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PDB: 480 results

7RX4
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BU of 7rx4 by Molmil
Cryo-EM reconstruction of AS2 nanotube (Form II like)
Descriptor: AS2 peptide
Authors:Wang, F, Gnewou, O.M, Solemanifar, A, Xu, C, Egelman, E.H, Conticello, V.P.
Deposit date:2021-08-21
Release date:2021-09-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM of Helical Polymers.
Chem.Rev., 122, 2022
4ZAS
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BU of 4zas by Molmil
Crystal structure of sugar aminotransferase CalS13 from Micromonospora echinospora
Descriptor: CalS13, SULFATE ION, THYMIDINE-5'-DIPHOSPHATE, ...
Authors:Wang, F, Singh, S, Miller, M.D, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-04-13
Release date:2015-04-29
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structure characterization of sugar aminotransferases CalS13 and WecE provides the basis for a unifying structural model for stereochemical outcome.
To Be Published
8FJ5
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BU of 8fj5 by Molmil
Structure of the Haloferax volcanii archaeal type IV pilus
Descriptor: Pilin_N domain-containing protein
Authors:Wang, F, Kreutzberger, M.A, Baquero, D.P, Krupovic, M, Egelman, E.H.
Deposit date:2022-12-19
Release date:2023-06-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
6NAV
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BU of 6nav by Molmil
Cryo-EM reconstruction of Sulfolobus islandicus LAL14/1 Pilus
Descriptor: M9UD72
Authors:Wang, F, Cvirkaite-Krupovic, V, Prangishvili, D, Krupovic, M, Egelman, E.H.
Deposit date:2018-12-06
Release date:2019-05-08
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:An extensively glycosylated archaeal pilus survives extreme conditions.
Nat Microbiol, 4, 2019
8WGQ
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BU of 8wgq by Molmil
The Crystal Structure of L-asparaginase from Biortus.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, L-asparaginase
Authors:Wang, F, Cheng, W, Lv, Z, Ju, C, Wang, J.
Deposit date:2023-09-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Crystal Structure of L-asparaginase from Biortus.
To Be Published
8X70
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BU of 8x70 by Molmil
The Crystal Structure of IFI16 from Biortus.
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, Gamma-interferon-inducible protein 16, ...
Authors:Wang, F, Cheng, W, Lv, Z, Meng, Q, Wang, J.
Deposit date:2023-11-22
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of IFI16 from Biortus.
To Be Published
8XOX
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BU of 8xox by Molmil
The Crystal Structure of FAK2 from Biortus.
Descriptor: 1,2-ETHANEDIOL, N-methyl-N-{3-[({2-[(2-oxo-2,3-dihydro-1H-indol-5-yl)amino]-5-(trifluoromethyl)pyrimidin-4-yl}amino)methyl]pyridin-2-yl}methanesulfonamide, Protein-tyrosine kinase 2-beta
Authors:Wang, F, Cheng, W, Lv, Z, Ju, C, Wang, J.
Deposit date:2024-01-02
Release date:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Crystal Structure of FAK2 from Biortus.
To Be Published
8XPN
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BU of 8xpn by Molmil
The Crystal Structure of USP8 from Biortus.
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Ubiquitin carboxyl-terminal hydrolase 8, ...
Authors:Wang, F, Cheng, W, Yuan, Z, Lin, D, Wang, J.
Deposit date:2024-01-04
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of USP8 from Biortus.
To Be Published
6OJ0
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BU of 6oj0 by Molmil
Cryo-EM reconstruction of Sulfolobus polyhedral virus 1 (SPV1)
Descriptor: Structural protein VP4, Uncharacterized protein
Authors:Wang, F, Liu, Y, Conway, J.F, Krupovic, M, Prangishvili, D, Egelman, E.H.
Deposit date:2019-04-10
Release date:2019-10-02
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A packing for A-form DNA in an icosahedral virus.
Proc.Natl.Acad.Sci.USA, 116, 2019
6JWE
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BU of 6jwe by Molmil
structure of RET G-quadruplex in complex with colchicine
Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3'), N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide
Authors:Wang, F, Wang, C, Liu, Y, Lan, W.X, Li, Y.M, Wang, R.X, Cao, C.
Deposit date:2019-04-20
Release date:2020-02-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Colchicine selective interaction with oncogene RET G-quadruplex revealed by NMR.
Chem.Commun.(Camb.), 56, 2020
6JWD
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BU of 6jwd by Molmil
structure of RET G-quadruplex in complex with berberine
Descriptor: BERBERINE, DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3')
Authors:Wang, F, Wang, C, Liu, Y, Lan, W.X, Li, Y.M, Wang, R.X, Cao, C.
Deposit date:2019-04-19
Release date:2020-04-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Colchicine selective interaction with oncogene RET G-quadruplex revealed by NMR.
Chem.Commun.(Camb.), 56, 2020
7LQH
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BU of 7lqh by Molmil
Cryo-EM of KFE8 thinner nanotube (class 2, 2-sub-1)
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021
7LQI
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BU of 7lqi by Molmil
Cryo-EM of KFE8 thicker nanotube
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021
7LQF
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BU of 7lqf by Molmil
Cryo-EM of KFE8 ribbon filament
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021
7LQE
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BU of 7lqe by Molmil
Cryo-EM of 1-protofilament of the KFE8 thinner nanotube
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021
7LQG
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BU of 7lqg by Molmil
Cryo-EM of the KFE8 thinner nanotube (class 1, C2)
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021
8WGF
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BU of 8wgf by Molmil
The Crystal Structure of JNK3 from Biortus.
Descriptor: MAGNESIUM ION, Mitogen-activated protein kinase 10, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Wang, F, Cheng, W, Lv, Z, Ju, C, Wang, J.
Deposit date:2023-09-21
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Crystal Structure of JNK3 from Biortus.
To Be Published
4ZAH
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BU of 4zah by Molmil
Crystal structure of sugar aminotransferase WecE with External Aldimine VII from Escherichia coli K-12
Descriptor: [[(2R,3S,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3R,4S,5R,6R)-6-methyl-5-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3,4-bis(oxidanyl)oxan-2-yl] hydrogen phosphate, dTDP-4-amino-4,6-dideoxygalactose transaminase
Authors:Wang, F, Singh, S, Cao, H, Xu, W, Miller, M.D, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-04-13
Release date:2015-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural Basis for the Stereochemical Control of Amine Installation in Nucleotide Sugar Aminotransferases.
Acs Chem.Biol., 10, 2015
8HC0
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BU of 8hc0 by Molmil
Crystal structure of the extracellular domains of GPR110
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Adhesion G-protein coupled receptor F1, alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Wang, F.F, Song, G.J.
Deposit date:2022-11-01
Release date:2023-09-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of the Extracellular Domains of GPR110.
J.Mol.Biol., 435, 2023
7WKU
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BU of 7wku by Molmil
Structure of PDCoV Mpro in complex with an inhibitor
Descriptor: N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE, Peptidase C30
Authors:Wang, F.H, Yang, H.T.
Deposit date:2022-01-11
Release date:2022-05-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Structure of the Porcine Deltacoronavirus Main Protease Reveals a Conserved Target for the Design of Antivirals.
Viruses, 14, 2022
5D6X
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BU of 5d6x by Molmil
Crystal structure of double tudor domain of human lysine demethylase KDM4A
Descriptor: Lysine-specific demethylase 4A, SULFATE ION
Authors:Wang, F, Su, Z, Denu, J.M, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-08-13
Release date:2015-11-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.153 Å)
Cite:Reader domain specificity and lysine demethylase-4 family function.
Nat Commun, 7, 2016
5EEH
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BU of 5eeh by Molmil
Crystal structure of carminomycin-4-O-methyltransferase DnrK in complex with SAH and 2-chloro-4-nitrophenol
Descriptor: 2-chloranyl-4-nitro-phenol, Carminomycin 4-O-methyltransferase DnrK, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Wang, F, Singh, S, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-10-22
Release date:2015-12-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Functional AdoMet Isosteres Resistant to Classical AdoMet Degradation Pathways.
Acs Chem.Biol., 11, 2016
5D6Y
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BU of 5d6y by Molmil
Crystal structure of double tudor domain of human lysine demethylase KDM4A complexed with histone H3K23me3
Descriptor: Lysine-specific demethylase 4A, peptide H3K23me3 (19-28)
Authors:Wang, F, Su, Z, Miller, M.D, Denu, J.M, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-08-13
Release date:2016-02-10
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.287 Å)
Cite:Reader domain specificity and lysine demethylase-4 family function.
Nat Commun, 7, 2016
5D6W
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BU of 5d6w by Molmil
Crystal structure of double tudor domain of human lysine demethylase KDM4A
Descriptor: Lysine-specific demethylase 4A, S,R MESO-TARTARIC ACID
Authors:Wang, F, Su, Z, Denu, J.M, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-08-13
Release date:2015-11-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:Reader domain specificity and lysine demethylase-4 family function.
Nat Commun, 7, 2016
5EJL
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BU of 5ejl by Molmil
MrkH, A novel c-di-GMP dependence transcription regulatory factor.
Descriptor: 1,2-ETHANEDIOL, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Klebsiella pneumoniae genome assembly NOVST, ...
Authors:Wang, F, Zhu, D, Gu, L.
Deposit date:2015-11-02
Release date:2016-10-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The PilZ domain of MrkH represents a novel DNA binding motif
Protein Cell, 7, 2016

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