Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 34568 件

5BMG
DownloadVisualize
BU of 5bmg by Molmil
Nitroxide Spin Labels in Protein GB1: E15 Mutant
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Immunoglobulin G-binding protein G, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
著者Cunningham, T.C, Horne, W.S, Saxena, S.
登録日2015-05-22
公開日2016-04-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Rotameric preferences of a protein spin label at edge-strand beta-sheet sites.
Protein Sci., 25, 2016
3DMK
DownloadVisualize
BU of 3dmk by Molmil
Crystal structure of Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, ...
著者Sawaya, M.R, Wojtowicz, W.M, Eisenberg, D, Zipursky, S.L.
登録日2008-07-01
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (4.19 Å)
主引用文献A double S shape provides the structural basis for the extraordinary binding specificity of Dscam isoforms.
Cell(Cambridge,Mass.), 134, 2008
5GAI
DownloadVisualize
BU of 5gai by Molmil
Probabilistic Structural Models of Mature P22 Bacteriophage Portal, Hub, and Tailspike proteins
分子名称: Peptidoglycan hydrolase gp4, Portal protein, Tail fiber protein
著者Pintilie, G, Chen, D.H, Haase-Pettingell, C.A, King, J.A, Chiu, W.
登録日2015-12-01
公開日2016-02-17
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (10.5 Å)
主引用文献Resolution and Probabilistic Models of Components in CryoEM Maps of Mature P22 Bacteriophage.
Biophys.J., 110, 2016
1ZID
DownloadVisualize
BU of 1zid by Molmil
LONG FATTY ACID CHAIN ENOYL-ACP REDUCTASE (INHA) IN COMPLEX WITH AN ISONICOTINIC-ACYL-NADH INHIBITOR
分子名称: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, ISONICOTINIC-ACETYL-NICOTINAMIDE-ADENINE DINUCLEOTIDE
著者Rozwarski, D.A, Jacobs Jr, W.R, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日1997-03-25
公開日1998-03-25
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Modification of the NADH of the isoniazid target (InhA) from Mycobacterium tuberculosis.
Science, 279, 1998
5GTP
DownloadVisualize
BU of 5gtp by Molmil
The agonist-free structure of human PPARgamma ligand binding domain in the presence of the SRC-1 coactivator peptide
分子名称: GLYCEROL, MYRISTIC ACID, Nuclear receptor coactivator 1, ...
著者Jang, J.Y, Suh, S.W.
登録日2016-08-23
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site.
Biochim. Biophys. Acta, 1865, 2017
5ZHZ
DownloadVisualize
BU of 5zhz by Molmil
Crystal structure of the apurinic/apyrimidinic endonuclease IV from Mycobacterium tuberculosis
分子名称: Probable endonuclease 4, SULFATE ION, ZINC ION
著者Zhang, W, Xu, Y, Yan, M, Li, S, Wang, H, Yang, H, Zhou, W, Rao, Z.
登録日2018-03-13
公開日2018-04-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Crystal structure of the apurinic/apyrimidinic endonuclease IV from Mycobacterium tuberculosis.
Biochem. Biophys. Res. Commun., 498, 2018
3OFT
DownloadVisualize
BU of 3oft by Molmil
Crystal Structure of Cytochrome P450 CYP101C1
分子名称: (2R,5R)-hexane-2,5-diol, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Zhou, W, Ma, M, Bell, S.G, Yang, W, Hao, Y, Rees, N.H, Bartlam, M, Wong, L.-L, Rao, Z.
登録日2010-08-16
公開日2011-07-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Analysis of CYP101C1 from Novosphingobium aromaticivorans DSM12444.
Chembiochem, 12, 2011
1L89
DownloadVisualize
BU of 1l89 by Molmil
SIMILAR HYDROPHOBIC REPLACEMENTS OF LEU 99 AND PHE 153 WITHIN THE CORE OF T4 LYSOZYME HAVE DIFFERENT STRUCTURAL AND THERMODYNAMIC CONSEQUENCES
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME
著者Eriksson, A.E, Matthews, B.W.
登録日1992-01-21
公開日1993-10-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Similar hydrophobic replacements of Leu99 and Phe153 within the core of T4 lysozyme have different structural and thermodynamic consequences.
J.Mol.Biol., 229, 1993
4RXZ
DownloadVisualize
BU of 4rxz by Molmil
Crystal Structure of MDMX phosporylated Tyr99 in complex with a 12-mer peptide
分子名称: 12-MER PEPTIDE INHIBITOR, Protein Mdm4
著者Pazgier, M, Gohain, N, Tolbert, W.D.
登録日2014-12-12
公開日2015-07-22
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis of how stress-induced MDMX phosphorylation activates p53.
Oncogene, 35, 2016
8K6Z
DownloadVisualize
BU of 8k6z by Molmil
NMR structure of human leptin
分子名称: Leptin
著者Fan, X, Qin, R, Yuan, W, Fan, J, Huang, W, Lin, Z.
登録日2023-07-26
公開日2024-02-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The solution structure of human leptin reveals a conformational plasticity important for receptor recognition.
Structure, 32, 2024
2AI6
DownloadVisualize
BU of 2ai6 by Molmil
Solution structure of human phosphohistidine phosphatase 1
分子名称: 14 kDa phosphohistidine phosphatase
著者Gong, W, Cui, G, Jin, C, Xia, B.
登録日2005-07-29
公開日2006-10-17
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure and catalytic mechanism of human protein histidine phosphatase 1.
Biochem.J., 418, 2009
3TU8
DownloadVisualize
BU of 3tu8 by Molmil
Crystal Structure of the Burkholderia Lethal Factor 1 (BLF1)
分子名称: BROMIDE ION, Burkholderia Lethal Factor 1 (BLF1)
著者Cruz, A, Hautbergue, G.M, Artymiuk, P.J, Baker, P.J, Chang, C.T, Mahadi, N.M, Mobbs, G.W, Mohamed, R, Nathan, S, Partridge, L.J, Raih, M.F, Ruzheinikov, S.N, Sedelnikova, S.E, Wilson, S.A, Rice, D.W.
登録日2011-09-16
公開日2011-11-30
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献A Burkholderia pseudomallei toxin inhibits helicase activity of translation factor eIF4A.
Science, 334, 2011
5DAJ
DownloadVisualize
BU of 5daj by Molmil
Crystal structure of NalD, the secondary repressor of MexAB-OprM multidrug efflux pump in Pseudomonas aeruginosa
分子名称: NalD
著者Chen, W.Z, Wang, D, Huang, S.Q, Hu, Q.Y, Liu, X.C, Gan, J.H, Chen, H.
登録日2015-08-20
公開日2016-04-20
最終更新日2023-04-12
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Novobiocin binding to NalD induces the expression of the MexAB-OprM pump in Pseudomonas aeruginosa
Mol.Microbiol., 100, 2016
4RM4
DownloadVisualize
BU of 4rm4 by Molmil
The crystal structure of the versatile cytochrome P450 enzyme CYP109B1 from Bacillus subtilis
分子名称: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Zhouw, W.H, Zhang, A.L, Zhang, T, Hall, E.A, Hutchinson, S, Cryle, M.J, Wong, L.-L, Bell, S.G.
登録日2014-10-18
公開日2015-02-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.771 Å)
主引用文献The crystal structure of the versatile cytochrome P450 enzyme CYP109B1 from Bacillus subtilis.
Mol Biosyst, 11, 2015
4NTJ
DownloadVisualize
BU of 4ntj by Molmil
Structure of the human P2Y12 receptor in complex with an antithrombotic drug
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHOLESTEROL, P2Y purinoceptor 12,Soluble cytochrome b562,P2Y purinoceptor 12, ...
著者Zhang, K, Zhang, J, Gao, Z.-G, Zhang, D, Zhu, L, Han, G.W, Moss, S.M, Paoletta, S, Kiselev, E, Lu, W, Fenalti, G, Zhang, W, Muller, C.E, Yang, H, Jiang, H, Cherezov, V, Katritch, V, Jacobson, K.A, Stevens, R.C, Wu, B, Zhao, Q, GPCR Network (GPCR)
登録日2013-12-02
公開日2014-03-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structure of the human P2Y12 receptor in complex with an antithrombotic drug
Nature, 509, 2014
2ARK
DownloadVisualize
BU of 2ark by Molmil
Structure of a flavodoxin from Aquifex aeolicus
分子名称: Flavodoxin, GLYCEROL, PHOSPHATE ION
著者Cuff, M.E, Quartey, P, Zhou, M, Cymborowski, M, Minor, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2005-08-19
公開日2005-10-25
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of a flavodoxin from Aquifex aeolicus
To be Published
5CSM
DownloadVisualize
BU of 5csm by Molmil
YEAST CHORISMATE MUTASE, T226S MUTANT, COMPLEX WITH TRP
分子名称: CHORISMATE MUTASE, TRYPTOPHAN
著者Straeter, N, Schnappauf, G, Braus, G, Lipscomb, W.N.
登録日1997-07-14
公開日1998-01-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanisms of catalysis and allosteric regulation of yeast chorismate mutase from crystal structures.
Structure, 5, 1997
1ETR
DownloadVisualize
BU of 1etr by Molmil
REFINED 2.3 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF BOVINE THROMBIN COMPLEXES FORMED WITH THE BENZAMIDINE AND ARGININE-BASED THROMBIN INHIBITORS NAPAP, 4-TAPAP AND MQPA: A STARTING POINT FOR IMPROVING ANTITHROMBOTICS
分子名称: EPSILON-THROMBIN, amino{[(4S)-5-[(2R,4R)-2-carboxy-4-methylpiperidin-1-yl]-4-({[(3R)-3-methyl-1,2,3,4-tetrahydroquinolin-8-yl]sulfonyl}amino)-5-oxopentyl]amino}methaniminium
著者Bode, W, Brandstetter, H.
登録日1992-07-06
公開日1994-01-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Refined 2.3 A X-ray crystal structure of bovine thrombin complexes formed with the benzamidine and arginine-based thrombin inhibitors NAPAP, 4-TAPAP and MQPA. A starting point for improving antithrombotics.
J.Mol.Biol., 226, 1992
2B7Y
DownloadVisualize
BU of 2b7y by Molmil
Fava Bean Lectin-Glucose Complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Favin alpha chain, ...
著者Reeke Jr, G.N, Becker, J.W.
登録日2005-10-05
公開日2005-10-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Three-dimensional structure of favin: saccharide binding-cyclic permutation in leguminous lectins
Science, 234, 1986
3H8E
DownloadVisualize
BU of 3h8e by Molmil
Low pH native structure of leucine aminopeptidase from Pseudomonas putida
分子名称: Cytosol aminopeptidase
著者Kale, A, Dijkstra, B.W, Sonke, T, Thunnissen, A.M.W.H.
登録日2009-04-29
公開日2010-04-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structure of the leucine aminopeptidase from Pseudomonas putida reveals the molecular basis for its enantioselectivity and broad substrate specificity.
J.Mol.Biol., 398, 2010
2CJ1
DownloadVisualize
BU of 2cj1 by Molmil
chloroperoxidase complexed with formate (ethylene glycol cryoprotectant)
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kuhnel, K, Blankenfeldt, W, Terner, J, Schlichting, I.
登録日2006-03-26
公開日2006-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structures of Chloroperoxidase with its Bound Substrates and Complexed with Formate, Acetate, and Nitrate.
J.Biol.Chem., 281, 2006
1ZK3
DownloadVisualize
BU of 1zk3 by Molmil
Triclinic crystal structure of the apo-form of R-specific alcohol dehydrogenase (mutant G37D) from Lactobacillus brevis
分子名称: MAGNESIUM ION, R-specific alcohol dehydrogenase
著者Schlieben, N.H, Niefind, K, Muller, J, Riebel, B, Hummel, W, Schomburg, D.
登録日2005-05-02
公開日2005-06-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Atomic Resolution Structures of R-specific Alcohol Dehydrogenase from Lactobacillus brevis Provide the Structural Bases of its Substrate and Cosubstrate Specificity
J.Mol.Biol., 349, 2005
5VVV
DownloadVisualize
BU of 5vvv by Molmil
Structural Investigations of the Substrate Specificity of Human O-GlcNAcase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Protein O-GlcNAcase, a-crystallin B
著者Li, B, Jiang, J, Li, H, Hu, C.-W.
登録日2017-05-20
公開日2017-09-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the substrate binding adaptability and specificity of human O-GlcNAcase.
Nat Commun, 8, 2017
5CLO
DownloadVisualize
BU of 5clo by Molmil
Crystal structure of a 4-oxalocrotonate tautomerase mutant in complex with nitrostyrene at 2.3 Angstrom
分子名称: 2-hydroxymuconate tautomerase, trans beta nitrostyrene
著者Thunnissen, A.M.W.H, Poddar, H.
登録日2015-07-16
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Using mutability landscapes of a promiscuous tautomerase to guide the engineering of enantioselective Michaelases.
Nat Commun, 7, 2016
5GTB
DownloadVisualize
BU of 5gtb by Molmil
crystal structure of intermembrane space region of the ARC6-PDV2 complex
分子名称: Plastid division protein PDV2, Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic
著者Feng, Y, Wang, W.
登録日2016-08-19
公開日2017-03-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.871 Å)
主引用文献Structural insights into the coordination of plastid division by the ARC6-PDV2 complex
Nat Plants, 3, 2017

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon