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PDB: 12920 件

8F3G
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Crystal structure of Penicillin Binding Protein 5 (PBP5) T485M variant in the penicillin bound form from Enterococcus faecium
分子名称: OPEN FORM - PENICILLIN G, Penicillin binding protein 5, SULFATE ION
著者D'Andrea, E.D, Choy, M.S, Schoenle, M.V, Page, R, Peti, W.
登録日2022-11-10
公開日2023-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.59 Å)
主引用文献The Molecular Basis for Resistance of E. faecium PBP5 to beta-lactam Antibiotics
Nat Commun, 2023
8F3Q
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Crystal structure of Penicillin Binding Protein 5 (PBP5) Y460A variant apo form from Enterococcus faecium
分子名称: Penicillin binding protein 5, SULFATE ION
著者D'Andrea, E.D, Schoenle, M.V, Choy, M.S, Page, R, Peti, W.
登録日2022-11-10
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Molecular Basis for Resistance of E. faecium PBP5 to beta-lactam Antibiotics
Nat Commun, 2023
6N9U
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BU of 6n9u by Molmil
Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) interacting with primase domains of two gp4 subunits bound to an RNA/DNA hybrid and dTTP (from LagS1)
分子名称: DNA (44-MER), DNA primase/helicase, DNA-directed DNA polymerase, ...
著者Gao, Y, Fox, T, Val, N, Yang, W.
登録日2018-12-04
公開日2019-03-06
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structures and operating principles of the replisome.
Science, 363, 2019
6MH8
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High-viscosity injector-based Pink Beam Serial Crystallography of Micro-crystals at a Synchrotron Radiation Source
分子名称: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a, Soluble cytochrome b562 chimeric construct
著者Martin-Garcia, J.M, Zhu, L, Mendez, D, Lee, M, Chun, E, Li, C, Hu, H, Subramanian, G, Kissick, D, Ogata, C, Henning, R, Ishchenko, A, Dobson, Z, Zhan, S, Weierstall, U, Spence, J.C.H, Fromme, P, Zatsepin, N.A, Fischetti, R.F, Cherezov, V, Liu, W.
登録日2018-09-17
公開日2019-04-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献High-viscosity injector-based pink-beam serial crystallography of microcrystals at a synchrotron radiation source.
Iucrj, 6, 2019
5KFG
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Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 30s
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Gao, Y, Yang, W.
登録日2016-06-12
公開日2016-06-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science, 352, 2016
5KFR
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BU of 5kfr by Molmil
Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 20 mM Mn2+ for 600s
分子名称: 2'-DEOXYADENOSINE 5'-O-(1-THIOTRIPHOSPHATE), DIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*(AS))-3'), ...
著者Gao, Y, Yang, W.
登録日2016-06-12
公開日2016-06-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science, 352, 2016
5KG4
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BU of 5kg4 by Molmil
Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Mg2+ for 60s
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*A)-3'), ...
著者Gao, Y, Yang, W.
登録日2016-06-12
公開日2016-06-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science, 352, 2016
6MKI
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Crystal structure of penicillin-binding protein 4 (PBP4) from Enterococcus faecalis in the ceftaroline-bound form
分子名称: Ceftaroline, bound form, GLYCEROL, ...
著者D'Andrea, E.D, Moon, T.M, Peti, W, Page, R.
登録日2018-09-25
公開日2018-10-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.984 Å)
主引用文献The structures of penicillin-binding protein 4 (PBP4) and PBP5 fromEnterococciprovide structural insights into beta-lactam resistance.
J. Biol. Chem., 293, 2018
8K5A
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BU of 8k5a by Molmil
The cryo-EM map of open TIEA-TIC complex
分子名称: 15 kDa RNA polymerase-binding protein, DNA (29-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Zhang, K.N, Liu, Y, Chen, M, Wang, Y, Lin, W, Li, M, Zhang, X, Gao, Y, Gong, Q, Chen, H, Steve, M, Li, S, Zhang, K, Liu, B.
登録日2023-07-21
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献TIEA inhibits sigma70-dependent transcriptions, accelerates elongation speed and elevates transcription error
To Be Published
8K0X
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ABCG25 Wild Type purified with DDM in the ABA-bound state
分子名称: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, ABC transporter G family member 25
著者Sun, L, Liu, X, Ying, W, Liao, L, Wei, H.
登録日2023-07-10
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献ABCG25 Wild Type purified with DDM in the ABA-bound state
To Be Published
8K0Z
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ABCG25 Wild Type purified with DDM in the apo-state
分子名称: ABC transporter G family member 25
著者Sun, L, Liu, X, Ying, W, Liao, L, Wei, H.
登録日2023-07-10
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献ABCG25 Wild Type purified with DDM in the apo-state
To Be Published
8HI8
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BU of 8hi8 by Molmil
Crystal structure of a holoenzyme TglHI with three Fe ions for Pseudomonas syringae Peptidyl (S) 2-mercaptoglycine biosynthesis
分子名称: DUF692 family protein, FE (III) ION, RiPP Recognition Protein
著者Cheng, W, Zheng, Y.H, Fu, X.L.
登録日2022-11-18
公開日2023-08-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structures of the holoenzyme TglHI required for 3-thiaglutamate biosynthesis.
Structure, 31, 2023
6MTG
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BU of 6mtg by Molmil
A Single Reactive Noncanonical Amino Acid is Able to Dramatically Stabilize Protein Structure
分子名称: DI(HYDROXYETHYL)ETHER, FORMIC ACID, GLYCEROL, ...
著者Li, J.C, Nasertorabi, F, Xuan, W, Han, G.W, Stevens, R.C, Schultz, P.G.
登録日2018-10-19
公開日2019-06-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A Single Reactive Noncanonical Amino Acid Is Able to Dramatically Stabilize Protein Structure.
Acs Chem.Biol., 14, 2019
8HCI
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BU of 8hci by Molmil
Crystal structure of a holoenzyme Fe-free TglHI for Pseudomonas syringae Peptidyl (S) 2-mercaptoglycine biosynthesis
分子名称: DUF692 family protein, RiPP Recognition protein
著者Cheng, W, Zheng, Y.H, Fu, X.L.
登録日2022-11-01
公開日2023-08-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.399 Å)
主引用文献Structures of the holoenzyme TglHI required for 3-thiaglutamate biosynthesis.
Structure, 31, 2023
8HI7
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BU of 8hi7 by Molmil
Crystal structure of a holoenzyme TglHI with two Fe irons for Pseudomonas syringae Peptidyl (S) 2-mercaptoglycine biosynthesis
分子名称: DUF692 family protein, FE (III) ION, RiPP Recognition protein
著者Cheng, W, Zheng, Y.H, Fu, X.L.
登録日2022-11-18
公開日2023-08-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structures of the holoenzyme TglHI required for 3-thiaglutamate biosynthesis.
Structure, 31, 2023
5CB5
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BU of 5cb5 by Molmil
Structural Insights into the Mechanism of Escherichia coli Ymdb
分子名称: ACETATE ION, ADENOSINE-5-DIPHOSPHORIBOSE, O-acetyl-ADP-ribose deacetylase, ...
著者Zhang, W, Wang, C, Song, Y, Shao, C, Zhang, X, Zang, J.
登録日2015-06-30
公開日2015-11-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the mechanism of Escherichia coli YmdB: A 2'-O-acetyl-ADP-ribose deacetylase
J.Struct.Biol., 192, 2015
5K4I
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BU of 5k4i by Molmil
Crystal Structure of ERK2 in complex with compound 22
分子名称: 1,2-ETHANEDIOL, 1-[(1~{S})-1-(4-chloranyl-3-fluoranyl-phenyl)-2-oxidanyl-ethyl]-4-[2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]pyridin-2-one, Mitogen-activated protein kinase 1
著者Yin, J, Wang, W.
登録日2016-05-20
公開日2016-07-06
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Discovery of (S)-1-(1-(4-Chloro-3-fluorophenyl)-2-hydroxyethyl)-4-(2-((1-methyl-1H-pyrazol-5-yl)amino)pyrimidin-4-yl)pyridin-2(1H)-one (GDC-0994), an Extracellular Signal-Regulated Kinase 1/2 (ERK1/2) Inhibitor in Early Clinical Development.
J.Med.Chem., 59, 2016
5K6S
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BU of 5k6s by Molmil
The structure of the PP2A B56 subunit BubR1 complex
分子名称: BubR1, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform
著者Page, R, Wang, X, Bajaj, R, Peti, W.
登録日2016-05-25
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.794 Å)
主引用文献Expanding the PP2A Interactome by Defining a B56-Specific SLiM.
Structure, 24, 2016
5K7Z
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BU of 5k7z by Molmil
Crystal structure of AibR in complex with isovaleryl coenzyme A and operator DNA
分子名称: DNA (32-MER), Isovaleryl-coenzyme A, Transcriptional regulator, ...
著者Bock, T, Volz, C, Mueller, R, Blankenfeldt, W.
登録日2016-05-27
公開日2016-12-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Crystal structure of AibR in complex with isovaleryl coenzyme A and operator DNA
to be published
5KG6
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BU of 5kg6 by Molmil
Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Ca2+ for 60s
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*A)-3'), ...
著者Gao, Y, Yang, W.
登録日2016-06-12
公開日2016-06-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science, 352, 2016
8U45
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Crystal Structure Analysis of Aspergillus fumigatus alkaline protease
分子名称: Alkaline protease 1, CALCIUM ION, CHLORIDE ION, ...
著者Fernandez, D, Diec, D.D.L, Guo, W, Russi, S.
登録日2023-09-08
公開日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Targeting Aspergillus allergen oryzin with a chemical probe at atomic precision.
Sci Rep, 13, 2023
8TWI
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BU of 8twi by Molmil
Cryo-EM structure of the PP2A:B55-FAM122A complex, PP2Ac body
分子名称: FE (III) ION, PPP2R1A-PPP2R2A-interacting phosphatase regulator 1, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
著者Fuller, J.R, Padi, S.K.R, Peti, W, Page, R.
登録日2023-08-21
公開日2023-11-01
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (2.69 Å)
主引用文献Cryo-EM structures of PP2A:B55-FAM122A and PP2A:B55-ARPP19.
Nature, 625, 2024
5JPE
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BU of 5jpe by Molmil
Yeast-specific serine/threonine protein phosphatase (PPZ1) of Candida albicans
分子名称: CITRATE ANION, GLYCEROL, Serine/threonine-protein phosphatase
著者Choy, M.S, Chen, E.H, Peti, W, Page, R.
登録日2016-05-03
公開日2016-08-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.611 Å)
主引用文献Molecular Insights into the Fungus-Specific Serine/Threonine Protein Phosphatase Z1 in Candida albicans.
Mbio, 7, 2016
8TWE
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BU of 8twe by Molmil
Cryo-EM structure of the PP2A:B55-FAM122A complex, B55 body
分子名称: PPP2R1A-PPP2R2A-interacting phosphatase regulator 1, Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
著者Fuller, J.R, Padi, S.K.R, Peti, W, Page, R.
登録日2023-08-21
公開日2023-11-01
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Cryo-EM structures of PP2A:B55-FAM122A and PP2A:B55-ARPP19.
Nature, 625, 2024
8TTB
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Cryo-EM structure of the PP2A:B55-ARPP19 complex
分子名称: FE (III) ION, Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
著者Fuller, J.R, Padi, S.K.R, Peti, W, Page, R.
登録日2023-08-13
公開日2023-10-25
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Cryo-EM structures of PP2A:B55-FAM122A and PP2A:B55-ARPP19.
Nature, 625, 2024

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件を2024-07-31に公開中

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