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PDB: 109 件

4V7H
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Structure of the 80S rRNA and proteins and P/E tRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolution
分子名称: 18S rRNA, 26S ribosomal RNA, 40S ribosomal protein S0(A), ...
著者Taylor, D.J, Devkota, B, Huang, A.D, Topf, M, Narayanan, E, Sali, A, Harvey, S.C, Frank, J.
登録日2009-09-22
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Comprehensive molecular structure of the eukaryotic ribosome.
Structure, 17, 2009
7R6Z
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OXA-48 bound by Compound 3.3
分子名称: 1,2-ETHANEDIOL, 4-amino-5-hydroxynaphthalene-2,7-disulfonic acid, Beta-lactamase, ...
著者Taylor, D.M, Hu, L, Prasad, B.V.V, Sankaran, B, Palzkill, T.
登録日2021-06-24
公開日2021-12-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48.
Acs Infect Dis., 7, 2021
6XQR
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OXA-48 bound by Compound 2.2
分子名称: Beta-lactamase, CHLORIDE ION, [1,1'-biphenyl]-4,4'-disulfonic acid
著者Taylor, D.M, Hu, L, Prasad, B.V.V, Palzkill, T.
登録日2020-07-10
公開日2021-12-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48.
Acs Infect Dis., 7, 2021
6UVK
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OXA-48 bound by inhibitor CDD-97
分子名称: 1,2-ETHANEDIOL, 1-{4-[4-(2-ethoxyphenyl)piperazin-1-yl]-1,3,5-triazin-2-yl}piperidine-4-carboxylic acid, Beta-lactamase, ...
著者Taylor, D.M, Hu, L, Prasad, B.V.V, Sankaran, B, Palzkill, T.G.
登録日2019-11-02
公開日2020-05-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Identifying Oxacillinase-48 Carbapenemase Inhibitors Using DNA-Encoded Chemical Libraries.
Acs Infect Dis., 6, 2020
7L8O
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OXA-48 bound by Compound 4.3
分子名称: 1,2-ETHANEDIOL, 9H-fluorene-2,7-disulfonate, Beta-lactamase, ...
著者Taylor, D.M, Hu, L, Prasad, B.V.V, Palzkill, T.
登録日2020-12-31
公開日2021-12-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48.
Acs Infect Dis., 7, 2021
7K5V
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OXA-48 bound by Compound 3.1
分子名称: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
著者Taylor, D.M, Hu, L, Prasad, B.V.V, Palzkill, T.
登録日2020-09-17
公開日2021-12-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48.
Acs Infect Dis., 7, 2021
2P8Y
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Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDP:sordarin cryo-EM reconstruction
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE, ...
著者Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J.
登録日2007-03-23
公開日2007-05-08
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (11.7 Å)
主引用文献Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation.
Embo J., 26, 2007
2P8Z
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Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDPNP:sordarin cryo-EM reconstruction
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, Elongation factor Tu-B, ...
著者Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J.
登録日2007-03-23
公開日2007-05-08
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation.
Embo J., 26, 2007
2P8X
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Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDPNP cryo-EM reconstruction
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, Elongation factor Tu-B, ...
著者Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J.
登録日2007-03-23
公開日2007-05-08
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (9.7 Å)
主引用文献Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation.
Embo J., 26, 2007
4CLN
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BU of 4cln by Molmil
STRUCTURE OF A RECOMBINANT CALMODULIN FROM DROSOPHILA MELANOGASTER REFINED AT 2.2-ANGSTROMS RESOLUTION
分子名称: CALCIUM ION, CALMODULIN
著者Taylor, D.A, Sack, J.S, Maune, J.F, Beckingham, K, Quiocho, F.A.
登録日1991-06-24
公開日1992-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a recombinant calmodulin from Drosophila melanogaster refined at 2.2-A resolution.
J.Biol.Chem., 266, 1991
2P8W
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Fitted structure of eEF2 in the 80S:eEF2:GDPNP cryo-EM reconstruction
分子名称: Elongation factor 2, Elongation factor Tu-B, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J.
登録日2007-03-23
公開日2007-05-08
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (11.3 Å)
主引用文献Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation.
Embo J., 26, 2007
7JHQ
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OXA-48 bound by Compound 2.3
分子名称: 1,2-ETHANEDIOL, Beta-lactamase OXA-48, CHLORIDE ION, ...
著者Taylor, D.M, Hu, L, Prasad, B.V.V, Palzkill, T.
登録日2020-07-21
公開日2021-12-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48.
Acs Infect Dis., 7, 2021
7N9T
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CryoEM structure of SARS-CoV-2 Spike in complex with Nb17
分子名称: Nanobody Nb17, Spike glycoprotein
著者Huang, W, Taylor, D.
登録日2021-06-18
公開日2021-08-11
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting diverse and conserved epitopes
Nat Commun, 12, 2021
6E53
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Structure of TERT in complex with a novel telomerase inhibitor
分子名称: MAGNESIUM ION, RNA/DNA hairpin, Telomerase reverse transcriptase, ...
著者Hernandez-Sanchez, W, Huang, W, Plucinsky, B, Garcia-Vazquez, N, Berdis, A.J, Skordalakes, E, Taylor, D.J.
登録日2018-07-19
公開日2019-03-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A non-natural nucleotide uses a specific pocket to selectively inhibit telomerase activity.
Plos Biol., 17, 2019
7S4X
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Cas9:gRNA in complex with 18-20MM DNA, 1 minute time-point, kinked active conformation
分子名称: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, NTS, ...
著者Bravo, J.P.K, Taylor, D.W, Liu, M.S, Johnson, K.A.
登録日2021-09-09
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Structural basis for mismatch surveillance by CRISPR-Cas9.
Nature, 603, 2022
7S4U
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Cryo-EM structure of Cas9 in complex with 12-14MM DNA substrate, 5 minute time-point
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand, Target strand, ...
著者Bravo, J.P.K, Taylor, D.W, Liu, M.S, Johnson, K.A.
登録日2021-09-09
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Structural basis for mismatch surveillance by CRISPR-Cas9.
Nature, 603, 2022
7SBB
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Structure of type I-D Cascade bound to a ssRNA target
分子名称: Cas10d, Cas11d, Cas5d, ...
著者Schwartz, E.A, Taylor, D.W.
登録日2021-09-24
公開日2022-06-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural rearrangements allow nucleic acid discrimination by type I-D Cascade.
Nat Commun, 13, 2022
7SBA
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Structure of type I-D Cascade bound to a dsDNA target
分子名称: Cas10d, Cas11d, Cas5d, ...
著者Schwartz, E.A, Taylor, D.W.
登録日2021-09-24
公開日2022-06-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural rearrangements allow nucleic acid discrimination by type I-D Cascade.
Nat Commun, 13, 2022
7S9W
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Structure of DrmAB:ADP:DNA complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(P*TP*TP*TP*TP*TP*TP*T)-3'), DrmA, ...
著者Bravo, J.P.K, Taylor, D.W, Brounds, S.J.J, Aparicio-Maldonado, C.
登録日2021-09-21
公開日2022-06-15
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for broad anti-phage immunity by DISARM.
Nat Commun, 13, 2022
7S4V
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Cas9 bound to 12-14MM DNA, 60 min time-point, kinked conformation
分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ...
著者Bravo, J.P.K, Taylor, D.W, Liu, M.S, Johnson, K.A.
登録日2021-09-09
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Structural basis for mismatch surveillance by CRISPR-Cas9.
Nature, 603, 2022
7S9V
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DrmAB:ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, DrmA, DrmB
著者Bravo, J.P.K, Taylor, D.W, Brouns, S.J.J, Aparicio-Maldonado, C.
登録日2021-09-21
公開日2022-06-15
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for broad anti-phage immunity by DISARM.
Nat Commun, 13, 2022
8FZR
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CryoEM structure of yeast Arginyltransferase 1 (ATE1)
分子名称: Arg tRNA, Arginyl-tRNA--protein transferase 1, ZINC ION
著者Huang, W, Zhang, Y, Taylor, D.J.
登録日2023-01-29
公開日2023-04-26
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献The structural basis of tRNA recognition by arginyl-tRNA-protein transferase.
Nat Commun, 14, 2023
8TL0
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Structure of activated SAVED-CHAT filament
分子名称: CHAT domain-containing protein, RNA (5'-R(*AP*AP*A)-3')
著者Bravo, J.P.K, Taylor, D.W.
登録日2023-07-26
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Type III-B CRISPR-Cas cascade of proteolytic cleavages.
Science, 383, 2024
7KOG
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Lethocerus Myosin II complete coiled-coil domain resolved in its native environment
分子名称: Myosin heavy chain isoform Mhc_X1
著者Rahmani, H, Hu, Z, Daneshparvar, N, Taylor, D, Taylor, K.A.
登録日2020-11-09
公開日2021-03-24
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.25 Å)
主引用文献The myosin II coiled-coil domain atomic structure in its native environment.
Proc.Natl.Acad.Sci.USA, 118, 2021
8U3Y
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SpG Cas9 with NGG PAM DNA target
分子名称: CRISPR-associated endonuclease Cas9/Csn1, DNA (5'-D(P*CP*GP*TP*TP*TP*GP*TP*AP*CP*TP*CP*CP*AP*GP*CP*G)-3'), DNA (5'-D(P*TP*CP*TP*CP*AP*TP*CP*TP*TP*TP*AP*TP*GP*CP*GP*TP*C)-3'), ...
著者Bravo, J.P.K, Hibshman, G.N, Taylor, D.W.
登録日2023-09-08
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024

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