 327, 2010
2AFV
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BU of 2afv by Molmil
The Crystal Structure of Putative Precorrin Isomerase CbiC in Cobalamin Biosynthesis
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
Authors:Xue, Y, Wei, Z.
Deposit date:2005-07-26
Release date:2006-04-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of putative precorrin isomerase CbiC in cobalamin biosynthesis
J.Struct.Biol., 153, 2006
6F3G
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BU of 6f3g by Molmil
IRAK4 IN COMPLEX WITH inhibitor
Descriptor: Interleukin-1 receptor-associated kinase 4, SULFATE ION, ~{N}4,~{N}4-dimethyl-~{N}1-(5-propan-2-ylpyrrolo[3,2-d]pyrimidin-4-yl)cyclohexane-1,4-diamine
Authors:Xue, Y, Degorce, S.L, Robb, G.R, Ferguson, A.D.
Deposit date:2017-11-28
Release date:2018-05-23
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Optimization of permeability in a series of pyrrolotriazine inhibitors of IRAK4.
Bioorg. Med. Chem., 26, 2018
6F3D
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BU of 6f3d by Molmil
IRAK4 IN COMPLEX WITH inhibitor
Descriptor: 4-[4-[[4-(dimethylamino)cyclohexyl]amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]cyclohexane-1-carboxamide, Interleukin-1 receptor-associated kinase 4, SULFATE ION
Authors:Xue, Y, Degorce, S.L, Robb, G.R, Ferguson, A.D.
Deposit date:2017-11-28
Release date:2018-05-23
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Optimization of permeability in a series of pyrrolotriazine inhibitors of IRAK4.
Bioorg. Med. Chem., 26, 2018
6F3I
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BU of 6f3i by Molmil
IRAK4 IN COMPLEX WITH inhibitor
Descriptor: (3~{R})-3-[4-[[4-(4-ethanoylpiperazin-1-yl)cyclohexyl]amino]pyrrolo[2,1-f][1,2,4]triazin-5-yl]butanamide, Interleukin-1 receptor-associated kinase 4, SULFATE ION
Authors:Xue, Y, Degorce, S.L, Robb, G.R, Ferguson, A.D.
Deposit date:2017-11-28
Release date:2018-05-23
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Optimization of permeability in a series of pyrrolotriazine inhibitors of IRAK4.
Bioorg. Med. Chem., 26, 2018
5G42
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BU of 5g42 by Molmil
Ligand complex of RORg LBD
Descriptor: 5-chloranyl-2,3-dihydroindole-1-carboxamide, NUCLEAR RECEPTOR ROR-GAMMA, RORG, ...
Authors:Xue, Y, Guo, H, Hillertz, P.
Deposit date:2016-05-04
Release date:2016-08-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Fragment Screening of Rorgammat Using Cocktail Crystallography: Identification of Simultaneous Binding of Multiple Fragments.
Chemmedchem, 11, 2016
5G45
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BU of 5g45 by Molmil
Ligand complex of RORg LBD
Descriptor: 8-AMINO-3-QUINOLINOL, DIMETHYL SULFOXIDE, NUCLEAR RECEPTOR ROR-GAMMA, ...
Authors:Xue, Y, Guo, H, Hillertz, P.
Deposit date:2016-05-04
Release date:2016-08-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Fragment Screening of Rorgammat Using Cocktail Crystallography: Identification of Simultaneous Binding of Multiple Fragments.
Chemmedchem, 11, 2016
5G46
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BU of 5g46 by Molmil
Ligand complex of RORg LBD
Descriptor: 2-ETHYL-4(1H)-QUINOLINONE, NUCLEAR RECEPTOR ROR-GAMMA, RORG, ...
Authors:Xue, Y, Guo, H, Hillertz, P.
Deposit date:2016-05-04
Release date:2016-08-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Fragment Screening of Rorgammat Using Cocktail Crystallography: Identification of Simultaneous Binding of Multiple Fragments.
Chemmedchem, 11, 2016
5G43
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BU of 5g43 by Molmil
Ligand complex of RORg LBD
Descriptor: 2-(1-PIPERIDINYL)-1,3-THIAZOL-4-AMINE, NUCLEAR RECEPTOR ROR-GAMMA, RORG
Authors:Xue, Y, Guo, H, Hillertz, P.
Deposit date:2016-05-04
Release date:2016-08-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Fragment Screening of Rorgammat Using Cocktail Crystallography: Identification of Simultaneous Binding of Multiple Fragments.
Chemmedchem, 11, 2016
5G44
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BU of 5g44 by Molmil
Ligand complex of RORg LBD
Descriptor: (4-pyrimidin-5-ylphenyl)methanol, 4-amino-N-(1,3-thiazol-2-yl)benzenesulfonamide, 8-methoxy-2,3-dimethylquinoxalin-5-ol, ...
Authors:Xue, Y, Guo, H, Hillertz, P.
Deposit date:2016-05-04
Release date:2016-08-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Fragment Screening of Rorgammat Using Cocktail Crystallography: Identification of Simultaneous Binding of Multiple Fragments.
Chemmedchem, 11, 2016
4A5T
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BU of 4a5t by Molmil
STRUCTURAL BASIS FOR THE CONFORMATIONAL MODULATION
Descriptor: CHLORIDE ION, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, PLASMINOGEN
Authors:Xue, Y, Bodin, C, Olsson, K.
Deposit date:2011-10-28
Release date:2012-05-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Crystal Structure of the Native Plasminogen Reveals an Activation-Resistant Compact Conformation.
J. Thromb. Haemost., 10, 2012
2BDY
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BU of 2bdy by Molmil
thrombin in complex with inhibitor
Descriptor: Hirudin IIIB', N-(4-CARBAMIMIDOYL-BENZYL)-2-[2-HYDROXY-6-METHYL-3-(NAPHTHALENE-1-SULFONYLAMINO)-PHENYL]-ACETAMIDE, SODIUM ION, ...
Authors:Xue, Y.
Deposit date:2005-10-21
Release date:2006-10-24
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Phenolic P2/P3 core motif as thrombin inhibitors--design, synthesis, and X-ray co-crystal structure.
Bioorg.Med.Chem.Lett., 16, 2006
2EXC
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BU of 2exc by Molmil
Inhibitor complex of JNK3
Descriptor: Mitogen-activated protein kinase 10, N-{2'-[(4-FLUOROPHENYL)AMINO]-4,4'-BIPYRIDIN-2-YL}-4-METHOXYCYCLOHEXANECARBOXAMIDE
Authors:Xue, Y.
Deposit date:2005-11-08
Release date:2006-11-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Inhibitor complex of JNK3
To be Published
2GDE
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BU of 2gde by Molmil
Thrombin in complex with inhibitor
Descriptor: (R)-3-((2S,3R)-1-((2S,3AR,5S,6S,7AS)-2-(2-(1-CARBAMIMIDOYL-2,5-DIHYDRO-1H-PYRROL-3-YL)ETHYLCARBAMOYL)-5,6-DIHYDROXYOCTAHYDRO-1H-INDOL-1-YL)-3-CHLORO-4-METHYL-1-OXOPENTAN-2-YLAMINO)-2-METHOXY-3-OXOPROPYL HYDROGEN SULFATE, Hirudin, SODIUM ION, ...
Authors:Xue, Y.
Deposit date:2006-03-16
Release date:2007-03-20
Last modified:2013-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Total synthesis and structural confirmation of chlorodysinosin A.
J.Am.Chem.Soc., 128, 2006
2JFX
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BU of 2jfx by Molmil
Crystal structure of Helicobacter pylori glutamate racemase in complex with D-Glutamate
Descriptor: D-GLUTAMIC ACID, GLUTAMATE RACEMASE
Authors:Xue, Y, Lundqvist, T.
Deposit date:2007-02-06
Release date:2007-07-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Exploitation of Structural and Regulatory Diversity in Glutamate Racemases
Nature, 447, 2007
4BAM
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BU of 4bam by Molmil
Thrombin in complex with inhibitor
Descriptor: (2S)-N-[(4-carbamimidoylphenyl)methyl]-1-[(2R)-2-cyclohexyl-2-[[2-(dimethylamino)-2-oxidanylidene-ethyl]amino]ethanoyl]azetidine-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, HIRUDIN VARIANT-1, ...
Authors:Xue, Y, Musil, D.
Deposit date:2012-09-14
Release date:2013-01-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Identification of Structure-Kinetic and Structure-Thermodynamic Relationships for Thrombin Inhibitors.
Biochemistry, 52, 2013
4BAH
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BU of 4bah by Molmil
Thrombin in complex with inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HIRUDIN VARIANT-1, SODIUM ION, ...
Authors:Xue, Y, Musil, D.
Deposit date:2012-09-14
Release date:2013-01-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Identification of Structure-Kinetic and Structure-Thermodynamic Relationships for Thrombin Inhibitors.
Biochemistry, 52, 2013
4BAQ
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BU of 4baq by Molmil
Thrombin in complex with inhibitor
Descriptor: (2S)-N-[(4-carbamimidoylphenyl)methyl]-1-[(2R)-2-cyclohexyl-2-[[2-(ethylamino)-2-oxidanylidene-ethyl]amino]ethanoyl]azetidine-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, HIRUDIN VARIANT-1, ...
Authors:Xue, Y, Musil, D.
Deposit date:2012-09-14
Release date:2013-01-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Identification of Structure-Kinetic and Structure-Thermodynamic Relationships for Thrombin Inhibitors.
Biochemistry, 52, 2013

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