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PDB: 908 results

8P30
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Structure of human SIT1:ACE2 complex (open PD conformation) bound to L-pipecolate
Descriptor: (2S)-piperidine-2-carboxylic acid, 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H.Z, Pike, A.C.W, Chi, G, Hansen, J.S, Lee, S.G, Rodstrom, K.E.J, Bushell, S.R, Speedman, D, Evans, A, Wang, D, He, D, Shrestha, L, Nasrallah, C, Chalk, R, Moreira, T, MacLean, E.M, Marsden, B, Bountra, C, Burgess-Brown, N.A, Dafforn, T.R, Carpenter, E.P, Sauer, D.B.
Deposit date:2023-05-16
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Structure and function of the SIT1 proline transporter in complex with the COVID-19 receptor ACE2.
Nat Commun, 15, 2024
2J8T
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Human aldose reductase in complex with NADP and citrate at 0.82 angstrom
Descriptor: ALDO-KETO REDUCTASE FAMILY 1, MEMBER B1, CITRATE ANION, ...
Authors:Biadene, M, Hazemann, I, Cousido, A, Ginell, S, Sheldrick, G.M, Podjarny, A, Schneider, T.R.
Deposit date:2006-10-27
Release date:2007-05-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (0.82 Å)
Cite:The Atomic Resolution Structure of Human Aldose Reductase Reveals that Rearrangement of a Bound Ligand Allows the Opening of the Safety-Belt Loop.
Acta Crystallogr.,Sect.D, 63, 2007
8P31
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Structure of human SIT1:ACE2 complex (closed PD conformation) bound to L-pipecolate
Descriptor: (2S)-piperidine-2-carboxylic acid, 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H.Z, Pike, A.C.W, Chi, G, Hansen, J.S, Lee, S.G, Rodstrom, K.E.J, Bushell, S.R, Speedman, D, Evans, A, Wang, D, He, D, Shrestha, L, Nasrallah, C, Chalk, R, Moreira, T, MacLean, E.M, Marsden, B, Bountra, C, Burgess-Brown, N.A, Dafforn, T.R, Carpenter, E.P, Sauer, D.B.
Deposit date:2023-05-16
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structure and function of the SIT1 proline transporter in complex with the COVID-19 receptor ACE2.
Nat Commun, 15, 2024
8P2X
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Structure of human SIT1:ACE2 complex (open PD conformation)
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H.Z, Pike, A.C.W, Chi, G, Hansen, J.S, Lee, S.G, Rodstrom, K.E.J, Bushell, S.R, Speedman, D, Evans, A, Wang, D, He, D, Shrestha, L, Nasrallah, C, Chalk, R, Moreira, T, MacLean, E.M, Marsden, B, Bountra, C, Burgess-Brown, N.A, Dafforn, T.R, Carpenter, E.P, Sauer, D.B.
Deposit date:2023-05-16
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Structure and function of the SIT1 proline transporter in complex with the COVID-19 receptor ACE2.
Nat Commun, 15, 2024
8P2W
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Structure of human SIT1 (focussed map / refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Sodium- and chloride-dependent transporter XTRP3
Authors:Li, H.Z, Pike, A.C.W, Chi, G, Hansen, J.S, Lee, S.G, Rodstrom, K.E.J, Bushell, S.R, Speedman, D, Evans, A, Wang, D, He, D, Shrestha, L, Nasrallah, C, Chalk, R, Moreira, T, MacLean, E.M, Marsden, B, Bountra, C, Burgess-Brown, N.A, Dafforn, T.R, Carpenter, E.P, Sauer, D.B.
Deposit date:2023-05-16
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structure and function of the SIT1 proline transporter in complex with the COVID-19 receptor ACE2.
Nat Commun, 15, 2024
8P2Y
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Structure of human SIT1:ACE2 complex (closed PD conformation)
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H.Z, Pike, A.C.W, Chi, G, Hansen, J.S, Lee, S.G, Rodstrom, K.E.J, Bushell, S.R, Speedman, D, Evans, A, Wang, D, He, D, Shrestha, L, Nasrallah, C, Chalk, R, Moreira, T, MacLean, E.M, Marsden, B, Bountra, C, Burgess-Brown, N.A, Dafforn, T.R, Carpenter, E.P, Sauer, D.B.
Deposit date:2023-05-16
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structure and function of the SIT1 proline transporter in complex with the COVID-19 receptor ACE2.
Nat Commun, 15, 2024
8QO4
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Conserved Structures and Dynamics in 5-Proximal Regions of Betacoronavirus RNA Genomes
Descriptor: MERS-CoV-SL5
Authors:Moura, T.R, Purta, E, Bernat, A, Baulin, E, Mukherjee, S, Bujnicki, J.M.
Deposit date:2023-09-28
Release date:2024-03-06
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Conserved structures and dynamics in 5'-proximal regions of Betacoronavirus RNA genomes.
Nucleic Acids Res., 52, 2024
8QO3
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Conserved Structures and Dynamics in 5-Proximal Regions of Betacoronavirus RNA Genomes
Descriptor: RoBat-CoV-SL5
Authors:Moura, T.R, Purta, E, Bernat, A, Baulin, E, Mukherjee, S, Bujnicki, J.M.
Deposit date:2023-09-28
Release date:2024-03-06
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Conserved structures and dynamics in 5'-proximal regions of Betacoronavirus RNA genomes.
Nucleic Acids Res., 52, 2024
8QQ3
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Streptavidin with a Ni-cofactor
Descriptor: 4-[4-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]butylamino]-~{N}1,~{N}1'-di(quinolin-8-yl)cyclohexane-1,1-dicarboxamide, NICKEL (II) ION, Streptavidin
Authors:Zhang, K, Jakob, R.P, Ward, T.R.
Deposit date:2023-10-03
Release date:2024-02-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An artificial nickel chlorinase based on the biotin-streptavidin technology.
Chem.Commun.(Camb.), 60, 2024
2I46
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Crystal structure of human TPP1
Descriptor: Adrenocortical dysplasia protein homolog
Authors:Wang, F, Podell, E.R, Zaug, A.J, Yang, Y.T, Baciu, P, Else, T, Hammer, G.D, Cech, T.R, Lei, M.
Deposit date:2006-08-21
Release date:2006-11-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The POT1-TPP1 telomere complex is a telomerase processivity factor.
Nature, 445, 2007
8QO5
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Conserved Structures and Dynamics in 5-Proximal Regions of Betacoronavirus RNA Genomes
Descriptor: SARS-CoV-2-SL5
Authors:Moura, T.R, Purta, E, Bernat, A, Baulin, E, Mukherjee, S, Bujnicki, J.M.
Deposit date:2023-09-28
Release date:2024-03-06
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Conserved structures and dynamics in 5'-proximal regions of Betacoronavirus RNA genomes.
Nucleic Acids Res., 52, 2024
1L2H
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BU of 1l2h by Molmil
Crystal structure of Interleukin 1-beta F42W/W120F mutant
Descriptor: Interleukin 1-beta
Authors:Rudolph, M.G, Kelker, M.S, Schneider, T.R, Yeates, T.O, Oseroff, V, Heidary, D.K, Jennings, P.A, Wilson, I.A.
Deposit date:2002-02-21
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Use of multiple anomalous dispersion to phase highly merohedrally twinned crystals of interleukin-1beta.
Acta Crystallogr.,Sect.D, 59, 2003
2H9T
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Crystal structure of human alpha-thrombin in complex with suramin
Descriptor: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, PPACK active site thrombin inhibitor, Thrombin
Authors:Lima, L.M.T.R, Polikarpov, I, Monteiro, R.Q.
Deposit date:2006-06-11
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and thermodynamic analysis of thrombin:suramin interaction in solution and crystal phases.
Biochim.Biophys.Acta, 1794, 2009
8QEX
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Streptavidin variant with a cobalt catalyst for CH metal-catalyzed hydrogen-atom-transfer (M-HAT)
Descriptor: Streptavidin, cobalt Streptavidin
Authors:Jakob, R.P, Chen, D, Ward, T.R.
Deposit date:2023-09-01
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An evolved artificial radical cyclase enables the construction of bicyclic terpenoid scaffolds via an H-atom transfer pathway.
Nat.Chem., 2024
2GL1
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NMR solution structure of Vigna radiata Defensin 2 (VrD2)
Descriptor: PDF1
Authors:Lin, K.F, Lee, T.R, Tsai, P.H, Hsu, M.P, Chen, C.S, Lyu, P.C.
Deposit date:2006-04-04
Release date:2007-04-03
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structure-based protein engineering for alpha-amylase inhibitory activity of plant defensin.
Proteins, 68, 2007
1I4A
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BU of 1i4a by Molmil
CRYSTAL STRUCTURE OF PHOSPHORYLATION-MIMICKING MUTANT T6D OF ANNEXIN IV
Descriptor: ANNEXIN IV, CALCIUM ION, SULFATE ION
Authors:Kaetzel, M.A, Mo, Y.D, Mealy, T.R, Campos, B, Bergsma-Schutter, W, Brisson, A, Dedman, J.R, Seaton, B.A.
Deposit date:2001-02-20
Release date:2001-04-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Phosphorylation mutants elucidate the mechanism of annexin IV-mediated membrane aggregation.
Biochemistry, 40, 2001
2GWR
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Crystal structure of the response regulator protein mtrA from Mycobacterium Tuberculosis
Descriptor: CALCIUM ION, DNA-binding response regulator mtrA, GLYCEROL
Authors:Friedland, N, Mack, T.R, Yu, M, Bursey, E.H, Hung, L.W, Stock, A.M, Waldo, G.S, Terwilliger, T.C.
Deposit date:2006-05-05
Release date:2006-05-23
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Domain orientation in the inactive response regulator Mycobacterium tuberculosis MtrA provides a barrier to activation.
Biochemistry, 46, 2007
2GLX
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Crystal Structure Analysis of bacterial 1,5-AF Reductase
Descriptor: 1,5-anhydro-D-fructose reductase, ACETATE ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Dambe, T.R, Scheidig, A.J.
Deposit date:2006-04-05
Release date:2006-08-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of NADP(H)-Dependent 1,5-Anhydro-d-fructose Reductase from Sinorhizobium morelense at 2.2 A Resolution: Construction of a NADH-Accepting Mutant and Its Application in Rare Sugar Synthesis
Biochemistry, 45, 2006
1JLX
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AGGLUTININ IN COMPLEX WITH T-DISACCHARIDE
Descriptor: AGGLUTININ, FORMYL GROUP, TOLUENE, ...
Authors:Transue, T.R, Smith, A.K, Mo, H, Goldstein, I.J, Saper, M.A.
Deposit date:1997-07-23
Release date:1997-12-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of benzyl T-antigen disaccharide bound to Amaranthus caudatus agglutinin.
Nat.Struct.Biol., 4, 1997
1JTT
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Degenerate interfaces in antigen-antibody complexes
Descriptor: FORMIC ACID, Lysozyme, SODIUM ION, ...
Authors:Decanniere, K, Transue, T.R, Desmyter, A, Maes, D, Muyldermans, S, Wyns, L.
Deposit date:2001-08-22
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Degenerate interfaces in antigen-antibody complexes.
J.Mol.Biol., 313, 2001
1JGS
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Multiple Antibiotic Resistance Repressor, MarR
Descriptor: 2-HYDROXYBENZOIC ACID, MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN MARR
Authors:Alekshun, M.N, Levy, S.B, Mealy, T.R, Seaton, B.A, Head, J.F.
Deposit date:2001-06-26
Release date:2001-12-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of MarR, a regulator of multiple antibiotic resistance, at 2.3 A resolution.
Nat.Struct.Biol., 8, 2001
1JTO
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Degenerate interfaces in antigen-antibody complexes
Descriptor: Lysozyme, Vh Single-Domain Antibody
Authors:Decanniere, K, Transue, T.R, Desmyter, A, Maes, D, Muyldermans, S, Wyns, L.
Deposit date:2001-08-21
Release date:2001-10-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Degenerate interfaces in antigen-antibody complexes.
J.Mol.Biol., 313, 2001
1MPX
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ALPHA-AMINO ACID ESTER HYDROLASE LABELED WITH SELENOMETHIONINE
Descriptor: CALCIUM ION, GLYCEROL, alpha-amino acid ester hydrolase
Authors:Barends, T.R.M, Polderman-Tijmes, J.J, Jekel, P.A, Hensgens, C.M.H, de Vries, E.J, Janssen, D.B, Dijkstra, B.W.
Deposit date:2002-09-13
Release date:2003-04-15
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The sequence and crystal structure of the alpha-amino acid ester hydrolase from Xanthomonas citri define a new family of beta-lactam antibiotic acylases.
J.Biol.Chem., 278, 2003
2JYF
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Tetraloop-receptor RNA complex
Descriptor: RNA (43-MER)
Authors:Zuo, X, Wang, J, Foster, T.R, Schwieters, C.D, Tiede, D.M.
Deposit date:2007-12-13
Release date:2008-10-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Tetraloop-receptor RNA complex
To be Published
2J9X
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Tryptophan Synthase in complex with GP, alpha-D,L-glycerol-phosphate, Cs, pH6.5 - alpha aminoacrylate form - (GP)E(A-A)
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, CESIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Ngo, H, Kimmich, N, Harris, R, Niks, D, Blumenstein, L, Kulik, V, Barends, T.R, Schlichting, I, Dunn, M.F.
Deposit date:2006-11-16
Release date:2007-06-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Allosteric Regulation of Substrate Channeling in Tryptophan Synthase: Modulation of the L-Serine Reaction in Stage I of the Beta-Reaction by Alpha-Site Ligands.
Biochemistry, 46, 2007

223790

PDB entries from 2024-08-14

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