Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1015 results

3K0X
DownloadVisualize
BU of 3k0x by Molmil
Crystal structure of telomere capping protein Ten1 from Saccharomyces pombe
Descriptor: IODIDE ION, Protein Ten1
Authors:Gelinas, A.D, Reyes, F.E, Batey, R.T, Wuttke, D.S.
Deposit date:2009-09-25
Release date:2009-10-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Telomere capping proteins are structurally related to RPA with an additional telomere-specific domain.
Proc.Natl.Acad.Sci.USA, 106, 2009
3RH1
DownloadVisualize
BU of 3rh1 by Molmil
X-ray Structure of a cis-proline (P114) to alanine variant of Ribonuclease A
Descriptor: CHLORIDE ION, Ribonuclease pancreatic
Authors:Merlino, A, Balsamo, A, Mazzarella, L, Sica, F.
Deposit date:2011-04-11
Release date:2012-02-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Chain termini cross-talk in the swapping process of bovine pancreatic ribonuclease.
Biochimie, 94, 2012
1HCG
DownloadVisualize
BU of 1hcg by Molmil
STRUCTURE OF HUMAN DES(1-45) FACTOR XA AT 2.2 ANGSTROMS RESOLUTION
Descriptor: BLOOD COAGULATION FACTOR XA
Authors:Tulinsky, A, Padmanabhan, K.
Deposit date:1993-05-05
Release date:1995-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of human des(1-45) factor Xa at 2.2 A resolution.
J.Mol.Biol., 232, 1993
1HAI
DownloadVisualize
BU of 1hai by Molmil
THE ISOMORPHOUS STRUCTURES OF PRETHROMBIN2, HIRUGEN-AND PPACK-THROMBIN: CHANGES ACCOMPANYING ACTIVATION AND EXOSITE BINDING TO THROMBIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), ...
Authors:Tulinsky, A, Vijayalakshmi, J.
Deposit date:1994-06-27
Release date:1994-12-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The isomorphous structures of prethrombin2, hirugen-, and PPACK-thrombin: changes accompanying activation and exosite binding to thrombin.
Protein Sci., 3, 1994
7B70
DownloadVisualize
BU of 7b70 by Molmil
TRAPPCore plus C8 (355-596) and C11 (1-718) from MiniTRAPPIII
Descriptor: FI18195p1, GEO08327p1, Probable trafficking protein particle complex subunit 2, ...
Authors:Galindo, A, Munro, S, Planelles-Herrero, V.J.
Deposit date:2020-12-09
Release date:2021-06-09
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structure of metazoan TRAPPIII, the multi-subunit complex that activates the GTPase Rab1.
Embo J., 40, 2021
7B6E
DownloadVisualize
BU of 7b6e by Molmil
Drosophila melanogaster TRAPP C8 subunits region 355 to 661
Descriptor: FI18195p1
Authors:Galindo, A, Munro, S, Planelles-Herrero, V.J, Degliesposti, G.
Deposit date:2020-12-07
Release date:2021-06-09
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-EM structure of metazoan TRAPPIII, the multi-subunit complex that activates the GTPase Rab1.
Embo J., 40, 2021
7B6R
DownloadVisualize
BU of 7b6r by Molmil
Drosophila melanogaster TRAPPIII partial complex: core plus C8 and C11 attached region
Descriptor: FI18195p1, GEO08327p1, Probable trafficking protein particle complex subunit 2, ...
Authors:Galindo, A, Munro, S, Planelles-Herrero, V.J, Degliesposti, G.
Deposit date:2020-12-08
Release date:2021-06-09
Last modified:2021-07-28
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Cryo-EM structure of metazoan TRAPPIII, the multi-subunit complex that activates the GTPase Rab1.
Embo J., 40, 2021
7B6D
DownloadVisualize
BU of 7b6d by Molmil
Drosophila melanogaster TRAPPCore (C1, C2, C2L, C3a/b, C4, C5, C6 subunits)
Descriptor: GEO08327p1, Probable trafficking protein particle complex subunit 2, TRAPPC2L, ...
Authors:Galindo, A, Munro, S, Planelles-Herrero, V.J, Degliesposti, G.
Deposit date:2020-12-07
Release date:2021-06-09
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.27 Å)
Cite:Cryo-EM structure of metazoan TRAPPIII, the multi-subunit complex that activates the GTPase Rab1.
Embo J., 40, 2021
7B6H
DownloadVisualize
BU of 7b6h by Molmil
Drosophila melanogaster TRAPP C11 subunits region 1 to 718
Descriptor: Trafficking protein particle complex subunit 11
Authors:Galindo, A, Munro, S, Planelles-Herrero, V.J, Degliesposti, G.
Deposit date:2020-12-07
Release date:2021-06-09
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (5.4 Å)
Cite:Cryo-EM structure of metazoan TRAPPIII, the multi-subunit complex that activates the GTPase Rab1.
Embo J., 40, 2021
2KDD
DownloadVisualize
BU of 2kdd by Molmil
Solution structure of the conserved C-terminal dimerization domain of Borealin
Descriptor: Borealin
Authors:Lingel, A, Bourhis, E, Cochran, A.G, Fairbrother, W.J.
Deposit date:2009-01-06
Release date:2009-06-30
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Phosphorylation of a borealin dimerization domain is required for proper chromosome segregation.
Biochemistry, 48, 2009
2KLL
DownloadVisualize
BU of 2kll by Molmil
Solution structure of human interleukin-33
Descriptor: Interleukin-33
Authors:Lingel, A, Fairbrother, W.
Deposit date:2009-07-06
Release date:2009-11-17
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structure of IL-33 and its interaction with the ST2 and IL-1RAcP receptors--insight into heterotrimeric IL-1 signaling complexes.
Structure, 17, 2009
6F60
DownloadVisualize
BU of 6f60 by Molmil
The x-ray structure of bovine pancreatic ribonuclease in complex with a five-coordinate platinum(II) compound containing a sugar ligand
Descriptor: Ribonuclease pancreatic, SULFATE ION, five-coordinate platinum(II) compound
Authors:Merlino, A, Ferraro, G.
Deposit date:2017-12-04
Release date:2018-04-25
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Five-Coordinate Platinum(II) Compounds Containing Sugar Ligands: Synthesis, Characterization, Cytotoxic Activity, and Interaction with Biological Macromolecules.
Inorg Chem, 57, 2018
4X9C
DownloadVisualize
BU of 4x9c by Molmil
1.4A crystal structure of Hfq from Methanococcus jannaschii
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Nikulin, A.D, Tishchenko, S.V, Nikonova, S.V, Murina, V.N, Mihailina, A.O, Lekontseva, N.V.
Deposit date:2014-12-11
Release date:2014-12-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii.
J. Biomol. Struct. Dyn., 35, 2017
4X9D
DownloadVisualize
BU of 4x9d by Molmil
High-resolution structure of Hfq from Methanococcus jannaschii in complex with UMP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Nikulin, A.D, Tishchenko, S.V, Nikonova, E.Y, Murina, V.N, Mihailina, A.O, Lekontseva, N.V.
Deposit date:2014-12-11
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii.
J. Biomol. Struct. Dyn., 35, 2017
8BYV
DownloadVisualize
BU of 8byv by Molmil
Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Bikmullin, A.G, Fatkhullin, B, Stetsenko, A, Guskov, A, Yusupov, M.
Deposit date:2022-12-14
Release date:2023-12-27
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Yet Another Similarity between Mitochondrial and Bacterial Ribosomal Small Subunit Biogenesis Obtained by Structural Characterization of RbfA from S. aureus.
Int J Mol Sci, 24, 2023
7O23
DownloadVisualize
BU of 7o23 by Molmil
C-terminal head domain of the trimeric autotransporter adhesin BpaC from Burkholderia pseudomallei fused to a GCN4 anchor
Descriptor: Autotransporter adhesin BpaC,Autotransporter adhesin BpaC,General control transcription factor GCN4, GLYCEROL, SODIUM ION
Authors:Kiessling, A.R, Goldman, A.
Deposit date:2021-03-30
Release date:2022-06-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The C-terminal head domain of Burkholderia pseudomallei BpaC has a striking hydrophilic core with an extensive solvent network.
Mol.Microbiol., 118, 2022
7P8V
DownloadVisualize
BU of 7p8v by Molmil
The structure of E. coli MutL bound to a 3' resected DNA end
Descriptor: DNA mismatch repair protein MutL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Borsellini, A, Lamers, M.H.
Deposit date:2021-07-23
Release date:2022-06-29
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:MutL binds to 3' resected DNA ends and blocks DNA polymerase access.
Nucleic Acids Res., 50, 2022
7NQB
DownloadVisualize
BU of 7nqb by Molmil
X.ray structure of the oxaliplatin/beta-lactoglobulin adduct
Descriptor: Beta-lactoglobulin, PLATINUM (II) ION
Authors:Merlino, A, Loreto, D, Ferraro, G.
Deposit date:2021-03-01
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Protein-Based Delivery Systems for Anticancer Metallodrugs: Structure and Biological Activity of the Oxaliplatin/ beta-Lactoglobulin Adduct.
Pharmaceuticals, 15, 2022
7OR6
DownloadVisualize
BU of 7or6 by Molmil
The crystal structure of the domain-swapped dimer of onconase
Descriptor: Protein P-30
Authors:Merlino, A, Loreto, D.
Deposit date:2021-06-04
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:The crystal structure of the domain-swapped dimer of onconase highlights some catalytic and antitumor activity features of the enzyme.
Int.J.Biol.Macromol., 191, 2021
7ORD
DownloadVisualize
BU of 7ord by Molmil
The crystal structure of the domain-swapped dimer of onconase (2)
Descriptor: ACETATE ION, Protein P-30, SULFATE ION
Authors:Merlino, A, Loreto, D.
Deposit date:2021-06-05
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:The crystal structure of the domain-swapped dimer of onconase highlights some catalytic and antitumor activity features of the enzyme.
Int.J.Biol.Macromol., 191, 2021
8C6C
DownloadVisualize
BU of 8c6c by Molmil
Light SFX structure of D.m(6-4)photolyase at 300ps time delay
Descriptor: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
Authors:Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S.
Deposit date:2023-01-11
Release date:2023-11-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography.
Nat.Chem., 16, 2024
8C6H
DownloadVisualize
BU of 8c6h by Molmil
Light SFX structure of D.m(6-4)photolyase at 2ps time delay
Descriptor: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
Authors:Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S.
Deposit date:2023-01-11
Release date:2023-11-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography.
Nat.Chem., 16, 2024
8C1U
DownloadVisualize
BU of 8c1u by Molmil
SFX structure of D.m(6-4)photolyase
Descriptor: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
Authors:Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S.
Deposit date:2022-12-21
Release date:2023-11-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography.
Nat.Chem., 16, 2024
8C69
DownloadVisualize
BU of 8c69 by Molmil
Light SFX structure of D.m(6-4)photolyase at 100 microsecond time delay
Descriptor: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
Authors:Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S.
Deposit date:2023-01-11
Release date:2023-11-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography.
Nat.Chem., 16, 2024
8C6A
DownloadVisualize
BU of 8c6a by Molmil
Light SFX structure of D.m(6-4)photolyase at 1ps time delay
Descriptor: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
Authors:Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S.
Deposit date:2023-01-11
Release date:2023-11-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography.
Nat.Chem., 16, 2024

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon