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PDB: 460 results

7C4I
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BU of 7c4i by Molmil
High resolution structure of BRPF1 Bromo Domain from Biortus
Descriptor: GLYCEROL, POTASSIUM ION, Peregrin
Authors:Wang, F, Lin, D, Lv, Z, Zhu, B.
Deposit date:2020-05-18
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:High resolution structure of BRPF1 Bromo Domain from Biortus
To Be Published
5EEH
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BU of 5eeh by Molmil
Crystal structure of carminomycin-4-O-methyltransferase DnrK in complex with SAH and 2-chloro-4-nitrophenol
Descriptor: 2-chloranyl-4-nitro-phenol, Carminomycin 4-O-methyltransferase DnrK, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Wang, F, Singh, S, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-10-22
Release date:2015-12-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Functional AdoMet Isosteres Resistant to Classical AdoMet Degradation Pathways.
Acs Chem.Biol., 11, 2016
5EJL
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BU of 5ejl by Molmil
MrkH, A novel c-di-GMP dependence transcription regulatory factor.
Descriptor: 1,2-ETHANEDIOL, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Klebsiella pneumoniae genome assembly NOVST, ...
Authors:Wang, F, Zhu, D, Gu, L.
Deposit date:2015-11-02
Release date:2016-10-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The PilZ domain of MrkH represents a novel DNA binding motif
Protein Cell, 7, 2016
5EEG
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BU of 5eeg by Molmil
Crystal structure of carminomycin-4-O-methyltransferase DnrK in complex with tetrazole-SAH
Descriptor: (2~{R},3~{R},4~{S},5~{S})-2-(6-aminopurin-9-yl)-5-[[(3~{S})-3-azanyl-3-(1~{H}-1,2,3,4-tetrazol-5-yl)propyl]sulfanylmethyl]oxolane-3,4-diol, Carminomycin 4-O-methyltransferase DnrK
Authors:Wang, F, Singh, S, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-10-22
Release date:2015-12-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.255 Å)
Cite:Functional AdoMet Isosteres Resistant to Classical AdoMet Degradation Pathways.
Acs Chem.Biol., 11, 2016
7RX4
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BU of 7rx4 by Molmil
Cryo-EM reconstruction of AS2 nanotube (Form II like)
Descriptor: AS2 peptide
Authors:Wang, F, Gnewou, O.M, Solemanifar, A, Xu, C, Egelman, E.H, Conticello, V.P.
Deposit date:2021-08-21
Release date:2021-09-08
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM of Helical Polymers.
Chem.Rev., 122, 2022
7E9W
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BU of 7e9w by Molmil
The Crystal Structure of D-psicose-3-epimerase from Biortus.
Descriptor: D-psicose 3-epimerase, GLYCEROL, MANGANESE (II) ION
Authors:Wang, F, Xu, C, Qi, J, Zhang, M, Tian, F, Wang, M.
Deposit date:2021-03-05
Release date:2021-03-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of D-psicose-3-epimerase from Biortus.
To Be Published
7E0M
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BU of 7e0m by Molmil
Crystal structure of phospholipase D
Descriptor: Phospholipase, SULFATE ION
Authors:Wang, F.H.
Deposit date:2021-01-28
Release date:2021-12-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal Structure of a Phospholipase D from the Plant-Associated Bacteria Serratia plymuthica Strain AS9 Reveals a Unique Arrangement of Catalytic Pocket.
Int J Mol Sci, 22, 2021
5GWZ
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BU of 5gwz by Molmil
The structure of Porcine epidemic diarrhea virus main protease in complex with an inhibitor
Descriptor: N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE, PEDV main protease
Authors:Wang, F, Chen, C, Yang, K, Liu, X, Liu, H, Xu, Y, Chen, X, Liu, X, Cai, Y, Yang, H.
Deposit date:2016-09-14
Release date:2017-03-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.444 Å)
Cite:Michael Acceptor-Based Peptidomimetic Inhibitor of Main Protease from Porcine Epidemic Diarrhea Virus
J. Med. Chem., 60, 2017
6JWE
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BU of 6jwe by Molmil
structure of RET G-quadruplex in complex with colchicine
Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3'), N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide
Authors:Wang, F, Wang, C, Liu, Y, Lan, W.X, Li, Y.M, Wang, R.X, Cao, C.
Deposit date:2019-04-20
Release date:2020-02-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Colchicine selective interaction with oncogene RET G-quadruplex revealed by NMR.
Chem.Commun.(Camb.), 56, 2020
6JWD
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BU of 6jwd by Molmil
structure of RET G-quadruplex in complex with berberine
Descriptor: BERBERINE, DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3')
Authors:Wang, F, Wang, C, Liu, Y, Lan, W.X, Li, Y.M, Wang, R.X, Cao, C.
Deposit date:2019-04-19
Release date:2020-04-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Colchicine selective interaction with oncogene RET G-quadruplex revealed by NMR.
Chem.Commun.(Camb.), 56, 2020
7DE0
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BU of 7de0 by Molmil
Crystal structure of FtmOx1 Y224F mutation
Descriptor: FE (III) ION, FtmOx1
Authors:Wang, F, Gao, Y.Q, Gan, J.H, Cao, C.Y.
Deposit date:2020-10-31
Release date:2021-11-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based Insights into Mechanism of Endoperoxidase FtmOx1 Catalyzed Reactions
Catalysis Science And Technology, 2023
8GZB
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BU of 8gzb by Molmil
SARS-CoV-2 3CLpro
Descriptor: 1,2-ETHANEDIOL, 2-(4-chlorophenyl)-1,3,4-oxadiazole, 3C-like proteinase nsp5
Authors:Wang, F, Cen, Y.X, Tian, P.
Deposit date:2022-09-26
Release date:2023-09-27
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Nature-inspired catalytic asymmetric rearrangement of cyclopropylcarbinyl cation.
Sci Adv, 9, 2023
5GWY
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BU of 5gwy by Molmil
Structure of Main Protease from Human Coronavirus NL63: Insights for Wide Spectrum Anti-Coronavirus Drug Design
Descriptor: N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE, main protease
Authors:Wang, F, Chen, C, Tan, W, Yang, K, Yang, H.
Deposit date:2016-09-14
Release date:2017-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.852 Å)
Cite:Structure of Main Protease from Human Coronavirus NL63: Insights for Wide Spectrum Anti-Coronavirus Drug Design.
Sci Rep, 6, 2016
4FZR
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BU of 4fzr by Molmil
Crystal Structure of SsfS6, Streptomyces sp. SF2575 glycosyltransferase
Descriptor: SsfS6
Authors:Wang, F, Zhou, M, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2012-07-07
Release date:2012-07-25
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Crystal structure of SsfS6, the putative C-glycosyltransferase involved in SF2575 biosynthesis.
Proteins, 81, 2013
4G2T
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BU of 4g2t by Molmil
Crystal Structure of Streptomyces sp. SF2575 glycosyltransferase SsfS6, complexed with thymidine diphosphate
Descriptor: SsfS6, THYMIDINE-5'-DIPHOSPHATE
Authors:Wang, F, Zhou, M, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2012-07-12
Release date:2012-07-25
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Crystal structure of SsfS6, the putative C-glycosyltransferase involved in SF2575 biosynthesis.
Proteins, 81, 2013
2HKB
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BU of 2hkb by Molmil
NMR Structure of the B-DNA Dodecamer CTCGGCGCCATC
Descriptor: 5'-D(*CP*TP*CP*GP*GP*CP*GP*CP*CP*AP*TP*C)-3', 5'-D(*GP*AP*TP*GP*GP*CP*GP*CP*CP*GP*AP*G)-3'
Authors:Wang, F, DeMuro, N.E, Elmquist, C.E, Stover, J.S, Rizzo, C.J, Stone, M.P.
Deposit date:2006-07-03
Release date:2006-10-03
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Base-displaced intercalated structure of the food mutagen 2-amino-3-methylimidazo[4,5-f]quinoline in the recognition sequence of the NarI restriction enzyme, a hotspot for -2 bp deletions.
J.Am.Chem.Soc., 128, 2006
7ESF
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BU of 7esf by Molmil
The Crystal Structure of human MTH1 from Biortus
Descriptor: 7,8-dihydro-8-oxoguanine triphosphatase, DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL
Authors:Wang, F, Cheng, W, Shang, H, Wang, R, Zhang, B, Tian, F.
Deposit date:2021-05-10
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The Crystal Structure of human MTH1 from Biortus
To Be Published
8J67
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BU of 8j67 by Molmil
Crystal structure of Toxoplasma gondii M2AP
Descriptor: MIC2-associated protein
Authors:Wang, F.F, Zhang, D.J, Zhang, S, Springer, T.A, Song, G.J.
Deposit date:2023-04-24
Release date:2023-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural insights into MIC2 recognition by MIC2-associated protein in Toxoplasma gondii.
Commun Biol, 6, 2023
3FCA
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BU of 3fca by Molmil
Genetic Incorporation of a Metal-ion Chelating Amino Acid into proteins as biophysical probe
Descriptor: Cysteine synthase, ZINC ION
Authors:Wang, F, Lee, H, Spraggon, G, Schultz, P.G.
Deposit date:2008-11-21
Release date:2009-02-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.149 Å)
Cite:Genetic incorporation of a metal-ion chelating amino acid into proteins as a biophysical probe.
J.Am.Chem.Soc., 131, 2009
3FNE
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BU of 3fne by Molmil
Crystal structure of InhA bound to triclosan derivative 17
Descriptor: 2-(2,4-DICHLOROPHENOXY)-5-(PYRIDIN-2-YLMETHYL)PHENOL, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Wang, F.
Deposit date:2008-12-24
Release date:2009-01-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Triclosan Derivatives: Towards Potent Inhibitors of Drug-Sensitive and Drug-Resistant Mycobacterium tuberculosis.
Chemmedchem, 4, 2009
3FNF
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BU of 3fnf by Molmil
Crystal structure of InhA bound to triclosan derivative
Descriptor: 5-benzyl-2-(2,4-dichlorophenoxy)phenol, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Wang, F.
Deposit date:2008-12-24
Release date:2009-01-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Triclosan Derivatives: Towards Potent Inhibitors of Drug-Sensitive and Drug-Resistant Mycobacterium tuberculosis.
Chemmedchem, 4, 2009
5VXX
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BU of 5vxx by Molmil
Cryo-EM reconstruction of Neisseria gonorrhoeae Type IV pilus
Descriptor: Fimbrial protein, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, alpha-D-galactopyranose-(1-3)-2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucopyranose
Authors:Wang, F, Orlova, A, Altindal, T, Craig, L, Egelman, E.H.
Deposit date:2017-05-24
Release date:2017-07-12
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Cryoelectron Microscopy Reconstructions of the Pseudomonas aeruginosa and Neisseria gonorrhoeae Type IV Pili at Sub-nanometer Resolution.
Structure, 25, 2017
5WJY
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BU of 5wjy by Molmil
Cryo-EM structure of B. subtilis flagellar filaments S285P
Descriptor: Flagellin
Authors:Wang, F, Burrage, A.M, Kearns, D.B, Egelman, E.H.
Deposit date:2017-07-24
Release date:2017-10-25
Last modified:2020-01-01
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:A structural model of flagellar filament switching across multiple bacterial species.
Nat Commun, 8, 2017
5WJU
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BU of 5wju by Molmil
Cryo-EM structure of B. subtilis flagellar filaments A39V, N133H
Descriptor: Flagellin
Authors:Wang, F, Burrage, A.M, Kearns, D.B, Egelman, E.H.
Deposit date:2017-07-24
Release date:2017-10-25
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:A structural model of flagellar filament switching across multiple bacterial species.
Nat Commun, 8, 2017
5WJZ
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Cryo-EM structure of B. subtilis flagellar filaments E115G
Descriptor: Flagellin
Authors:Wang, F, Burrage, A.M, Orlova, A, Kearns, D.B, Egelman, E.H.
Deposit date:2017-07-24
Release date:2017-10-25
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:A structural model of flagellar filament switching across multiple bacterial species.
Nat Commun, 8, 2017

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