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PDB: 12479 件

6K4U
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Crystal structure of xCas9 in complex with sgRNA and DNA (TGA PAM)
分子名称: CRISPR-associated endonuclease Cas9, non-target DNA, sgRNA, ...
著者Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
登録日2019-05-27
公開日2019-09-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
6K63
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The crystal structure of cytidine deaminase from Klebsiella pneumoniae
分子名称: 1,4-DIETHYLENE DIOXIDE, Cytidine deaminase, ZINC ION
著者Liu, W, Shang, F, Lan, J, Chen, Y, Wang, L, Xu, Y.
登録日2019-06-01
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.073 Å)
主引用文献Biochemical and structural analysis of the Klebsiella pneumoniae cytidine deaminase CDA.
Biochem.Biophys.Res.Commun., 519, 2019
6K04
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Crystal structure of BRD2(BD2)with ligand BY27 bound
分子名称: (6~{R})-~{N}-(4-chlorophenyl)-1-methyl-8-(1-methylpyrazol-4-yl)-5,6-dihydro-4~{H}-[1,2,4]triazolo[4,3-a][1]benzazepin-6-amine, Bromodomain-containing protein 2
著者Lu, T, Lu, W, Chen, D, Zhao, Y, Luo, C.
登録日2019-05-05
公開日2019-09-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.251 Å)
主引用文献Discovery, structural insight, and bioactivities of BY27 as a selective inhibitor of the second bromodomains of BET proteins.
Eur.J.Med.Chem., 182, 2019
6K2H
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BU of 6k2h by Molmil
structural characterization of mutated NreA protein in nitrate binding site from staphylococcus aureus.
分子名称: 1,2-ETHANEDIOL, NreA
著者Sangare, L, Chen, W, Wang, C, Chen, X, Wu, M, Zhang, X, Zang, J.
登録日2019-05-14
公開日2020-03-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the conformational change of Staphylococcus aureus NreA at C-terminus.
Biotechnol.Lett., 42, 2020
6KC7
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Crystal structure of Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in seed-base paring state
分子名称: CRISPR-associated endonuclease Cas9, DNA (5'-D(*AP*TP*AP*TP*GP*AP*TP*TP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*AP*AP*TP*CP*AP*TP*AP*TP*GP*TP*AP*AP*AP*GP*TP*T)-3'), ...
著者Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
登録日2019-06-27
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
6K6K
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The crystal structure of light-driven cyanobacterial chloride importer (N63A/P118A) Mastigocladopsis repens
分子名称: CHLORIDE ION, Cyanobacterial chloride importer, OLEIC ACID, ...
著者Yun, J.H, Park, J.H, Jin, Z, Ohki, M, Wang, Y, Lupala, C.S, Kim, M, Liu, H, Park, S.Y, Lee, W.
登録日2019-06-03
公開日2020-06-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献The crystal structure of light-driven cyanobacterial chloride importer (N63A/P118A) Mastigocladopsis repens
To Be Published
6K98
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Substrates promiscuity of xyloglucanases and endoglucanases of glycoside hydrolase 12 family
分子名称: GH12 beta-1, 4-endoglucanase
著者Hong, Y, Tao, T, Pengjun, S, Jiaming, C, Xiaoyu, W, Chen, H, yingguo, B, Bin, Y.
登録日2019-06-14
公開日2020-06-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.032 Å)
主引用文献Substrates promiscuity of xyloglucanases and endoglucanases of glycoside hydrolase 12 family
To Be Published
6K9D
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glycoside hydrolase family 12 (GH12) englucanase
分子名称: GH12 beta-1, 4-endoglucanase
著者Hong, Y, Tao, T, Pengjun, S, Jiaming, C, Xiaoyu, W, Chen, H, Yingguo, B, Bin, Y.
登録日2019-06-14
公開日2020-06-17
実験手法X-RAY DIFFRACTION (1.505 Å)
主引用文献Substrates promiscuity of xyloglucanases and endoglucanases of glycoside hydrolase 12 family
To Be Published
6KC8
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Crystal structure of WT Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in post-cleavage state
分子名称: CRISPR-associated endonuclease Cas9, DNA (5'-D(*AP*TP*AP*TP*GP*AP*TP*TP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*AP*AP*TP*CP*AP*TP*AP*TP*GP*TP*A)-3'), ...
著者Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
登録日2019-06-27
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
6JZA
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Structure of Fstl1
分子名称: Follistatin-related protein 1
著者Liu, X, Ning, W.
登録日2019-04-30
公開日2019-08-21
最終更新日2019-09-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and functional study of FK domain of Fstl1.
Protein Sci., 28, 2019
6KJH
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BU of 6kjh by Molmil
Functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors
分子名称: Putative beta-lactamase, SULFATE ION
著者Xiao, F, Sheng, D, Feng, Y, Li, W.
登録日2019-07-22
公開日2020-07-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural Basis of Specificity for Carboxyl-Terminated Acyl Donors in a Bacterial Acyltransferase.
J.Am.Chem.Soc., 142, 2020
6KJQ
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BU of 6kjq by Molmil
Functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors
分子名称: (3~{Z},5~{E},8~{S},9~{E},11~{E},14~{S},16~{R},17~{Z},19~{E},24~{R})-24-methyl-8,14,16-tris(oxidanyl)-1-oxacyclotetracosa-3,5,9,11,17,19-hexaen-2-one, Putative beta-lactamase
著者Xiao, F, Dong, S, Feng, Y, Li, W.
登録日2019-07-23
公開日2020-07-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural Basis of Specificity for Carboxyl-Terminated Acyl Donors in a Bacterial Acyltransferase.
J.Am.Chem.Soc., 142, 2020
6K2Q
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Aeromonas hydrophila MtaN-2 complexed with adenine
分子名称: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, ADENINE
著者Chen, J, Liu, W, Wang, L, Shang, F, Lan, J, Chen, Y, Xu, Y.
登録日2019-05-15
公開日2019-05-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Aeromonas hydrophila Cytoplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase.
Biochemistry, 58, 2019
6K0N
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BU of 6k0n by Molmil
Catalytic domain of GH87 alpha-1,3-glucanase in complex with nigerose
分子名称: ACETIC ACID, Alpha-1,3-glucanase, CALCIUM ION, ...
著者Itoh, T, Intuy, R, Suyotha, W, Hayashi, J, Yano, S, Makabe, K, Wakayama, M, Hibi, T.
登録日2019-05-07
公開日2019-12-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insights into substrate recognition and catalysis by glycoside hydrolase family 87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11.
Febs J., 287, 2020
6K35
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Crystal structure of GH20 exo beta-N-acetylglucosaminidase from Vibrio harveyi in complex with NAG-thiazoline
分子名称: 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, Beta-N-acetylglucosaminidase Nag2
著者Meekrathok, P, Stubbs, K.A, Bulmer, D.M, van den Berg, B, Suginta, W.
登録日2019-05-16
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献NAG-thiazoline is a potent inhibitor of the Vibrio campbellii GH20 beta-N-Acetylglucosaminidase.
Febs J., 287, 2020
6K4S
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BU of 6k4s by Molmil
Crystal structure of xCas9 in complex with sgRNA and DNA (TGC PAM)
分子名称: CRISPR-associated endonuclease Cas9/Csn1, non-targeted DNA, sgRNA, ...
著者Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
登録日2019-05-26
公開日2019-09-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
6K7W
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BU of 6k7w by Molmil
Solution Structure of the CS1 Domain of USP19
分子名称: Ubiquitin carboxyl-terminal hydrolase 19
著者Xue, W, Hu, H.Y.
登録日2019-06-10
公開日2020-06-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Domain interactions reveal auto-inhibition of the deubiquitinating enzyme USP19 and its activation by HSP90 in the modulation of huntingtin aggregation.
Biochem.J., 477, 2020
6JTC
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BU of 6jtc by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) with SH-5 from Porphyromonas gingivalis (Space)
分子名称: 2-(2-azanylethylamino)-5-nitro-benzoic acid, Asp/Glu-specific dipeptidyl-peptidase, GLYCEROL
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Roppongi, S, Kushibiki, C, Nakamura, A, Ogasawara, W, Tanaka, N.
登録日2019-04-10
公開日2019-10-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Fragment-based discovery of the first nonpeptidyl inhibitor of an S46 family peptidase.
Sci Rep, 9, 2019
6K0P
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Catalytic domain of GH87 alpha-1,3-glucanase D1045A in complex with nigerose
分子名称: ACETIC ACID, Alpha-1,3-glucanase, CALCIUM ION, ...
著者Itoh, T, Intuy, R, Suyotha, W, Hayashi, J, Yano, S, Makabe, K, Wakayama, M, Hibi, T.
登録日2019-05-07
公開日2019-12-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.424 Å)
主引用文献Structural insights into substrate recognition and catalysis by glycoside hydrolase family 87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11.
Febs J., 287, 2020
6KBP
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Crystal structure of human D-amino acid oxidase mutant (P219L) complexed with benzoate
分子名称: ACETATE ION, BENZOIC ACID, D-amino-acid oxidase, ...
著者Rachadech, W, Kato, Y, Maita, N, Fukui, K.
登録日2019-06-26
公開日2020-07-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of human D-amino acid oxidase mutant (P219L) complexed with benzoate
To Be Published
6KG7
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Cryo-EM Structure of the Mammalian Tactile Channel Piezo2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Piezo-type mechanosensitive ion channel component 2
著者Wang, L, Zhou, H, Zhang, M, Liu, W, Deng, T, Zhao, Q, Li, Y, Lei, J, Li, X, Xiao, B.
登録日2019-07-11
公開日2019-09-04
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure and mechanogating of the mammalian tactile channel PIEZO2.
Nature, 573, 2019
6KJT
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Functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors
分子名称: Putative beta-lactamase, SUCCINIC ACID
著者Xiao, F, Dong, S, Feng, Y, Li, W.
登録日2019-07-23
公開日2020-07-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.113 Å)
主引用文献Structural Basis of Specificity for Carboxyl-Terminated Acyl Donors in a Bacterial Acyltransferase.
J.Am.Chem.Soc., 142, 2020
6K1Q
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Human endothelin receptor type-B in complex with inverse agonist IRL2500
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2~{S})-2-[[(2~{R})-2-[(3,5-dimethylphenyl)carbonyl-methyl-amino]-3-(4-phenylphenyl)propanoyl]amino]-3-(1~{H}-indol-3-yl)propanoic acid, Endothelin B receptor,Endolysin,Endothelin B receptor, ...
著者Nagiri, C, Shihoya, W, Nureki, O.
登録日2019-05-11
公開日2019-07-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of human endothelin ETBreceptor in complex with peptide inverse agonist IRL2500.
Commun Biol, 2, 2019
6K6J
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The crystal structure of light-driven cyanobacterial chloride importer from Mastigocladopsis repens with Bromide ion
分子名称: BROMIDE ION, Cyanobacterial chloride importer, OLEIC ACID, ...
著者Yun, J.H, Park, J.H, Jin, Z, Ohki, M, Wang, Y, Lupala, C.S, Kim, M, Liu, H, Park, S.Y, Lee, W.
登録日2019-06-03
公開日2020-06-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of light-driven cyanobacterial chloride importer from Mastigocladopsis repens with Bromide ion
To Be Published
2D55
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Structural, physical and biological characteristics of RNA.DNA binding agent N8-actinomycin D
分子名称: ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
著者Shinomiya, M, Chu, W, Carlson, R.G, Weaver, R.F, Takusagawa, F.
登録日1995-05-01
公開日1995-10-15
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of the 2:1 Complex between D(Gaagcttc) and the Anticancer Drug Actinomycin D.
J.Mol.Biol., 225, 1992

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