Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate

Summary for 3VMW

DescriptorPectate lyase, alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid, SULFATE ION, ... (4 entities in total)
Functional Keywordspolysaccharide lyase family 1, pectate lyase, beta-helix, pectolytic, polygalacturonate, lyase
Biological sourceBacillus
Total number of polymer chains1
Total molecular weight37005.84
Zheng, Y.,Huang, C.H.,Liu, W.,Ko, T.P.,Xue, Y.,Zhou, C.,Zhang, G.,Guo, R.T.,Ma, Y. (deposition date: 2011-12-17, release date: 2012-07-25, Last modification date: 2020-07-29)
Primary citation
Zheng, Y.,Huang, C.H.,Liu, W.,Ko, T.P.,Xue, Y.,Zhou, C.,Guo, R.T.,Ma, Y.
Crystal structure and substrate-binding mode of a novel pectate lyase from alkaliphilic Bacillus sp. N16-5.
Biochem.Biophys.Res.Commun., 420:269-274, 2012
PubMed: 22414692 (PDB entries with the same primary citation)
DOI: 10.1016/j.bbrc.2012.02.148
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.14960 1.5% 3.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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PDB entries from 2020-09-23