Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12895 件

4ECX
DownloadVisualize
BU of 4ecx by Molmil
Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 300 sec
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
著者Nakamura, T, Zhao, Y, Yang, W.
登録日2012-03-26
公開日2012-07-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.744 Å)
主引用文献Watching DNA polymerase eta make a phosphodiester bond
Nature, 487, 2012
4K48
DownloadVisualize
BU of 4k48 by Molmil
Structure of the Streptococcus pneumoniae leucyl-tRNA synthetase editing domain
分子名称: Leucine--tRNA ligase
著者Hu, Q.H, Liu, R.J, Fang, Z.P, Zhang, J, Ding, Y.Y, Tan, M, Wang, M, Pan, W, Zhou, H.C, Wang, E.D.
登録日2013-04-12
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Discovery of a potent benzoxaborole-based anti-pneumococcal agent targeting leucyl-tRNA synthetase
Sci Rep, 3, 2013
4KQZ
DownloadVisualize
BU of 4kqz by Molmil
structure of the receptor binding domain (RBD) of MERS-CoV spike
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, S protein
著者Lu, G, Hu, Y, Wang, Q, Qi, J, Gao, F, Li, Y, Zhang, Y, Zhang, W, Yuan, Y, Bao, J, Zhang, B, Shi, Y, Yan, J, Gao, G.F.
登録日2013-05-15
公開日2013-07-10
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.514 Å)
主引用文献Molecular basis of binding between novel human coronavirus MERS-CoV and its receptor CD26.
Nature, 500, 2013
4K6N
DownloadVisualize
BU of 4k6n by Molmil
Crystal structure of yeast 4-amino-4-deoxychorismate lyase
分子名称: Aminodeoxychorismate lyase, PYRIDOXAL-5'-PHOSPHATE
著者Dai, Y.-N, Chi, C.-B, Zhou, K, Cheng, W, Jiang, Y.-L, Ren, Y.-M, Chen, Y, Zhou, C.-Z.
登録日2013-04-16
公開日2013-07-10
最終更新日2013-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and catalytic mechanism of yeast 4-amino-4-deoxychorismate lyase
J.Biol.Chem., 288, 2013
4IJE
DownloadVisualize
BU of 4ije by Molmil
Crystal structure of the Zaire ebolavirus VP35 interferon inhibitory domain R312A/K319A/R322A mutant
分子名称: PHOSPHATE ION, POTASSIUM ION, Polymerase cofactor VP35, ...
著者Binning, J.B, Wang, T, Leung, D.W, Xu, W, Borek, D, Amarasinghe, G.K.
登録日2012-12-21
公開日2013-10-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Development of RNA Aptamers Targeting Ebola Virus VP35.
Biochemistry, 52, 2013
3TMA
DownloadVisualize
BU of 3tma by Molmil
Crystal structure of TrmN from Thermus thermophilus
分子名称: PHOSPHATE ION, methyltransferase
著者Fislage, M, Roovers, M, Tuszynska, I, Bujnicki, J.M, Droogmans, L, Versees, W.
登録日2011-08-31
公開日2012-03-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of the tRNA:m2G6 methyltransferase Trm14/TrmN from two domains of life.
Nucleic Acids Res., 40, 2012
4NFF
DownloadVisualize
BU of 4nff by Molmil
Human kallikrein-related peptidase 2 in complex with PPACK
分子名称: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Kallikrein-2
著者Skala, W, Brandstetter, H, Magdolen, V, Goettig, P.
登録日2013-10-31
公開日2014-10-29
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-function analyses of human kallikrein-related peptidase 2 establish the 99-loop as master regulator of activity
J.Biol.Chem., 289, 2014
3TUH
DownloadVisualize
BU of 3tuh by Molmil
Crystal Structure of the N-terminal domain of an HSP90 in the presence of an the inhibitor ganetespib
分子名称: 5-[2,4-dihydroxy-5-(propan-2-yl)phenyl]-4-(1-methyl-1H-indol-5-yl)-2,4-dihydro-3H-1,2,4-triazol-3-one, Heat shock protein HSP 90-alpha
著者Ying, W.
登録日2011-09-16
公開日2012-09-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of the N-terminal domain of an HSP90 in the presence of an the inhibitor ganetespib
TO BE PUBLISHED
7FHC
DownloadVisualize
BU of 7fhc by Molmil
Structure of prenyltransferase mutant V49W from Streptomyces sp. (strain CL190)
分子名称: Prenyltransferase
著者Xue, B, Lim, K.J.H, Hartono, Y.D, Go, M.D.K, Fan, H, Yew, W.S.
登録日2021-07-29
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structure-Guided Engineering of Prenyltransferase NphB for High-Yield and Regioselective Cannabinoid Production.
Acs Catalysis, 12, 2022
7FHB
DownloadVisualize
BU of 7fhb by Molmil
Structure of prenyltransferase from Streptomyces sp. (strain CL190) with bound GPP
分子名称: GERANYL DIPHOSPHATE, Prenyltransferase
著者Xue, B, Lim, K.J.H, Hartono, Y.D, Go, M.D.K, Fan, H, Yew, W.S.
登録日2021-07-29
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-Guided Engineering of Prenyltransferase NphB for High-Yield and Regioselective Cannabinoid Production.
Acs Catalysis, 12, 2022
4NF2
DownloadVisualize
BU of 4nf2 by Molmil
Crystal structure of anabolic ornithine carbamoyltransferase from Bacillus anthracis in complex with carbamoyl phosphate and L-norvaline
分子名称: CHLORIDE ION, NORVALINE, Ornithine carbamoyltransferase, ...
著者Shabalin, I.G, Handing, K, Cymborowski, M.T, Stam, J, Winsor, J, Shuvalova, L, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-10-30
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structures and kinetic properties of anabolic ornithine carbamoyltransferase from human pathogens Vibrio vulnificus and Bacillus anthracis
To be Published
7FHD
DownloadVisualize
BU of 7fhd by Molmil
Structure of prenyltransferase mutant Y288P from Streptomyces sp. (strain CL190)
分子名称: Prenyltransferase
著者Xue, B, Lim, K.J.H, Hartono, Y.D, Go, M.D.K, Fan, H, Yew, W.S.
登録日2021-07-29
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure-Guided Engineering of Prenyltransferase NphB for High-Yield and Regioselective Cannabinoid Production.
Acs Catalysis, 12, 2022
4IJD
DownloadVisualize
BU of 4ijd by Molmil
Crystal structure of methyltransferase domain of human PR domain-containing protein 9
分子名称: Histone-lysine N-methyltransferase PRDM9, UNKNOWN ATOM OR ION, ZINC ION
著者Dong, A, Dombrovski, L, Li, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
登録日2012-12-21
公開日2013-02-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of methyltransferase domain of human PR domain-containing protein 9
To be Published
3TZK
DownloadVisualize
BU of 3tzk by Molmil
Crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (FabG)(G92A) from Vibrio cholerae
分子名称: 3-oxoacyl-[acyl-carrier protein] reductase, SULFATE ION, UNKNOWN ATOM OR ION
著者Hou, J, Chruszcz, M, Zheng, H, Grabowski, M, Domagalski, M, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-09-27
公開日2011-10-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Dissecting the Structural Elements for the Activation of beta-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae.
J.Bacteriol., 198, 2015
3TUG
DownloadVisualize
BU of 3tug by Molmil
Crystal structure of the HECT domain of ITCH E3 ubiquitin ligase
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase Itchy homolog, UNKNOWN ATOM OR ION
著者Dong, A, Dobrovetsky, E, Xue, S, Butler, C, Wernimont, A, Walker, J.R, Tempel, W, Dhe-Paganon, S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Tong, Y, Structural Genomics Consortium (SGC)
登録日2011-09-16
公開日2011-10-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structure of the HECT domain of ITCH E3 ubiquitin ligase
To be Published
4NFT
DownloadVisualize
BU of 4nft by Molmil
Crystal structure of human lnkH2B-h2A.Z-Anp32e
分子名称: Acidic leucine-rich nuclear phosphoprotein 32 family member E, Histone H2B type 2-E, Histone H2A.Z
著者Shan, S, Pan, L, Mao, Z, Wang, W, Sun, J, Dong, Q, Liang, X, Ding, X, Chen, S, Dai, L, Zhang, Z, Zhu, B, Zhou, Z.
登録日2013-11-01
公開日2014-04-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Anp32e, a higher eukaryotic histone chaperone directs preferential recognition for H2A.Z
Cell Res., 24, 2014
7FHE
DownloadVisualize
BU of 7fhe by Molmil
Structure of prenyltransferase mutant Q295F from Streptomyces sp. (strain CL190)
分子名称: Prenyltransferase
著者Xue, B, Lim, K.J.H, Hartono, Y.D, Go, M.D.K, Fan, H, Yew, W.S.
登録日2021-07-29
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-Guided Engineering of Prenyltransferase NphB for High-Yield and Regioselective Cannabinoid Production.
Acs Catalysis, 12, 2022
5U5A
DownloadVisualize
BU of 5u5a by Molmil
Coiled Coil Peptide Metal Coordination Framework: Dimer Fold
分子名称: COPPER (II) ION, Designed dimeric coiled coil peptide with two terpyridine side chains
著者Tavenor, N.A, Murnin, M.J, Horne, W.S.
登録日2016-12-06
公開日2017-02-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.23 Å)
主引用文献Supramolecular Metal-Coordination Polymers, Nets, and Frameworks from Synthetic Coiled-Coil Peptides.
J. Am. Chem. Soc., 139, 2017
7F0D
DownloadVisualize
BU of 7f0d by Molmil
Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Zhang, W, Sun, Y, Gao, N, Li, Z.
登録日2021-06-03
公開日2022-06-29
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of Mycobacterium tuberculosis 50S ribosomal subunit bound with clarithromycin reveals dynamic and specific interactions with macrolides.
Emerg Microbes Infect, 11, 2022
7FHF
DownloadVisualize
BU of 7fhf by Molmil
Structure of prenyltransferase mutant V49W/Y288F/Q295F from Streptomyces sp. (strain CL190)
分子名称: Prenyltransferase
著者Xue, B, Lim, K.J.H, Hartono, Y.D, Go, M.D.K, Fan, H, Yew, W.S.
登録日2021-07-29
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-Guided Engineering of Prenyltransferase NphB for High-Yield and Regioselective Cannabinoid Production.
Acs Catalysis, 12, 2022
4JRM
DownloadVisualize
BU of 4jrm by Molmil
Crystal structure of beta-ketoacyl-ACP synthase II (FabF) from Vibrio Cholerae (space group P212121) at 1.75 Angstrom
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 2, ACETATE ION, GLYCEROL
著者Hou, J, Chruszcz, M, Shabalin, I.G, Zheng, H, Cooper, D.R, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-03-21
公開日2013-04-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of beta-ketoacyl-ACP synthase II (FabF) from Vibrio cholerae (space group P43) at 2.2 Angstrom
To be Published
1Q6O
DownloadVisualize
BU of 1q6o by Molmil
Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-gulonaet 6-phosphate
分子名称: 3-keto-L-gulonate 6-phosphate decarboxylase, L-GULURONIC ACID 6-PHOSPHATE, MAGNESIUM ION
著者Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
登録日2003-08-13
公開日2003-10-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.202 Å)
主引用文献Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
4B7E
DownloadVisualize
BU of 4b7e by Molmil
FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH CONSENSUS ANKYRIN REPEAT DOMAIN-LEU PEPTIDE (20-MER)
分子名称: CONSENSUS ANKYRIN REPEAT DOMAIN-LEU, GLYCEROL, HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR, ...
著者Chowdhury, R, Ge, W, Schofield, C.J.
登録日2012-08-17
公開日2013-01-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Substrate selectivity analyses of factor inhibiting hypoxia-inducible factor.
Angew. Chem. Int. Ed. Engl., 52, 2013
3SZP
DownloadVisualize
BU of 3szp by Molmil
Full-length structure of the Vibrio cholerae virulence activator, AphB, a member of the LTTR protein family
分子名称: Transcriptional regulator, LysR family
著者Taylor, J.L, De Silva, R.S, Kovacikova, G, Lin, W, Taylor, R.K, Skorupski, K, Kull, F.J.
登録日2011-07-19
公開日2011-11-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献The crystal structure of AphB, a virulence gene activator from Vibrio cholerae, reveals residues that influence its response to oxygen and pH.
Mol.Microbiol., 83, 2012
1Q6R
DownloadVisualize
BU of 1q6r by Molmil
Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-xylulose 5-phosphate
分子名称: 3-keto-L-gulonate 6-phosphate decarboxylase, L-XYLULOSE 5-PHOSPHATE, MAGNESIUM ION
著者Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
登録日2003-08-13
公開日2003-10-28
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon