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PDB: 12479 results

2AFP
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THE SOLUTION STRUCTURE OF TYPE II ANTIFREEZE PROTEIN REVEALS A NEW MEMBER OF THE LECTIN FAMILY
Descriptor: PROTEIN (SEA RAVEN TYPE II ANTIFREEZE PROTEIN)
Authors:Gronwald, W, Loewen, M.C, Lix, B, Daugulis, A.J, Sonnichsen, F.D, Davies, P.L, Sykes, B.D.
Deposit date:1998-12-14
Release date:1998-12-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The solution structure of type II antifreeze protein reveals a new member of the lectin family.
Biochemistry, 37, 1998
2A0X
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Structure of human purine nucleoside phosphorylase H257F mutant
Descriptor: 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one, Purine nucleoside phosphorylase, SULFATE ION
Authors:Murkin, A.S, Shi, W, Schramm, V.L.
Deposit date:2005-06-17
Release date:2006-06-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Neighboring group participation in the transition state of human purine nucleoside phosphorylase.
Biochemistry, 46, 2007
2A9J
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Human bisphosphoglycerate mutase complexed with 3-phosphoglycerate (17 days)
Descriptor: 3-PHOSPHOGLYCERIC ACID, Bisphosphoglycerate mutase
Authors:Wang, Y, Gong, W.
Deposit date:2005-07-11
Release date:2006-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Seeing the process of histidine phosphorylation in human bisphosphoglycerate mutase
J.Biol.Chem., 281, 2006
2AJB
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Porcine dipeptidyl peptidase IV (CD26) in complex with the tripeptide tert-butyl-Gly-L-Pro-L-Ile (tBu-GPI)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-methyl-L-valyl-L-prolyl-L-isoleucine, ...
Authors:Engel, M, Hoffmann, T, Manhart, S, Heiser, U, Chambre, S, Huber, R, Demuth, H.U, Bode, W.
Deposit date:2005-08-01
Release date:2006-02-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Rigidity and flexibility of dipeptidyl peptidase IV: crystal structures of and docking experiments with DPIV.
J.Mol.Biol., 355, 2006
2AR6
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Pterocarpus angolensis Lectin (PAL) In Complex With The Pentasaccharide M592
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose, CALCIUM ION, ...
Authors:Buts, L, Garcia-Pino, A, Imberty, A, Amiot, N, Boons, G.J, Beeckmans, S, Versees, W, Wyns, L, Loris, R.
Deposit date:2005-08-19
Release date:2006-08-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin.
Febs J., 273, 2006
2AV9
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Crystal Structure of the PA5185 protein from Pseudomonas Aeruginosa Strain PAO1.
Descriptor: SULFATE ION, Thioesterase
Authors:Chruszcz, M, Wang, S, Cymborowski, M, Kudritska, M, Evdokimova, E, Edwards, A, Savchenko, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-08-29
Release date:2005-10-18
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Function-biased choice of additives for optimization of protein crystallization - the case of the putative thioesterase PA5185 from Pseudomonas aeruginosa PAO1.
Cryst.Growth Des., 8, 2008
2AXT
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Crystal Structure of Photosystem II from Thermosynechococcus elongatus
Descriptor: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Loll, B, Kern, J, Saenger, W, Zouni, A, Biesiadka, J.
Deposit date:2005-09-06
Release date:2005-12-27
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Towards complete cofactor arrangement in the 3.0 A resolution structure of photosystem II
NATURE, 438, 2005
2AXL
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Solution structure of a multifunctional DNA- and protein-binding domain of human Werner syndrome protein
Descriptor: Werner syndrome
Authors:Hu, J.-S, Feng, H, Zeng, W, Lin, G.-X, Xi, X.G.
Deposit date:2005-09-05
Release date:2005-12-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a multifunctional DNA- and protein-binding motif of human Werner syndrome protein.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2AI2
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Purine nucleoside phosphorylase from calf spleen
Descriptor: ((2S,3AS,4R,6S)-4-(HYDROXYMETHYL)-6-(4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-TETRAHYDROFURO[3,4-D][1,3]DIOXO L-2-YL)METHYLPHOSPHONIC ACID, MAGNESIUM ION, Purine nucleoside phosphorylase, ...
Authors:Toms, A.V, Wang, W, Li, Y, Ganem, B, Ealick, S.E.
Deposit date:2005-07-28
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Novel multisubstrate inhibitors of mammalian purine nucleoside phosphorylase.
Acta Crystallogr.,Sect.D, 61, 2005
2AJF
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Structure of SARS coronavirus spike receptor-binding domain complexed with its receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme-Related Carboxypeptidase (Ace2), CHLORIDE ION, ...
Authors:Li, F, Li, W, Farzan, M, Harrison, S.C.
Deposit date:2005-08-01
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of SARS coronavirus spike receptor-binding domain complexed with receptor.
Science, 309, 2005
2ATG
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NMR structure of Retrocyclin-2 in SDS
Descriptor: Retrocyclin-2
Authors:Daly, N.L, Chen, Y.K, Rosengren, K.J, Marx, U.C, Phillips, M.L, Waring, A.J, Wang, W, Lehrer, R.I, Craik, D.J.
Deposit date:2005-08-24
Release date:2005-09-06
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Retrocyclin-2: structural analysis of a potent anti-HIV theta-defensin
Biochemistry, 46, 2007
2B0R
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Crystal Structure of Cyclase-Associated Protein from Cryptosporidium parvum
Descriptor: UNKNOWN ATOM OR ION, possible adenyl cyclase-associated protein
Authors:Tempel, W, Dong, A, Zhao, Y, Lew, J, Kozieradzki, I, Alam, Z, Melone, M, Wasney, G, Vedadi, M, Arrowsmith, C, Edwards, A, Weigelt, J, Sundstrom, M, Hui, R, Bochkarev, A, Artz, J, Structural Genomics Consortium (SGC)
Deposit date:2005-09-14
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and function of a G-actin sequestering protein with a vital role in malaria oocyst development inside the mosquito vector
J.Biol.Chem., 151, 2010
2AOR
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Crystal structure of MutH-hemimethylated DNA complex
Descriptor: 5'-D(*CP*AP*GP*GP*(6MA)P*TP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*AP*TP*CP*CP*TP*G)-3', CALCIUM ION, DNA mismatch repair protein mutH
Authors:Lee, J.Y, Chang, J, Joseph, N, Ghirlando, R, Rao, D.N, Yang, W.
Deposit date:2005-08-13
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:MutH complexed with hemi- and unmethylated DNAs: coupling base recognition and DNA cleavage.
Mol.Cell, 20, 2005
2ARE
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BU of 2are by Molmil
Pterocarpus angolensis Lectin (PAL) In Complex With D-Mannose (anomeric mixture)
Descriptor: CALCIUM ION, MANGANESE (II) ION, alpha-D-mannopyranose, ...
Authors:Buts, L, Garcia-Pino, A, Imberty, A, Amiot, N, Boons, G.-J, Versees, W, Lah, J, Beeckmans, S, Wyns, L, Loris, R.
Deposit date:2005-08-19
Release date:2006-08-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin.
Febs J., 273, 2006
1SOL
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A PIP2 AND F-ACTIN-BINDING SITE OF GELSOLIN, RESIDUE 150-169 (NMR, AVERAGED STRUCTURE)
Descriptor: GELSOLIN (150-169)
Authors:Xian, W, Vegners, R, Janmey, P.A, Braunlin, W.H.
Deposit date:1995-09-29
Release date:1996-03-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Spectroscopic studies of a phosphoinositide-binding peptide from gelsolin: behavior in solutions of mixed solvent and anionic micelles.
Biophys.J., 69, 1995
4OLQ
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BU of 4olq by Molmil
Crystal Structure of a Putative enoyl-CoA hydratase/isomerase family protein from Hyphomonas neptunium
Descriptor: D-MALATE, DI(HYDROXYETHYL)ETHER, Enoyl-CoA hydratase/isomerase family protein, ...
Authors:Szlachta, K, Cooper, D.R, Chapman, H.C, Cymborowski, M.T, Stead, M, Hillerich, B, Ahmed, M, Bonanno, J.B, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-01-24
Release date:2014-03-12
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of a Putative enoyl-CoA hydratase/isomerase family protein from Hyphomonas neptunium
To be Published
2LIT
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NMR Solution Structure of Yeast Iso-1-cytochrome c Mutant P71H in reduced states
Descriptor: Cytochrome c iso-1, HEME C
Authors:Lan, W, Wang, Z, Yang, Z, Zhu, J, Ying, T, Jiang, X, Zhang, X, Wu, H, Liu, M, Tan, X, Cao, C, Huang, Z.X.
Deposit date:2011-08-31
Release date:2011-12-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Conformational toggling of yeast iso-1-cytochrome C in the oxidized and reduced States.
Plos One, 6, 2011
4O6L
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Crystal Structure of TTK kinase domain with an inhibitor: 401498 (N-[(1R)-1-(2-chlorophenyl)propyl]-3-{4-[(1-methylpiperidin-4-yl)oxy]phenyl}-1H-indazole-5-carboxamide)
Descriptor: Dual specificity protein kinase TTK, GLYCEROL, N-[(1R)-1-(2-chlorophenyl)propyl]-3-{4-[(1-methylpiperidin-4-yl)oxy]phenyl}-1H-indazole-5-carboxamide
Authors:Qiu, W, Plotnikova, O, Feher, M, Awrey, D.E, Chirgadze, N.Y.
Deposit date:2013-12-22
Release date:2014-12-24
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal Structure of TTK kinase domain with an inhibitor: 401498
TO BE PUBLISHED
4O9R
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Human Smoothened Receptor structure in complex with cyclopamine
Descriptor: Cyclopamine, Smoothened homolog/Soluble cytochrome b562 chimeric protein
Authors:Wang, C, Weierstall, U, James, D, White, T.A, Wang, D, Liu, W, Spence, J.C.H, Doak, R.B, Nelson, G, Fromme, P, Fromme, R, Grotjohann, I, Kupitz, C, Zatsepin, N.A, Liu, H, Basu, S, Wacker, D, Han, G.W, Katritch, V, Boutet, S, Messerschmidt, M, Willams, G.J, Koglin, J.E, Seibert, M.M, Klinker, M, Gati, C, Shoeman, R.L, Barty, A, Chapman, H.N, Kirian, R.A, Beyerlein, K.R, Stevens, R.C, Li, D, Shah, S.T.A, Howe, N, Caffrey, M, Cherezov, V, GPCR Network (GPCR)
Deposit date:2014-01-02
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.204 Å)
Cite:Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography.
Nat Commun, 5, 2014
4OBY
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Crystal Structure of E.coli Arginyl-tRNA Synthetase and Ligand Binding Studies Revealed Key Residues in Arginine Recognition
Descriptor: ARGININE, Arginine--tRNA ligase
Authors:Bi, K, Zheng, Y, Dong, J, Gao, F, Wang, J, Wang, Y, Gong, W.
Deposit date:2014-01-08
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.574 Å)
Cite:Crystal structure of E. coli arginyl-tRNA synthetase and ligand binding studies revealed key residues in arginine recognition.
Protein Cell, 5, 2014
2LPE
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Solution NMR Structure of the KSR1 CA1-CA1a domain
Descriptor: Kinase suppressor of Ras 1
Authors:Koveal, D, Peti, W, Page, R.
Deposit date:2012-02-11
Release date:2012-12-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A CC-SAM, for Coiled Coil Sterile a Motif, Domain Targets the Scaffold KSR-1 to Specific Sites in the Plasma Membrane
SCI.SIGNAL., 5, 2012
2LOP
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Backbone structure of human membrane protein TMEM14A
Descriptor: Transmembrane protein 14A
Authors:Eichmann, C, Klammt, C, Maslennikov, I, Kwiatkowski, W, Riek, R, Choe, S.
Deposit date:2012-01-26
Release date:2012-05-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Facile backbone structure determination of human membrane proteins by NMR spectroscopy.
Nat.Methods, 9, 2012
4O8P
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Crystal structure of SthAraf62A, a GH62 family alpha-L-arabinofuranosidase from Streptomyces thermoviolaceus, bound to xylotetraose
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Alpha-L-arabinofuranosidase, CALCIUM ION, ...
Authors:Stogios, P.J, Wang, W, Xu, X, Cui, H, Master, E, Savchenko, A.
Deposit date:2013-12-28
Release date:2014-07-02
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (1.557 Å)
Cite:Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family GH62 alpha-l-arabinofuranosidase from Streptomyces thermoviolaceus.
Appl.Environ.Microbiol., 80, 2014
3PNW
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Crystal Structure of the tudor domain of human TDRD3 in complex with an anti-TDRD3 FAB
Descriptor: FAB heavy chain, FAB light chain, Tudor domain-containing protein 3, ...
Authors:Loppnau, P, Tempel, W, Wernimont, A.K, Lam, R, Ravichandran, M, Adams-Cioaba, M.A, Persson, H, Sidhu, S.S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Cossar, D, Structural Genomics Consortium (SGC)
Deposit date:2010-11-19
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:CDR-H3 Diversity Is Not Required for Antigen Recognition by Synthetic Antibodies.
J.Mol.Biol., 425, 2013
4OHU
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Crystal structure of Mycobacterium tuberculosis InhA in complex with inhibitor PT92
Descriptor: 2-(2-bromophenoxy)-5-hexylphenol, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Li, H.J, Pan, P, Lai, C.T, Liu, N, Yu, W, Garcia-Diaz, M, Simmerling, C, Tonge, P.J.
Deposit date:2014-01-18
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:A Structural and Energetic Model for the Slow-Onset Inhibition of the Mycobacterium tuberculosis Enoyl-ACP Reductase InhA.
Acs Chem.Biol., 9, 2014

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