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PDB: 206 results

6UM2
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BU of 6um2 by Molmil
Structure of M-6-P/IGFII Receptor and IGFII complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cation-independent mannose-6-phosphate receptor, Insulin-like growth factor II
Authors:Wang, R, Qi, X, Li, X.
Deposit date:2019-10-08
Release date:2020-02-26
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.32 Å)
Cite:Marked structural rearrangement of mannose 6-phosphate/IGF2 receptor at different pH environments
Sci Adv, 6, 2020
7SHN
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BU of 7shn by Molmil
Cryo-EM structure of oleoyl-CoA-bound human peroxisomal fatty acid transporter ABCD1
Descriptor: ATP-binding cassette sub-family D member 1, S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name)
Authors:Wang, R, Li, X.
Deposit date:2021-10-09
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of acyl-CoA transport across the peroxisomal membrane by human ABCD1.
Cell Res., 32, 2022
7SHM
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BU of 7shm by Molmil
Cryo-EM structure of ATP-bound human peroxisomal fatty acid transporter ABCD1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family D member 1
Authors:Wang, R, Li, X.
Deposit date:2021-10-09
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structural basis of acyl-CoA transport across the peroxisomal membrane by human ABCD1.
Cell Res., 32, 2022
7KHR
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BU of 7khr by Molmil
Cryo-EM structure of bafilomycin A1-bound intact V-ATPase from bovine brain
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (5R)-2,4-dideoxy-1-C-{(2S,3R,4S)-3-hydroxy-4-[(2R,3S,4E,6E,9R,10S,11R,12E,14Z)-10-hydroxy-3,15-dimethoxy-7,9,11,13-tetramethyl-16-oxo-1-oxacyclohexadeca-4,6,12,14-tetraen-2-yl]pentan-2-yl}-4-methyl-5-propan-2-yl-alpha-D-threo-pentopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, R, Li, X.
Deposit date:2020-10-21
Release date:2021-03-17
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Molecular basis of V-ATPase inhibition by bafilomycin A1.
Nat Commun, 12, 2021
3IXS
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BU of 3ixs by Molmil
Ring1B C-terminal domain/RYBP C-terminal domain Complex
Descriptor: 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, E3 ubiquitin-protein ligase RING2, ...
Authors:Wang, R, Taylor, A.B, Kim, C.A.
Deposit date:2009-09-04
Release date:2010-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Polycomb Group Targeting through Different Binding Partners of RING1B C-Terminal Domain.
Structure, 18, 2010
5H43
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BU of 5h43 by Molmil
Structural and mechanistical studies of the nuclear import by Importin-alpha
Descriptor: Histone acetyltransferase KAT8, Importin subunit alpha-1
Authors:Wang, R, Li, Y.
Deposit date:2016-10-28
Release date:2017-10-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the nuclear import of the histone acetyltransferase males-absent-on-the-first by importin alpha 1
Traffic, 19, 2018
5GO0
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BU of 5go0 by Molmil
Solution structure of nedd8 from Trypanosoma brucei
Descriptor: Ubiquitin, putative
Authors:Wang, R, Liao, S, Zhang, J, Tu, X.
Deposit date:2016-07-25
Release date:2017-07-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of nedd8 from Trypanosoma brucei
To Be Published
4G59
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BU of 4g59 by Molmil
Crystal structure of the murine cytomegalovirus MHC-I homolog m152 with ligand RAE-1 gamma
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, M152 protein, Retinoic acid early-inducible protein 1-gamma
Authors:Wang, R, Natarajan, K, Margulies, D.H.
Deposit date:2012-07-17
Release date:2012-12-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural basis of mouse cytomegalovirus m152/gp40 interaction with RAE1gamma reveals a paradigm for MHC/MHC interaction in immune evasion.
Proc.Natl.Acad.Sci.USA, 109, 2012
7SCE
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BU of 7sce by Molmil
Ternary complex of fixed-arm Trx-3ost5 (I299E) with 8mer-2 octasaccharide substrate and co-factor product PAP
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, Thioredoxin 1,Heparan sulfate glucosamine 3-O-sulfotransferase 5
Authors:Wander, R, Kaminski, A.M, Krahn, J.M, Liu, J, Pedersen, L.C.
Deposit date:2021-09-27
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural and Substrate Specificity Analysis of 3-O-Sulfotransferase Isoform 5 to Synthesize Heparan Sulfate
Acs Catalysis, 11, 2021
8BB7
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BU of 8bb7 by Molmil
Crystal structure of Mouse Plexin-B1 (20-535) in complex with VHH15
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-B1, VHH15 Nanobody
Authors:Cowan, R, Hall, G, Carr, M.
Deposit date:2022-10-12
Release date:2023-05-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Nanobody inhibitors of Plexin-B1 identify allostery in plexin-semaphorin interactions and signaling.
J.Biol.Chem., 299, 2023
8BF4
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BU of 8bf4 by Molmil
Crystal structure of Mouse Plexin-B1 (20-535) in complex with VHH15 and VHH14
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Cowan, R, Hall, G, Carr, M.
Deposit date:2022-10-24
Release date:2023-05-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Nanobody inhibitors of Plexin-B1 identify allostery in plexin-semaphorin interactions and signaling.
J.Biol.Chem., 299, 2023
7SCD
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BU of 7scd by Molmil
Ternary complex of fixed-arm Trx-3ost5 (I299E) with 8mer-1 octasaccharide substrate and co-factor product PAP
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, Thioredoxin 1,Heparan sulfate glucosamine 3-O-sulfotransferase 5
Authors:Wander, R, Kaminski, A.M, Krahn, J.M, Liu, J, Pedersen, L.C.
Deposit date:2021-09-27
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and Substrate Specificity Analysis of 3-O-Sulfotransferase Isoform 5 to Synthesize Heparan Sulfate
Acs Catalysis, 11, 2021
4PUT
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BU of 4put by Molmil
Crystal structure of the Arabidopsis thaliana TOP2 oligopeptidase
Descriptor: CHLORIDE ION, Cytosolic oligopeptidase A, ZINC ION
Authors:Wang, R, Rajagopalan, K, Tong, L.
Deposit date:2014-03-13
Release date:2014-05-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Arabidopsis thaliana TOP2 oligopeptidase.
Acta Crystallogr F Struct Biol Commun, 70, 2014
3G5B
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BU of 3g5b by Molmil
The structure of UNC5b cytoplasmic domain
Descriptor: Netrin receptor UNC5B, PHOSPHATE ION
Authors:Wang, R, Wei, Z, Zhang, M.
Deposit date:2009-02-04
Release date:2009-04-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Autoinhibition of UNC5b revealed by the cytoplasmic domain structure of the receptor
Mol.Cell, 33, 2009
2LRW
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BU of 2lrw by Molmil
Solution structure of a ubiquitin-like protein from Trypanosoma brucei
Descriptor: Ubiquitin, putative
Authors:Wang, R, Wang, T, Liao, S, Zhang, J, Tu, X.
Deposit date:2012-04-13
Release date:2013-04-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of a ubiqutin-like protein from Trypanosoma bucei
To be Published
3E6F
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BU of 3e6f by Molmil
MHC CLASS I H-2Dd Heavy chain complexed with Beta-2 Microglobulin and a variant peptide, PA9, from the Human immunodeficiency virus (BaL) envelope glycoprotein 120
Descriptor: BETA-2 MICROGLOBULIN, Envelope glycoprotein 9-residue peptide, H-2 class I histocompatibility antigen, ...
Authors:Wang, R, Natarajan, K, Robinson, H, Margulies, D.H.
Deposit date:2008-08-15
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Different vaccine vectors delivering the same antigen elicit CD8+ T cell responses with distinct clonotype and epitope specificity
J.Immunol., 183, 2009
3QJJ
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BU of 3qjj by Molmil
One RAMP protein binding different RNA substrates
Descriptor: Putative uncharacterized protein PH0350, RNA (5'-R(*GP*UP*UP*GP*AP*AP*AP*UP*CP*AP*GP*A)-3')
Authors:Wang, R, Zheng, H, Preamplume, G, Li, H.
Deposit date:2011-01-29
Release date:2012-02-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8049 Å)
Cite:Cooperative and Specific Binding of a RAMP Protein to Single-stranded CRISPR Repeat RNA
To be Published
3QJP
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BU of 3qjp by Molmil
An RAMP protein binding different RNA substrates
Descriptor: Putative uncharacterized protein PH0350, RNA (5'-R(P*UP*AP*GP*UP*UP*UP*AP*A)-3')
Authors:Wang, R, Zheng, H, Preamplume, G, Li, H.
Deposit date:2011-01-30
Release date:2012-02-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2986 Å)
Cite:Cooperative and Specific Binding of a RAMP Protein to Single-stranded CRISPR Repeat RNA
To be Published
3DMM
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BU of 3dmm by Molmil
Crystal structure of the CD8 alpha beta/H-2Dd complex
Descriptor: Beta-2 microglobulin, H-2 class I histocompatibility antigen, D-D alpha chain, ...
Authors:Wang, R, Natarajan, K, Margulies, D.H.
Deposit date:2008-07-01
Release date:2009-07-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of the CD8alphabeta/MHC class i interaction: focused recognition orients CD8beta to a T cell proximal position.
J.Immunol., 183, 2009
3QJL
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BU of 3qjl by Molmil
One RAMP protein binding different RNA substrates
Descriptor: Putative uncharacterized protein PH0350, RNA (5'-R(*GP*UP*UP*AP*CP*AP*AP*UP*AP*AP*GP*A)-3')
Authors:Wang, R, Zheng, H, Preamplume, G, Li, H.
Deposit date:2011-01-30
Release date:2012-02-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7009 Å)
Cite:Cooperative and Specific Binding of a RAMP Protein to Single-stranded CRISPR Repeat RNA
To be Published
8B3K
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BU of 8b3k by Molmil
Crystal structure of human Plexin-B1 (20-535) in the unbound state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, Plexin-B1
Authors:Cowan, R, Hall, G, Carr, M.
Deposit date:2022-09-16
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.685 Å)
Cite:Nanobody inhibitors of Plexin-B1 identify allostery in plexin-semaphorin interactions and signaling.
J.Biol.Chem., 299, 2023
3PKM
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BU of 3pkm by Molmil
Crystal structure of Cas6 with its substrate RNA
Descriptor: 5'-R(*AP*UP*UP*AP*CP*AP*AP*UP*AP*A)-3', 5'-R(P*UP*UP*AP*CP*AP*AP*UP*AP*A)-3', CRISPR-associated endoribonuclease Cas6
Authors:Wang, R, Preamplume, G, Li, H.
Deposit date:2010-11-11
Release date:2011-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.103 Å)
Cite:Interaction of the Cas6 Riboendonuclease with CRISPR RNAs: Recognition and Cleavage.
Structure, 19, 2011
3E6H
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BU of 3e6h by Molmil
MHC CLASS I H-2Dd heavy chain complexed with Beta-2 Microglobulin and a variant peptide, PI10, from the human immunodeficiency virus (BaL) envelope glycoprotein 120
Descriptor: Envelope glycoprotein 10-residue peptide, H-2 class I histocompatibility antigen, D-D alpha chain, ...
Authors:Wang, R, Natarajan, K, Robinson, H, Margulies, D.H.
Deposit date:2008-08-15
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Different vaccine vectors delivering the same antigen elicit CD8+ T cell responses with distinct clonotype and epitope specificity
J.Immunol., 183, 2009
3GS2
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BU of 3gs2 by Molmil
Ring1B C-terminal domain/Cbx7 Cbox Complex
Descriptor: Chromobox protein homolog 7, E3 ubiquitin-protein ligase RING2, SULFATE ION, ...
Authors:Wang, R, Taylor, A.B, Kim, C.A.
Deposit date:2009-03-26
Release date:2010-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Polycomb Group Targeting through Different Binding Partners of RING1B C-Terminal Domain.
Structure, 18, 2010
2M1H
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BU of 2m1h by Molmil
Solution structure of a PWWP domain from Trypanosoma brucei
Descriptor: Transcription elongation factor S-II
Authors:Wang, R, Fan, K, Liao, S, Zhang, J, Tu, X.
Deposit date:2012-11-28
Release date:2013-12-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of TbTFIIS2-1 PWWP domain from Trypanosoma brucei.
Proteins, 84, 2016

222415

數據於2024-07-10公開中

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