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PDB: 12479 件

1N4O
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Crystal structure of the Class A beta-lactamase L2 from Stenotrophomonas maltophilia
分子名称: L2 beta-lactamase, SULFATE ION
著者Pernot, L, Petrella, S, Sougakoff, W.
登録日2002-11-01
公開日2003-11-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Role of the disulfide bridge Cys69-Cys238 in class A b-lactamases : a structural and biochemical investigation on the b-lactamase L2 from Stenotrophomonas maltophilia
To be Published
3KHE
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BU of 3khe by Molmil
Crystal structure of the calcium-loaded calmodulin-like domain of the CDPK, 541.m00134 from toxoplasma gondii
分子名称: CALCIUM ION, Calmodulin-like domain protein kinase isoform 3, GLYCEROL, ...
著者Wernimont, A.K, Hutchinson, A, Artz, J.D, Mackenzie, F, Cossar, D, Kozieradzki, I, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Hui, R, Qiu, W, Amani, M, Structural Genomics Consortium (SGC)
登録日2009-10-30
公開日2010-01-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structures of parasitic CDPK domains point to a common mechanism of activation.
Proteins, 79, 2011
7VVE
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Complex structure of a leaf-branch compost cutinase variant in complex with mono(2-hydroxyethyl) terephthalic acid
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 4-(2-hydroxyethyloxycarbonyl)benzoic acid, CALCIUM ION, ...
著者Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
登録日2021-11-05
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
3KZP
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Crystal structure of putative diguanylate cyclase/phosphodiesterase from Listaria monocytigenes
分子名称: CACODYLATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Klimecka, M.M, Chruszcz, M, Zimmerman, M.D, Kudritska, M, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2009-12-08
公開日2009-12-22
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of putative diguanylate cyclase/phosphodiesterase from Listaria monocytigenes
To be Published
2GLL
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Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase(FabZ) from Helicobacter pylori
分子名称: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase, BENZAMIDINE, CHLORIDE ION
著者Zhang, L, Liu, W, Shen, X, Jiang, H.
登録日2006-04-05
公開日2007-03-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for catalytic and inhibitory mechanisms of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ).
J.Biol.Chem., 283, 2008
3F5L
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Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase, SULFATE ION, ...
著者Chuenchor, W, Ketudat Cairns, J.R, Pengthaisong, S, Robinson, R.C, Yuvaniyama, J, Chen, C.-J.
登録日2008-11-04
公開日2009-11-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献The structural basis of oligosaccharide binding by rice BGlu1 beta-glucosidase
J.Struct.Biol., 173, 2011
7YBN
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SARS-CoV-2 C.1.2 variant spike (Open state)
分子名称: Spike glycoprotein
著者Wang, X, Fu, W.
登録日2022-06-29
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (3.82 Å)
主引用文献SARS-CoV-2 lambda variant spike
To Be Published
3KP9
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Structure of a bacterial homolog of vitamin K epoxide reductase
分子名称: MERCURY (II) ION, UBIQUINONE-10, VKORC1/thioredoxin domain protein
著者Li, W, Schulman, S, Dutton, R.J, Boyd, D, Beckwith, J, Rapoport, T.A.
登録日2009-11-16
公開日2010-02-09
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure of a bacterial homologue of vitamin K epoxide reductase.
Nature, 463, 2010
1N67
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Clumping Factor A from Staphylococcus aureus
分子名称: Clumping Factor, MAGNESIUM ION
著者Deivanayagam, C.C.S, Wann, E.R, Chen, W, Carson, M, Rajashankar, K.R, Hook, M, Narayana, S.V.L.
登録日2002-11-08
公開日2003-03-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A novel variant of the immunoglobulin fold in surface adhesins of Staphylococcus aureus: crystal structure of the fibrinogen-binding MSCRAMM, clumping factor A
Embo J., 21, 2002
2GPM
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Crystal structure of an RNA racemate
分子名称: CALCIUM ION, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3')
著者Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
登録日2006-04-18
公開日2006-06-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
7VVC
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Crystal structure of inactive mutant of leaf-branch compost cutinase variant
分子名称: ACETATE ION, ACETIC ACID, CALCIUM ION, ...
著者Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
登録日2021-11-05
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
3FK6
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BU of 3fk6 by Molmil
Crystal structure of TetR triple mutant (H64K, S135L, S138I)
分子名称: Tetracycline repressor protein class B from transposon Tn10, Tetracycline repressor protein class D
著者Klieber, M.A, Scholz, O, Lochner, S, Gmeiner, P, Hillen, W, Muller, Y.A.
登録日2008-12-16
公開日2009-10-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural origins for selectivity and specificity in an engineered bacterial repressor-inducer pair.
Febs J., 276, 2009
3KH0
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Crystal structure of the Ras-association (RA) domain of RALGDS
分子名称: Ral guanine nucleotide dissociation stimulator, UNKNOWN ATOM OR ION
著者Shen, Y, Tempel, W, Wang, H, Tong, Y, Guan, X, Crombet, L, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2009-10-29
公開日2009-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the Ras-association (RA) domain of RALGDS
to be published
1N6G
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BU of 1n6g by Molmil
The structure of immature Dengue-2 prM particles
分子名称: major envelope protein E
著者Zhang, Y, Corver, J, Chipman, P.R, Zhang, W, Pletnev, S.V, Sedlak, D, Baker, T.S, Strauss, J.H, Kuhn, R.J, Rossmann, M.G.
登録日2002-11-10
公開日2003-06-03
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献Structures of Immature flavivirus particles
EMBO J., 22, 2003
3KE8
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BU of 3ke8 by Molmil
Crystal structure of IspH:HMBPP-complex
分子名称: 4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
著者Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
登録日2009-10-24
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
2H01
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BU of 2h01 by Molmil
PY00414- Plasmodium yoelii thioredoxin peroxidase I
分子名称: 2-CYS PEROXIREDOXIN
著者Artz, J, Qiu, W, Min, J.R, Dong, A, Lew, J, Melone, M, Alam, Z, Weigelt, J, Sundstrom, M, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
登録日2006-05-12
公開日2006-05-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of PY00414 - a Plasmodium yoelii thioredoxin peroxidase I
To be Published
2GTA
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Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.
分子名称: Hypothetical protein ypjD, SODIUM ION
著者Vorobiev, S.M, Zhou, W, Seetharaman, J, Wang, D, Ma, L.C, Acton, T, Xio, R, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2006-04-27
公開日2006-05-23
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis.
To be Published
8ABL
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Complex III2 from Yarrowia lipolytica, with decylubiquinol and antimycin A, consensus refinement
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
著者Wieferig, J.P, Kuhlbrandt, W.
登録日2022-07-04
公開日2023-01-11
最終更新日2023-01-25
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8ABG
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Complex III2 from Yarrowia lipolytica, oxidised with ferricyanide, c-position
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
著者Wieferig, J.P, Kuhlbrandt, W.
登録日2022-07-04
公開日2023-01-11
最終更新日2023-01-25
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
2GV7
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Structure of Matriptase in Complex with Inhibitor CJ-672
分子名称: (S)-4-(4-(3-(3-CARBAMIMIDOYLPHENYL)-2-(2,4,6-TRIISOPROPYLPHENYLSULFONAMIDO)PROPANOYL)PIPERAZINE-1-CARBONYL)PIPERIDINE-1-CARBOXIMIDAMIDE, Suppressor of tumorigenicity 14
著者Bode, W.
登録日2006-05-02
公開日2006-06-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Secondary Amides of Sulfonylated 3-Amidinophenylalanine. New Potent and Selective Inhibitors of Matriptase.
J.Med.Chem., 49, 2006
1MWQ
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Structure of HI0828, a Hypothetical Protein from Haemophilus influenzae with a Putative Active-Site Phosphohistidine
分子名称: CACODYLATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Willis, M.A, Krajewski, W, Chalamasetty, V.R, Reddy, P, Howard, A, Herzberg, O, Structure 2 Function Project (S2F)
登録日2002-09-30
公開日2003-11-25
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Structure of YciI from Haemophilus influenzae (HI0828) reveals a ferredoxin-like alpha/beta-fold with a histidine/aspartate centered catalytic site
Proteins, 59, 2005
2H2S
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BU of 2h2s by Molmil
Crystal Structure of E148A mutant of CLC-ec1 in SeCN-
分子名称: CLC Cl transporter, FAB fragment, heavy chain, ...
著者Nguitragool, W, Miller, C.
登録日2006-05-19
公開日2006-05-30
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Uncoupling of a CLC Cl(-)/H(+) Exchange Transporter by Polyatomic Anions
J.Mol.Biol., 362, 2006
3K19
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OmpF porin
分子名称: Outer membrane protein F
著者Kefala, G, Ahn, C, Krupa, M, Maslennikov, I, Kwiatkowski, W, Choe, S, Center for Structures of Membrane Proteins (CSMP)
登録日2009-09-26
公開日2010-04-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.79 Å)
主引用文献Structures of the OmpF porin crystallized in the presence of foscholine-12.
Protein Sci., 19, 2010
2H67
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NMR structure of human insulin mutant HIS-B5-ALA, HIS-B10-ASP PRO-B28-LYS, LYS-B29-PRO, 20 structures
分子名称: Insulin A chain, Insulin B chain
著者Hua, Q.X, Liu, M, Hu, S.Q, Jia, W, Arvan, P, Weiss, M.A.
登録日2006-05-30
公開日2006-07-18
最終更新日2021-10-20
実験手法SOLUTION NMR
主引用文献A Conserved Histidine in Insulin Is Required for the Foldability of Human Proinsulin: Structure and function of an Alab5 analog.
J.Biol.Chem., 281, 2006
3JAE
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Structure of alpha-1 glycine receptor by single particle electron cryo-microscopy, glycine-bound state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycine receptor subunit alphaZ1
著者Du, J, Lu, W, Wu, S.P, Cheng, Y.F, Gouaux, E.
登録日2015-06-08
公開日2015-09-09
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Glycine receptor mechanism elucidated by electron cryo-microscopy.
Nature, 526, 2015

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