Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12895 results

3VLV
DownloadVisualize
BU of 3vlv by Molmil
Crystal structure of Sphingomonas sp. A1 alginate-binding ptotein AlgQ1 in complex with unsaturated triguluronate
Descriptor: 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid, AlgQ1, CALCIUM ION
Authors:Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2011-12-05
Release date:2012-01-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter
Biochemistry, 51, 2012
1PES
DownloadVisualize
BU of 1pes by Molmil
NMR SOLUTION STRUCTURE OF THE TETRAMERIC MINIMUM TRANSFORMING DOMAIN OF P53
Descriptor: TUMOR SUPPRESSOR P53
Authors:Lee, W, Harvey, T.S, Yin, Y, Yau, P, Litchfield, D, Arrowsmith, C.H.
Deposit date:1994-11-24
Release date:1995-02-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the tetrameric minimum transforming domain of p53.
Nat.Struct.Biol., 1, 1994
3CNV
DownloadVisualize
BU of 3cnv by Molmil
Crystal structure of the ligand-binding domain of a putative GntR-family transcriptional regulator from Bordetella bronchiseptica
Descriptor: CHLORIDE ION, CITRATE ANION, Putative GntR-family transcriptional regulator
Authors:Zimmerman, M.D, Xu, X, Cui, H, Filippova, E.V, Savchenko, A, Edwards, A.M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-03-26
Release date:2008-04-29
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the ligand-binding domain of a putative GntR-family transcriptional regulator from Bordetella bronchiseptica.
To be Published
3VMW
DownloadVisualize
BU of 3vmw by Molmil
Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate
Descriptor: Pectate lyase, SULFATE ION, alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
Authors:Zheng, Y, Huang, C.H, Liu, W, Ko, T.P, Xue, Y, Zhou, C, Zhang, G, Guo, R.T, Ma, Y.
Deposit date:2011-12-17
Release date:2012-07-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure and substrate-binding mode of a novel pectate lyase from alkaliphilic Bacillus sp. N16-5.
Biochem.Biophys.Res.Commun., 420, 2012
4ZGO
DownloadVisualize
BU of 4zgo by Molmil
Structure of C-terminally truncated Cdc123 from Schizosaccharomyces pombe
Descriptor: Cell division cycle protein 123
Authors:Panvert, M, Dubiez, E, Arnold, L, Perez, J, Seufert, W, Mechulam, Y, Schmitt, E.
Deposit date:2015-04-23
Release date:2015-09-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.063 Å)
Cite:Cdc123, a Cell Cycle Regulator Needed for eIF2 Assembly, Is an ATP-Grasp Protein with Unique Features.
Structure, 23, 2015
2IF8
DownloadVisualize
BU of 2if8 by Molmil
Crystal structure of Inositol Phosphate Multikinase Ipk2 in complex with ADP and Mn2+ from S. cerevisiae
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Inositol polyphosphate multikinase, ...
Authors:Holmes, W, Jogl, G.
Deposit date:2006-09-20
Release date:2006-10-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of inositol phosphate multikinase 2 and implications for substrate specificity.
J.Biol.Chem., 281, 2006
4YYA
DownloadVisualize
BU of 4yya by Molmil
The structure of hemagglutinin from a H6N1 influenza virus (A/Taiwan/2/2013) in complex with avian receptor analog 3'SLNLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HA1, HA2, ...
Authors:Wang, F, Qi, J, Bi, Y, Zhang, W, Wang, M, Wang, M, Liu, J, Yan, J, Shi, Y, Gao, G.F.
Deposit date:2015-03-23
Release date:2016-04-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.595 Å)
Cite:Structure of hemagglutinin from a H6N1 influenza virus (A/chicken/Taiwan/A2837/2013)
To Be Published
4ZG0
DownloadVisualize
BU of 4zg0 by Molmil
Crystal structure of Mouse Syndesmos protein
Descriptor: Protein syndesmos
Authors:Lee, I, Kim, H, Yoo, J, Cho, H, Lee, W.
Deposit date:2015-04-22
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Crystal structure of syndesmos and its interaction with Syndecan-4 proteoglycan
Biochem.Biophys.Res.Commun., 463, 2015
5A7Z
DownloadVisualize
BU of 5a7z by Molmil
Crystal structure of Sulfolobus acidocaldarius Trm10 at 2.1 angstrom resolution.
Descriptor: TRNA (ADENINE(9)-N1)-METHYLTRANSFERASE
Authors:Van Laer, B, Roovers, M, Wauters, L, Kasprzak, J, Dyzma, M, Deyaert, E, Feller, A, Bujnicki, J, Droogmans, L, Versees, W.
Deposit date:2015-07-10
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Functional Insights Into tRNA Binding and Adenosine N1-Methylation by an Archaeal Trm10 Homologue.
Nucleic Acids Res., 44, 2016
5AA9
DownloadVisualize
BU of 5aa9 by Molmil
Structure of L1198F Mutant Human Anaplastic Lymphoma Kinase in Complex with PF-06463922 ((10R)-7-amino-12-fluoro-2,10,16-trimethyl- 15-oxo-10,15,16,17-tetrahydro-2H-8,4-(metheno)pyrazolo(4,3-h)(2,5,11) benzoxadiazacyclotetradecine-3-carbonitrile).
Descriptor: (10R)-7-amino-12-fluoro-2,10,16-trimethyl-15-oxo-10,15,16,17-tetrahydro-2H-8,4-(metheno)pyrazolo[4,3-h][2,5,11]benzoxadiazacyclotetradecine-3-carbonitrile, ALK TYROSINE KINASE RECEPTOR
Authors:McTigue, M, Deng, Y.-L, Liu, W, Brooun, A, Stewart, A.
Deposit date:2015-07-23
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Resensitization to Crizotinib by the Lorlatinib Alk Resistance Mutation L1198F.
N.Engl.J.Med., 374, 2016
5AAB
DownloadVisualize
BU of 5aab by Molmil
Structure of C1156Y,L1198F Mutant Human Anaplastic Lymphoma Kinase in Complex with Crizotinib
Descriptor: 3-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]-5-(1-piperidin-4-yl-1H-pyrazol-4-yl)pyridin-2-amine, ALK TYROSINE KINASE RECEPTOR
Authors:McTigue, M, Deng, Y, Liu, W, Brooun, A, Stewart, A.
Deposit date:2015-07-23
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Resensitization to Crizotinib by the Lorlatinib Alk Resistance Mutation L1198F.
N.Engl.J.Med., 374, 2016
1PJP
DownloadVisualize
BU of 1pjp by Molmil
THE 2.2 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH SUCCINYL-ALA-ALA-PRO-PHE-CHLOROMETHYLKETONE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chymase, SUCCINYL-ALA-ALA-PRO-PHE-CHLOROMETHYLKETONE INHIBITOR, ...
Authors:Pereira, P.J.B, Wang, Z.M, Rubin, H, Huber, R, Bode, W, Schechter, N.M, Strobl, S.
Deposit date:1998-09-07
Release date:1999-03-02
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The 2.2 A crystal structure of human chymase in complex with succinyl-Ala-Ala-Pro-Phe-chloromethylketone: structural explanation for its dipeptidyl carboxypeptidase specificity.
J.Mol.Biol., 286, 1999
2IMW
DownloadVisualize
BU of 2imw by Molmil
Mechanism of Template-Independent Nucleotide Incorporation Catalyzed by a Template-Dependent DNA Polymerase
Descriptor: 1,2-ETHANEDIOL, 2',3'-dideoxyadenosine triphosphate, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3', ...
Authors:Ling, H, Yang, W.
Deposit date:2006-10-05
Release date:2007-01-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Mechanism of Template-independent Nucleotide Incorporation Catalyzed by a Template-dependent DNA Polymerase.
J.Mol.Biol., 365, 2007
5A1S
DownloadVisualize
BU of 5a1s by Molmil
Crystal structure of the sodium-dependent citrate symporter SeCitS form Salmonella enterica.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, CITRATE ANION, ...
Authors:Woehlert, D, Groetzinger, M.J, Kuhlbrandt, W, Yildiz, O.
Deposit date:2015-05-05
Release date:2016-02-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanism of Na(+)-dependent citrate transport from the structure of an asymmetrical CitS dimer.
Elife, 4, 2015
7YRS
DownloadVisualize
BU of 7yrs by Molmil
Crystal structure of Lactobacillus rhamnosus 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI complexed with MOPS
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase, ZINC ION
Authors:Yamamoto, Y, Oiki, S, Takase, R, Mikami, B, Hashimoto, W.
Deposit date:2022-08-10
Release date:2023-08-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Crystal Structures of Lacticaseibacillus 4-Deoxy-L- threo- 5-hexosulose-uronate Ketol-isomerase KduI in Complex with Substrate Analogs.
J Appl Glycosci (1999), 70, 2023
3IWH
DownloadVisualize
BU of 3iwh by Molmil
Crystal Structure of Rhodanese-like Domain Protein from Staphylococcus aureus
Descriptor: BETA-MERCAPTOETHANOL, Rhodanese-like domain protein
Authors:Kim, Y, Chruszcz, M, Minor, W, Edwards, A, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-09-02
Release date:2009-09-15
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Rhodanese-like Domain Protein from Staphylococcus aureus
To be Published
3IGO
DownloadVisualize
BU of 3igo by Molmil
Crystal structure of Cryptosporidium parvum CDPK1, cgd3_920
Descriptor: CALCIUM ION, Calmodulin-domain protein kinase 1, GLYCEROL, ...
Authors:Wernimont, A.K, Artz, J.D, Finnerty, P, Amani, M, Allali-Hassanali, A, Vedadi, M, Tempel, W, MacKenzie, F, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Weigelt, J, Bochkarev, A, Hui, R, Lin, Y.H, Structural Genomics Consortium (SGC)
Deposit date:2009-07-28
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of apicomplexan calcium-dependent protein kinases reveal mechanism of activation by calcium.
Nat.Struct.Mol.Biol., 17, 2010
2IS4
DownloadVisualize
BU of 2is4 by Molmil
Crystal structure of UvrD-DNA-ADPNP ternary complex
Descriptor: 25-MER, DNA helicase II, MAGNESIUM ION, ...
Authors:Yang, W, Lee, J.Y.
Deposit date:2006-10-16
Release date:2007-01-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke.
Cell(Cambridge,Mass.), 127, 2006
5ABT
DownloadVisualize
BU of 5abt by Molmil
S.enterica HisA mutant D7N, G102A, V106M, D176A
Descriptor: 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO) METHYLIDENE AMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE, [(2R,3S,4R,5R)-5-[4-aminocarbonyl-5-[(E)-[[(2R,3R,4S,5R)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]amino]methylideneamino]imidazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate
Authors:Guo, X, Soderholm, A, Newton, M, Nasvall, J, Andersson, D, Patrick, W, Selmer, M.
Deposit date:2015-08-08
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Protein Structures, Functions and Dynamics of Adaptive Evolution
To be Published
3III
DownloadVisualize
BU of 3iii by Molmil
1.95 Angstrom Crystal Structure of CocE/NonD family hydrolase (SACOL2612) from Staphylococcus aureus
Descriptor: CHLORIDE ION, CocE/NonD family hydrolase, NICKEL (II) ION, ...
Authors:Osinski, T, Chruszcz, M, Domagalski, M.J, Cymborowski, M, Shumilin, I.A, Skarina, T, Onopriyenko, O, Zimmerman, M.D, Savchenko, A, Edwards, A, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-08-01
Release date:2009-08-18
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:1.95 Angstrom Crystal Structure of CocE/NonD family hydrolase (SACOL2612) from Staphylococcus aureus
To be Published
5A5B
DownloadVisualize
BU of 5a5b by Molmil
Structure of the 26S proteasome-Ubp6 complex
Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
Authors:Aufderheide, A, Beck, F, Stengel, F, Hartwig, M, Schweitzer, A, Pfeifer, G, Goldberg, A.L, Sakata, E, Baumeister, W, Foerster, F.
Deposit date:2015-06-17
Release date:2015-07-22
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Structural Characterization of the Interaction of Ubp6 with the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 112, 2015
7YW1
DownloadVisualize
BU of 7yw1 by Molmil
crystal structure of UBE2O
Descriptor: (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O
Authors:Fu, Z, Zhu, W, Huang, H.
Deposit date:2022-08-20
Release date:2023-08-30
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:crystal structure of UBE2O
To Be Published
3D26
DownloadVisualize
BU of 3d26 by Molmil
Norwalk P domain A-trisaccharide complex
Descriptor: 58 kd capsid protein, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)]beta-D-galactopyranose
Authors:Hegde, R, Bu, W.
Deposit date:2008-05-07
Release date:2008-06-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
3VSH
DownloadVisualize
BU of 3vsh by Molmil
Crystal structure of native 1,6-APD (with Iron), 2-Animophenol-1,6-Dioxygenase
Descriptor: 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit, 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit, FE (II) ION
Authors:Li, D.F, Hou, Y.J, Hu, Y, Wang, D.C, Liu, W.
Deposit date:2012-04-25
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
7YRR
DownloadVisualize
BU of 7yrr by Molmil
Cryo-EM structure of IGF1R with two IGF1 complex
Descriptor: Insulin-like growth factor 1 receptor, Isoform 3 of Insulin-like growth factor I
Authors:Xi, Z, Cang, W.
Deposit date:2022-08-10
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-EM structure of IGF1R with two IGF1 complex at 4.3 angstroms resolution
To Be Published

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon