Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12487 件

4KOR
DownloadVisualize
BU of 4kor by Molmil
Crystal structure of a GNAT superfamily acetyltransferase PA4794 in complex with 7-aminocephalosporanic acid
分子名称: 1,2-ETHANEDIOL, 7-aminocephalosporanic acid, SULFATE ION, ...
著者Majorek, K.A, Porebski, P.J, Chruszcz, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2013-05-12
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural, Functional, and Inhibition Studies of a Gcn5-related N-Acetyltransferase (GNAT) Superfamily Protein PA4794: A NEW C-TERMINAL LYSINE PROTEIN ACETYLTRANSFERASE FROM PSEUDOMONAS AERUGINOSA.
J.Biol.Chem., 288, 2013
4KOV
DownloadVisualize
BU of 4kov by Molmil
Crystal structure of a GNAT superfamily acetyltransferase PA4794 in complex with Cefuroxime
分子名称: (6R,7R)-3-[(carbamoyloxy)methyl]-7-{[(2Z)-2-(furan-2-yl)-2-(methoxyimino)acetyl]amino}-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid, 1,2-ETHANEDIOL, SULFATE ION, ...
著者Majorek, K.A, Chruszcz, M, Otwinowski, Z, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2013-05-12
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural, Functional, and Inhibition Studies of a Gcn5-related N-Acetyltransferase (GNAT) Superfamily Protein PA4794: A NEW C-TERMINAL LYSINE PROTEIN ACETYLTRANSFERASE FROM PSEUDOMONAS AERUGINOSA.
J.Biol.Chem., 288, 2013
3TI9
DownloadVisualize
BU of 3ti9 by Molmil
Crystal structure of the basic protease BprB from the ovine footrot pathogen, Dichelobacter nodosus
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Wong, W, Whisstock, J.C, Porter, C.J.
登録日2011-08-20
公開日2011-10-19
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献S1 Pocket of a Bacterially Derived Subtilisin-like Protease Underpins Effective Tissue Destruction.
J.Biol.Chem., 286, 2011
4HCS
DownloadVisualize
BU of 4hcs by Molmil
Structure of Novel subfamily CX chemokine solved by sulfur SAD
分子名称: Uncharacterized protein
著者Rajasekaran, D, Fan, C, Meng, W, Pflugrath, J.W, Lolis, E.J.
登録日2012-10-01
公開日2013-10-16
最終更新日2014-04-23
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Structural insight into the evolution of a new chemokine family from zebrafish.
Proteins, 82, 2014
4HE6
DownloadVisualize
BU of 4he6 by Molmil
Crystal structure of the C-terminal domain of Geobacillus thermoleovorans putative U32 peptidase
分子名称: ACETATE ION, Peptidase family U32, UNKNOWN ATOM OR ION
著者Trillo-Muyo, S, Jasilionis, A, Domagalski, M.J, Chruszcz, M, Minor, W, Kuisiene, N, Arolas, J.L, Sola, M, Gomis-Ruth, F.X.
登録日2012-10-03
公開日2012-11-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Ultratight crystal packing of a 10 kDa protein.
Acta Crystallogr.,Sect.D, 69, 2013
3TSH
DownloadVisualize
BU of 3tsh by Molmil
Crystal structure of Phl p 4, a grass pollen allergen with glucose dehydrogenase activity
分子名称: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, FORMIC ACID, MALONATE ION, ...
著者Zafred, D, Nandy, A, Keller, W.
登録日2011-09-13
公開日2012-09-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure and immunologic characterization of the major grass pollen allergen Phl p 4.
J. Allergy Clin. Immunol., 132, 2013
3U09
DownloadVisualize
BU of 3u09 by Molmil
Crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (FabG)(G92D) from Vibrio cholerae
分子名称: 3-oxoacyl-[acyl-carrier-protein] reductase FabG, SULFATE ION, UNKNOWN ATOM OR ION
著者Hou, J, Chruszcz, M, Zheng, H, Grabowski, M, Fratczak, Z, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-09-28
公開日2011-10-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Dissecting the Structural Elements for the Activation of beta-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae.
J.Bacteriol., 198, 2015
4GTO
DownloadVisualize
BU of 4gto by Molmil
FTase in complex with BMS analogue 14
分子名称: 4-({(3R)-7-cyano-4-[(4-methoxyphenyl)sulfonyl]-1-[(1-methyl-1H-imidazol-5-yl)methyl]-2,3,4,5-tetrahydro-1H-1,4-benzodiazepin-3-yl}methyl)phenyl trifluoromethanesulfonate, DIMETHYL SULFOXIDE, FARNESYL DIPHOSPHATE, ...
著者Guo, Z, Stigter, E.A, Bon, R.S, Waldmann, H, Blankenfeldt, W, Goody, R.S.
登録日2012-08-29
公開日2012-10-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Development of Selective, Potent RabGGTase Inhibitors
J.Med.Chem., 55, 2012
4GTT
DownloadVisualize
BU of 4gtt by Molmil
Engineered RabGGTase in complex with BMS analogue 12
分子名称: 4-({(3R)-7-cyano-4-[(4-methoxyphenyl)sulfonyl]-1-[(1-methyl-1H-imidazol-5-yl)methyl]-2,3,4,5-tetrahydro-1H-1,4-benzodiazepin-3-yl}methyl)phenyl benzylcarbamate, CALCIUM ION, Geranylgeranyl transferase type-2 subunit alpha, ...
著者Guo, Z, Stigter, E.A, Bon, R.S, Waldmann, H, Blankenfeldt, W, Goody, R.S.
登録日2012-08-29
公開日2012-10-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Development of Selective, Potent RabGGTase Inhibitors
J.Med.Chem., 55, 2012
4GWF
DownloadVisualize
BU of 4gwf by Molmil
Crystal structure of the tyrosine phosphatase SHP-2 with Y279C mutation
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Qiu, W, Lin, A, Hutchinson, A, Romanov, V, Ruzanov, M, Thompson, C, Lam, K, Kisselman, G, Battaile, K, Chirgadze, N.Y.
登録日2012-09-03
公開日2013-09-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the tyrosine phosphatase SHP-2 with Y279C mutation
TO BE PUBLISHED
4GX0
DownloadVisualize
BU of 4gx0 by Molmil
Crystal structure of the GsuK L97D mutant
分子名称: CALCIUM ION, PHOSPHATE ION, POTASSIUM ION, ...
著者Kong, C, Zeng, W, Ye, S, Chen, L, Sauer, D.B, Lam, Y, Derebe, M.G, Jiang, Y.
登録日2012-09-03
公開日2012-12-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.
elife, 1, 2012
3TF2
DownloadVisualize
BU of 3tf2 by Molmil
Crystal structure of the cap free human translation initiation factor eIF4E
分子名称: Eukaryotic translation initiation factor 4E, UNKNOWN ATOM OR ION
著者Siddiqui, N, Tempel, W, Nedyalkova, L, Wernimont, A.K, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Borden, K.L.B, Park, H, Structural Genomics Consortium (SGC)
登録日2011-08-15
公開日2011-08-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into the allosteric effects of 4EBP1 on the eukaryotic translation initiation factor eIF4E.
J.Mol.Biol., 415, 2012
3TFL
DownloadVisualize
BU of 3tfl by Molmil
LytR-Cps2a-Psr family protein with bound octaprenyl pyrophosphate lipid
分子名称: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl trihydrogen diphosphate, 1,2-ETHANEDIOL, CPS2A, ...
著者Kawai, Y, Marles-Wright, J, Cleverley, R.M, Emmins, R, Ishikawa, S, Kuwano, M, Heinz, N, Khai Bui, N, Hoyland, C.N, Ogasawara, N, Lewis, R.J, Vollmer, W, Daniel, R.A, Errington, J.
登録日2011-08-16
公開日2011-10-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A widespread family of bacterial cell wall assembly proteins.
Embo J., 30, 2011
3TAN
DownloadVisualize
BU of 3tan by Molmil
Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to Duplex DNA with Cytosine-Adenine Mismatch at (n-1) Position
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*AP*CP*GP*T*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*C)-3', ...
著者Wang, W, Beese, L.S.
登録日2011-08-04
公開日2011-10-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis.
Proc.Natl.Acad.Sci.USA, 108, 2011
3TEL
DownloadVisualize
BU of 3tel by Molmil
LytR-CPS2A-Psr family protein with bound octaprenyl pyrophosphate lipid and manganese ion
分子名称: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl trihydrogen diphosphate, 1,2-ETHANEDIOL, ACETATE ION, ...
著者Kawai, Y, Marles-Wright, J, Cleverley, R.M, Emmins, R, Ishikawa, S, Kuwano, M, Heinz, N, Khai Bui, N, Hoyland, C.N, Ogasawara, N, Lewis, R.J, Vollmer, W, Daniel, R.A, Errington, J.
登録日2011-08-15
公開日2011-10-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A widespread family of bacterial cell wall assembly proteins.
Embo J., 30, 2011
3TET
DownloadVisualize
BU of 3tet by Molmil
Crystal Structure of NaK2K Channel Y66F Mutant
分子名称: POTASSIUM ION, Potassium channel protein
著者Sauer, D.B, Zeng, W, Raghunathan, S, Jiang, Y.
登録日2011-08-15
公開日2011-10-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Protein interactions central to stabilizing the K+ channel selectivity filter in a four-sited configuration for selective K+ permeation.
Proc.Natl.Acad.Sci.USA, 108, 2011
4K2H
DownloadVisualize
BU of 4k2h by Molmil
Crystal structure of C103A mutant of DJ-1 superfamily protein STM1931 from Salmonella typhimurium
分子名称: Intracellular protease/amidase, ZINC ION
著者Shumilin, I.A, Niedzialkowska, E, Domagalski, M.J, Stam, J, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-04-09
公開日2013-04-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of C103A mutant of DJ-1 superfamily protein STM1931 from Salmonella typhimurium
TO BE PUBLISHED
3TEP
DownloadVisualize
BU of 3tep by Molmil
LytR-CPS2a-Psr family protein with bound octaprenyl pyrophosphate lipid and magnesium ion
分子名称: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl trihydrogen diphosphate, 1,2-ETHANEDIOL, CPS2A, ...
著者Kawai, Y, Marles-Wright, J, Cleverley, R.M, Emmins, R, Ishikawa, S, Kuwano, M, Heinz, N, Khai Bui, N, Hoyland, C.N, Ogasawara, N, Lewis, R.J, Vollmer, W, Daniel, R.A, Errington, J.
登録日2011-08-15
公開日2011-10-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献A widespread family of bacterial cell wall assembly proteins.
Embo J., 30, 2011
4K63
DownloadVisualize
BU of 4k63 by Molmil
Structure of an avian influenza H5 hemagglutinin from the influenza virus complexed with avian receptor analog LSTa
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, ...
著者Zhang, W, Shi, Y, Lu, X, Shu, Y, Qi, J, Gao, G.F.
登録日2013-04-15
公開日2013-05-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献An airborne transmissible avian influenza H5 hemagglutinin seen at the atomic level.
Science, 340, 2013
3TH8
DownloadVisualize
BU of 3th8 by Molmil
Structure of E. coli undecaprenyl diphosphate synthase complexed with BPH-1063
分子名称: (2Z)-4-({3-[3-(hexyloxy)phenyl]propyl}amino)-2-hydroxy-4-oxobut-2-enoic acid, Undecaprenyl pyrophosphate synthase
著者Cao, R, Zhu, W, Zhang, Y, Oldfield, E.
登録日2011-08-18
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.114 Å)
主引用文献HIV-1 Integrase Inhibitor-Inspired Antibacterials Targeting Isoprenoid Biosynthesis.
ACS Med Chem Lett, 3, 2012
3THX
DownloadVisualize
BU of 3thx by Molmil
Human MutSbeta complexed with an IDL of 3 bases (Loop3) and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA Loop3 minus strand, DNA Loop3 plus strand, ...
著者Yang, W.
登録日2011-08-19
公開日2011-12-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mechanism of mismatch recognition revealed by human MutSbeta bound to unpaired DNA loops
Nat.Struct.Mol.Biol., 19, 2012
3THV
DownloadVisualize
BU of 3thv by Molmil
Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to DNA and ddATP-dT in Closed Conformation
分子名称: 2',3'-dideoxyadenosine triphosphate, 5'-D(*C*AP*TP*TP*TP*GP*AP*GP*TP*CP*AP*GP*G)-3', 5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(2DA))-3', ...
著者Wang, W, Beese, L.S.
登録日2011-08-19
公開日2011-10-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.611 Å)
主引用文献Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis.
Proc.Natl.Acad.Sci.USA, 108, 2011
4KGQ
DownloadVisualize
BU of 4kgq by Molmil
Crystal structure of a human light loop mutant in complex with dcr3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Tumor necrosis factor ligand superfamily member 14, ...
著者Liu, W, Zhan, C, Bonanno, J.B, Sampathkumar, P, Toro, R, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
登録日2013-04-29
公開日2013-07-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Mechanistic basis for functional promiscuity in the TNF and TNF receptor superfamilies: structure of the LIGHT:DcR3 assembly.
Structure, 22, 2014
4KNF
DownloadVisualize
BU of 4knf by Molmil
Crystal structure of a blue-light absorbing proteorhodopsin double-mutant D97N/Q105L from HOT75
分子名称: Blue-light absorbing proteorhodopsin, RETINAL
著者Ran, T, Ozorowski, G, Gao, Y, Wang, W, Luecke, H.
登録日2013-05-09
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes.
Acta Crystallogr.,Sect.D, 69, 2013
4KO7
DownloadVisualize
BU of 4ko7 by Molmil
Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/W48F/V95I)
分子名称: Azurin, COPPER (II) ION
著者Inampudi, K.K, Meng, W, Tobin, P.H, Wilson, C.J.
登録日2013-05-11
公開日2014-05-14
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/W48F/V95I)
To be Published

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon