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PDB: 12479 件

8T83
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X-ray crystal structure of PfA-M1(M462K)
分子名称: Aminopeptidase N, GLYCEROL, ZINC ION
著者Yang, W, Drinkwater, N, Webb, C.T, McGowan, S.
登録日2023-06-21
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational dynamics of the Plasmodium falciparum M1 aminopeptidase.
To Be Published
8SYG
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Cryo-EM structure of tetradecameric hub domain of CaMKII alpha
分子名称: Venus-tagged CaMKII Alpha Association Domain
著者Chien, C.-T, Chiu, W, Khan, S.
登録日2023-05-25
公開日2024-06-19
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Hub stability in the calcium calmodulin-dependent protein kinase II.
Commun Biol, 7, 2024
8T6K
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Cryo-EM structure of tetradecameric CaMKII beta holoenzyme T287A T306A T307A
分子名称: Venus-tagged CaMKII Beta Holoenzyme mutant
著者Chien, C.-T, Chiu, W, Khan, S.
登録日2023-06-16
公開日2024-06-19
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Hub stability in the calcium calmodulin-dependent protein kinase II.
Commun Biol, 7, 2024
4BAC
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prototype foamy virus strand transfer complexes on product DNA
分子名称: 5'-D(*AP*GP*GP*AP*GP*CP*CP*AP*AP*GP*AP*CP*GP*GP *AP*TP*CP)-3', 5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP *TP*TP*GP*TP*AP)-3', DNA (38-MER), ...
著者Yin, Z, Lapkouski, M, Yang, W, Craigie, R.
登録日2012-09-12
公開日2012-10-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.263 Å)
主引用文献Assembly of Prototype Foamy Virus Strand Transfer Complexes on Product DNA Bypassing Catalysis of Integration.
Protein Sci., 21, 2012
8T6Q
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Cryo-EM structure of dodecameric CaMKII beta holoenzyme T287A T306A T307A
分子名称: Venus-tagged CaMKII beta holoenzyme mutant
著者Chien, C.-T, Chiu, W, Khan, S.
登録日2023-06-16
公開日2024-06-19
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Hub stability in the calcium calmodulin-dependent protein kinase II.
Commun Biol, 7, 2024
4HMP
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Crystal structure of iron uptake ABC transporter substrate-binding protein PiaA from Streptococcus pneumoniae TIGR4
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, GLYCEROL, ...
著者Cheng, W, Li, Q, Jiang, Y.-L, Chen, Y, Zhou, C.-Z.
登録日2012-10-18
公開日2013-09-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structures of Streptococcus pneumoniae PiaA and Its Complex with Ferrichrome Reveal Insights into the Substrate Binding and Release of High Affinity Iron Transporters
Plos One, 8, 2013
4HMV
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Crystal structure of PhzG from Pseudomonas fluorescens 2-79 in complex with tetrahydrophenazine-1-carboxylic acid after 5 days of soaking
分子名称: (1R,10aS)-1,2,10,10a-tetrahydrophenazine-1-carboxylic acid, FLAVIN MONONUCLEOTIDE, Phenazine biosynthesis protein phzG, ...
著者Xu, N.N, Ahuja, E.G, Blankenfeldt, W.
登録日2012-10-18
公開日2013-08-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis
Acta Crystallogr.,Sect.D, 69, 2013
4HMO
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Crystal structure of streptococcus pneumoniae TIGR4 PiaA in complex with Bis-tris propane
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Iron-compound ABC transporter, ...
著者Cheng, W, Li, Q, Jiang, Y.-L, Chen, Y, Zhou, C.-Z.
登録日2012-10-18
公開日2013-09-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of Streptococcus pneumoniae PiaA and Its Complex with Ferrichrome Reveal Insights into the Substrate Binding and Release of High Affinity Iron Transporters
Plos One, 8, 2013
4HMW
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Crystal structure of PhzG from Burkholderia lata 383
分子名称: FLAVIN MONONUCLEOTIDE, Pyridoxamine 5'-phosphate oxidase
著者Xu, N.N, Ahuja, E.G, Blankenfeldt, W.
登録日2012-10-18
公開日2013-08-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis
Acta Crystallogr.,Sect.D, 69, 2013
4HTL
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Lmo2764 protein, a putative N-acetylmannosamine kinase, from Listeria monocytogenes
分子名称: 1,2-ETHANEDIOL, Beta-glucoside kinase
著者Osipiuk, J, Mack, J, Endres, M, Salazar, J, Zhang, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2012-11-01
公開日2012-11-14
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Lmo2764 protein, a putative N-acetylmannosamine kinase, from Listeria monocytogenes.
To be Published
4BCY
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Monomeric Human Cu,Zn Superoxide dismutase, mutation H43F
分子名称: CADMIUM ION, CHLORIDE ION, COPPER (II) ION, ...
著者Awad, W, Saraboji, K, Danielsson, J, Lang, L, Kurnik, M, Marklund, S.L, Oliveberg, M, Logan, D.T.
登録日2012-10-03
公開日2013-02-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.272 Å)
主引用文献Global Structural Motions from the Strain of a Single Hydrogen Bond.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HKQ
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XMRV reverse transcriptase in complex with RNA/DNA hybrid
分子名称: DNA (5'-D(*TP*GP*GP*AP*AP*TP*CP*A*GP*GP*TP*GP*TP*CP*GP*CP*AP*CP*TP*CP*TP*G)-3'), RNA (5'-R(*AP*AP*CP*AP*GP*AP*GP*UP*GP*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*CP*AP*U)-3'), Reverse transcriptase/ribonuclease H p80
著者Nowak, E, Potrzebowski, W, Konarev, P.V, Rausch, J.W, Bona, M.K, Svergun, D.I, Bujnicki, J.M, Le Grice, S.F.J, Nowotny, M.
登録日2012-10-15
公開日2013-02-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structural analysis of monomeric retroviral reverse transcriptase in complex with an RNA/DNA hybrid
Nucleic Acids Res., 41, 2013
4DY0
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Crystal structure of native protease nexin-1 with heparin
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, GLYCEROL, Glia-derived nexin, ...
著者Huntington, J.A, Li, W.
登録日2012-02-28
公開日2012-08-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structures of protease nexin-1 in complex with heparin and thrombin suggest a 2-step recognition mechanism.
Blood, 120, 2012
4HMT
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Crystal structure of PhzG from Pseudomonas fluorescens 2-79 in complex with hexahydrophenazine-1,6-dicarboxylic acid
分子名称: (1R,5aS,6R)-1,2,5,5a,6,7-hexahydrophenazine-1,6-dicarboxylic acid, FLAVIN MONONUCLEOTIDE, Phenazine biosynthesis protein phzG, ...
著者Xu, N.N, Ahuja, E.G, Blankenfeldt, W.
登録日2012-10-18
公開日2013-08-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis
Acta Crystallogr.,Sect.D, 69, 2013
4DFJ
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Crystal structure of the large fragment of DNA Polymerase I from Thermus aquaticus in a closed ternary complex with 5-(aminopentinyl)-dTTP
分子名称: 1,2-ETHANEDIOL, 5'-d(AAAAGGCGCCGTGGTC)-3', 5'-d(GACCACGGCGC DOC)-3', ...
著者Bergen, K, Steck, A, Struett, S, Baccaro, A, Welte, W, Diederichs, K, Marx, A.
登録日2012-01-23
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of KlenTaq DNA Polymerase Caught While Incorporating C5-Modified Pyrimidine and C7-Modified 7-Deazapurine Nucleoside Triphosphates.
J.Am.Chem.Soc., 134, 2012
8TWI
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BU of 8twi by Molmil
Cryo-EM structure of the PP2A:B55-FAM122A complex, PP2Ac body
分子名称: FE (III) ION, PPP2R1A-PPP2R2A-interacting phosphatase regulator 1, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
著者Fuller, J.R, Padi, S.K.R, Peti, W, Page, R.
登録日2023-08-21
公開日2023-11-01
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (2.69 Å)
主引用文献Cryo-EM structures of PP2A:B55-FAM122A and PP2A:B55-ARPP19.
Nature, 625, 2024
8U45
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Crystal Structure Analysis of Aspergillus fumigatus alkaline protease
分子名称: Alkaline protease 1, CALCIUM ION, CHLORIDE ION, ...
著者Fernandez, D, Diec, D.D.L, Guo, W, Russi, S.
登録日2023-09-08
公開日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Targeting Aspergillus allergen oryzin with a chemical probe at atomic precision.
Sci Rep, 13, 2023
8TWE
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Cryo-EM structure of the PP2A:B55-FAM122A complex, B55 body
分子名称: PPP2R1A-PPP2R2A-interacting phosphatase regulator 1, Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
著者Fuller, J.R, Padi, S.K.R, Peti, W, Page, R.
登録日2023-08-21
公開日2023-11-01
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Cryo-EM structures of PP2A:B55-FAM122A and PP2A:B55-ARPP19.
Nature, 625, 2024
8TTB
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Cryo-EM structure of the PP2A:B55-ARPP19 complex
分子名称: FE (III) ION, Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
著者Fuller, J.R, Padi, S.K.R, Peti, W, Page, R.
登録日2023-08-13
公開日2023-10-25
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Cryo-EM structures of PP2A:B55-FAM122A and PP2A:B55-ARPP19.
Nature, 625, 2024
4HP1
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Crystal structure of Tet3 in complex with a non-CpG dsDNA
分子名称: DNA (5'-D(*GP*CP*CP*AP*CP*(5CM)P*GP*GP*TP*GP*GP*C)-3'), LOC100036628 protein, ZINC ION
著者Chao, X, Tempel, W, Bian, C, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2012-10-23
公開日2012-12-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Tet3 CXXC Domain and Dioxygenase Activity Cooperatively Regulate Key Genes for Xenopus Eye and Neural Development.
Cell(Cambridge,Mass.), 151, 2012
4HPW
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Crystal structure of Tyrosine-tRNA ligase mutant complexed with unnatural amino acid 3-o-methyl-Tyrosine
分子名称: 3-methoxy-L-tyrosine, Tyrosine--tRNA ligase
著者Yu, Y, Zhou, Q, Dong, J, Li, J, Xiaoxuan, L, Mukherjee, A, Ouyang, H, Nilges, M, Li, H, Gao, F, Gong, W, Lu, Y, Wang, J.
登録日2012-10-24
公開日2013-10-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Crystal structure of Tyrosine-tRNA ligase mutant complexed with unnatural amino acid 3-o-methyl-Tyrosine
To be Published
4DJH
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Structure of the human kappa opioid receptor in complex with JDTic
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (3R)-7-hydroxy-N-{(2S)-1-[(3R,4R)-4-(3-hydroxyphenyl)-3,4-dimethylpiperidin-1-yl]-3-methylbutan-2-yl}-1,2,3,4-tetrahydroisoquinoline-3-carboxamide, CITRIC ACID, ...
著者Wu, H, Wacker, D, Katritch, V, Mileni, M, Han, G.W, Vardy, E, Liu, W, Thompson, A.A, Huang, X.P, Carroll, F.I, Mascarella, S.W, Westkaemper, R.B, Mosier, P.D, Roth, B.L, Cherezov, V, Stevens, R.C, GPCR Network (GPCR)
登録日2012-02-01
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献tructure of the human kappa-opioid receptor in complex with JDTic
Nature, 485, 2012
4DM6
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Crystal structure of RARb LBD homodimer in complex with TTNPB
分子名称: 4-[(1E)-2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)PROP-1-ENYL]BENZOIC ACID, Nuclear receptor coactivator 1, Retinoic acid receptor beta
著者Osz, J, Brelivet, Y, Peluso-Iltis, C, Cura, V, Eiler, S, Ruff, M, Bourguet, W, Rochel, N, Moras, D.
登録日2012-02-07
公開日2012-03-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for a molecular allosteric control mechanism of cofactor binding to nuclear receptors.
Proc.Natl.Acad.Sci.USA, 109, 2012
4HX0
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Crystal structure of a putative nucleotidyltransferase (TM1012) from Thermotoga maritima at 1.87 A resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,4-BUTANEDIOL, Putative nucleotidyltransferase TM1012, ...
著者Boyko, K.M, Gorbacheva, M.A, Korzhenevskiy, D.A, Lipkin, A.V, Popov, V.O, Kovalchuk, M.V, Shumilin, I.A, Minor, W, Shabalin, I.G, Golubev, A.M.
登録日2012-11-09
公開日2013-09-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of putative nucleotidyltransferase with two MPD molecules in the active site.
To be Published
4DFK
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large fragment of DNA Polymerase I from Thermus aquaticus in a closed ternary complex with 5-(N-(10-hydroxydecanoyl)-aminopentinyl)-2-dUTP
分子名称: 1,2-ETHANEDIOL, 2'-deoxy-5-{5-[(10-hydroxydecanoyl)amino]pent-1-yn-1-yl}uridine 5'-(tetrahydrogen triphosphate), 5'-d(AAAAGGCGCCGTGGTC)-3', ...
著者Bergen, K, Steck, A, Struett, S, Baccaro, A, Welte, W, Diederichs, K, Marx, A.
登録日2012-01-24
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.647 Å)
主引用文献Structures of KlenTaq DNA Polymerase Caught While Incorporating C5-Modified Pyrimidine and C7-Modified 7-Deazapurine Nucleoside Triphosphates.
J.Am.Chem.Soc., 134, 2012

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件を2024-07-10に公開中

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