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PDB: 12895 件

5XK6
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BU of 5xk6 by Molmil
Structure of a prenyltransferase soaked with IPP
分子名称: MAGNESIUM ION, PYROPHOSPHATE 2-, SULFATE ION, ...
著者Ko, T.P, Guo, R.T, Liu, W, Chen, C.C, Gao, J.
登録日2017-05-05
公開日2018-01-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献"Head-to-Middle" and "Head-to-Tail" cis-Prenyl Transferases: Structure of Isosesquilavandulyl Diphosphate Synthase.
Angew. Chem. Int. Ed. Engl., 57, 2018
5XKI
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BU of 5xki by Molmil
Crystal structure of baculoviral sulfhydryl oxidase AcP33 (wide type)
分子名称: FAD-linked sulfhydryl oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者Kuang, W, Hu, Z, Gong, P.
登録日2017-05-07
公開日2017-09-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Three Conserved Regions in Baculovirus Sulfhydryl Oxidase P33 Are Critical for Enzymatic Activity and Function
J. Virol., 91, 2017
5XLR
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BU of 5xlr by Molmil
Structure of SARS-CoV spike glycoprotein
分子名称: Spike glycoprotein
著者Gui, M, Song, W, Xiang, Y, Wang, X.
登録日2017-05-11
公開日2017-06-07
最終更新日2019-10-09
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-electron microscopy structures of the SARS-CoV spike glycoprotein reveal a prerequisite conformational state for receptor binding.
Cell Res., 27, 2017
7C2K
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BU of 7c2k by Molmil
COVID-19 RNA-dependent RNA polymerase pre-translocated catalytic complex
分子名称: Non-structural protein 7, Non-structural protein 8, RNA (29-MER), ...
著者Wang, Q, Gao, Y, Ji, W, Mu, A, Rao, Z.
登録日2020-05-07
公開日2020-06-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Structural Basis for RNA Replication by the SARS-CoV-2 Polymerase.
Cell, 182, 2020
5XGQ
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BU of 5xgq by Molmil
Crystal structure of apo form (free-state) Mycobacterium tuberculosis methionyl-tRNA synthetase
分子名称: Methionine-tRNA ligase
著者Wang, W, Wang, M, Wojdyla, J.A, Cui, S.
登録日2017-04-15
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Structural characterization of free-state and product-stateMycobacterium tuberculosismethionyl-tRNA synthetase reveals an induced-fit ligand-recognition mechanism
IUCrJ, 5, 2018
5XK3
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BU of 5xk3 by Molmil
Crystal structure of apo form Isosesquilavandulyl Diphosphate Synthase from Streptomyces sp. strain CNH-189
分子名称: SULFATE ION, Undecaprenyl diphosphate synthase
著者Ko, T.P, Guo, R.T, Liu, W, Chen, C.C, Gao, J.
登録日2017-05-05
公開日2018-01-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献"Head-to-Middle" and "Head-to-Tail" cis-Prenyl Transferases: Structure of Isosesquilavandulyl Diphosphate Synthase.
Angew. Chem. Int. Ed. Engl., 57, 2018
7C8V
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BU of 7c8v by Molmil
Structure of sybody SR4 in complex with the SARS-CoV-2 S Receptor Binding domain (RBD)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Spike protein S1, ...
著者Li, T, Yao, H, Cai, H, Qin, W, Li, D.
登録日2020-06-03
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A synthetic nanobody targeting RBD protects hamsters from SARS-CoV-2 infection.
Nat Commun, 12, 2021
5XPR
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BU of 5xpr by Molmil
Human endothelin receptor type-B in complex with antagonist bosentan
分子名称: 4-tert-butyl-N-[6-(2-hydroxyethyloxy)-5-(2-methoxyphenoxy)-2-pyrimidin-2-yl-pyrimidin-4-yl]benzenesulfonamide, Endothelin B receptor,Endolysin,Endothelin B receptor, SULFATE ION
著者Shihoya, W, Nishizawa, T, Yamashita, K, Hirata, K, Okuta, A, Tani, K, Fujiyoshi, Y, Doi, T, Nureki, O.
登録日2017-06-04
公開日2017-08-16
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献X-ray structures of endothelin ETB receptor bound to clinical antagonist bosentan and its analog
Nat. Struct. Mol. Biol., 24, 2017
7C8W
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BU of 7c8w by Molmil
Structure of sybody MR17 in complex with the SARS-CoV-2 S receptor-binding domain (RBD)
分子名称: GLYCEROL, Spike protein S1, Synthetic nanobody MR17, ...
著者Li, T, Cai, H, Yao, H, Qin, W, Li, D.
登録日2020-06-03
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献A synthetic nanobody targeting RBD protects hamsters from SARS-CoV-2 infection.
Nat Commun, 12, 2021
6I9U
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BU of 6i9u by Molmil
Crystal structure of the halohydrin dehalogenase HheG T123W mutant
分子名称: Putative oxidoreductase
著者Kluenemann, T, Blankenfeldt, W, Schallmey, A.
登録日2018-11-26
公開日2019-08-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Position 123 of halohydrin dehalogenase HheG plays an important role in stability, activity, and enantioselectivity.
Sci Rep, 9, 2019
5X4O
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BU of 5x4o by Molmil
Crystal structure of the BCL6 BTB domain in complex with Compound 5
分子名称: B-cell lymphoma 6 protein, N-methyl-N-{3-[({2-[(2-oxo-2,3-dihydro-1H-indol-5-yl)amino]-5-(trifluoromethyl)pyrimidin-4-yl}amino)methyl]pyridin-2-yl}methanesulfonamide
著者Sogabe, S, Ida, K, Lane, W, Snell, G.
登録日2017-02-13
公開日2017-05-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Discovery of a B-Cell Lymphoma 6 Protein-Protein Interaction Inhibitor by a Biophysics-Driven Fragment-Based Approach
J. Med. Chem., 60, 2017
5X62
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BU of 5x62 by Molmil
Crystal structure of a carnosine N-methyltransferase bound by AdoHcy
分子名称: Carnosine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION
著者Xie, W, Liu, X.
登録日2017-02-20
公開日2017-07-26
最終更新日2017-08-30
実験手法X-RAY DIFFRACTION (2.204 Å)
主引用文献Substrate Recognition Mechanism of the Putative Yeast Carnosine N-methyltransferase
ACS Chem. Biol., 12, 2017
6I64
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BU of 6i64 by Molmil
Crystal structure of human ERRg LBD in complex with bisphenol-E
分子名称: 4-[1-(4-hydroxyphenyl)ethyl]phenol, Estrogen-related receptor gamma, GLYCEROL
著者Delfosse, V, Blanc, P, Bourguet, W.
登録日2018-11-15
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Insights into the activation mechanism of human estrogen-related receptor gamma by environmental endocrine disruptors.
Cell.Mol.Life Sci., 76, 2019
5XS8
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BU of 5xs8 by Molmil
Crystal structure of solute-binding protein complexed with unsaturated chondroitin disaccharide with two sulfate groups at C-4 and C-6 positions of GalNAc
分子名称: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4,6-di-O-sulfo-beta-D-galactopyranose, CALCIUM ION, Extracellular solute-binding protein family 1
著者Oiki, S, Kamochi, R, Mikami, B, Murata, K, Hashimoto, W.
登録日2017-06-12
公開日2018-01-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.952 Å)
主引用文献Alternative substrate-bound conformation of bacterial solute-binding protein involved in the import of mammalian host glycosaminoglycans.
Sci Rep, 7, 2017
5XB0
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BU of 5xb0 by Molmil
1.6 A crystal structure of peptidyl-prolyl cis-trans isomerase PPIase from Pseudomonas syringae pv. tomato str. DC3000 (PSPTO DC3000)
分子名称: L(+)-TARTARIC ACID, Peptidyl-prolyl cis-trans isomerase
著者Zhang, H, Gao, Y, Li, M, Chang, W.
登録日2017-03-15
公開日2017-04-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献1.6 A crystal structure of peptidyl-prolyl cis-trans isomerase PPIase from Pseudomonas syringae pv. tomato str. DC3000 (PSPTO DC3000)
To Be Published
5XTO
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BU of 5xto by Molmil
Crystal structure of baculoviral sulfhydryl oxidase P33 (H114A mutant)
分子名称: FAD-linked sulfhydryl oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者Kuang, W, Hu, Z, Gong, P.
登録日2017-06-20
公開日2017-09-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Three Conserved Regions in Baculovirus Sulfhydryl Oxidase P33 Are Critical for Enzymatic Activity and Function
J. Virol., 91, 2017
6IJP
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BU of 6ijp by Molmil
The structure of the ADAL-IMP complex
分子名称: Adenosine/AMP deaminase family protein, INOSINIC ACID, ZINC ION
著者Xie, W, Jia, Q.
登録日2018-10-11
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Alternative conformation induced by substrate binding for Arabidopsis thalianaN6-methyl-AMP deaminase.
Nucleic Acids Res., 47, 2019
7CBO
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BU of 7cbo by Molmil
Crystal structure of beta-N-acetylhexosaminidase Am0868 from Akkermansia muciniphila in complex with GlcNAc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-N-acetylhexosaminidase, GLYCEROL, ...
著者Xu, W, Wang, M, Zhang, M.
登録日2020-06-13
公開日2020-08-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and biochemical analyses of beta-N-acetylhexosaminidase Am0868 from Akkermansia muciniphila involved in mucin degradation.
Biochem.Biophys.Res.Commun., 529, 2020
6IGK
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BU of 6igk by Molmil
Crystal Structure of human ETB receptor in complex with Endothelin-3
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CITRIC ACID, Endothelin receptor type B,Endolysin,Endothelin receptor type B, ...
著者Shihoya, W, Izume, T, Inoue, A, Yamashita, K, Kadji, F.M.N, Hirata, K, Aoki, J, Nishizawa, T, Nureki, O.
登録日2018-09-25
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of human ETBreceptor provide mechanistic insight into receptor activation and partial activation.
Nat Commun, 9, 2018
5XRZ
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BU of 5xrz by Molmil
Structure of a ssDNA bound to the inner DNA binding site of RAD52
分子名称: DNA repair protein RAD52 homolog, POTASSIUM ION, ssDNA (40-MER)
著者Saotome, M, Saito, K, Yasuda, T, Sugiyama, S, Kurumizaka, H, Kagawa, W.
登録日2017-06-11
公開日2018-04-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural Basis of Homology-Directed DNA Repair Mediated by RAD52
iScience, 3, 2018
5X89
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BU of 5x89 by Molmil
The X-ray crystal structure of subunit fusion RNA splicing endonuclease from Methanopyrus kandleri
分子名称: EndA-like protein,tRNA-splicing endonuclease, PHOSPHATE ION
著者Kaneta, A, Fujishima, K, Morikazu, W, Hori, H, Hirata, A.
登録日2017-03-01
公開日2018-01-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献The RNA-splicing endonuclease from the euryarchaeaon Methanopyrus kandleri is a heterotetramer with constrained substrate specificity
Nucleic Acids Res., 46, 2018
6IIK
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BU of 6iik by Molmil
USP14 catalytic domain with IU1
分子名称: 1-[1-(4-fluorophenyl)-2,5-dimethyl-1H-pyrrol-3-yl]-2-(pyrrolidin-1-yl)ethan-1-one, Ubiquitin carboxyl-terminal hydrolase 14
著者Mei, Z.Q, Wang, Y.W, He, W, Wang, F.
登録日2018-10-06
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.
Cell Res., 28, 2018
5X8Y
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BU of 5x8y by Molmil
A Mutation identified in Neonatal Microcephaly Destabilizes Zika Virus NS1 Assembly in vitro
分子名称: ZIKV NS1
著者Wang, D, Chen, C, Liu, S, Zhou, H, Yang, K, Zhao, Q, Ji, X, Chen, C, Xie, W, Wang, Z, Mi, L.Z, Yang, H.
登録日2017-03-03
公開日2017-05-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.817 Å)
主引用文献A Mutation Identified in Neonatal Microcephaly Destabilizes Zika Virus NS1 Assembly in Vitro
Sci Rep, 7, 2017
6IIR
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BU of 6iir by Molmil
Complex structure of the HRP3 PWWP domain with a 10-bp GC-rich DNA
分子名称: 10-bp GC-rich DNA, Hepatoma-derived growth factor-related protein 3
著者Wang, Z, Tian, W.
登録日2018-10-07
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Complex structure of the HRP3 PWWP domain with a 10-bp GC-rich DNA
Nucleic Acids Res., 2019
7CBN
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BU of 7cbn by Molmil
Crystal structure of beta-N-acetylhexosaminidase Am0868 from Akkermansia muciniphila
分子名称: Beta-N-acetylhexosaminidase, GLYCEROL, MALONIC ACID
著者Xu, W, Wang, M, Zhang, M.
登録日2020-06-13
公開日2020-08-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and biochemical analyses of beta-N-acetylhexosaminidase Am0868 from Akkermansia muciniphila involved in mucin degradation.
Biochem.Biophys.Res.Commun., 529, 2020

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件を2024-07-10に公開中

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