4J2L
 
 | | Crystal Structure of AXH domain complexed with Capicua | | Descriptor: | Ataxin-1, Protein capicua homolog | | Authors: | Song, J.-J, Kim, E. | | Deposit date: | 2013-02-04 | | Release date: | 2013-04-03 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (3.15 Å) | | Cite: | Structural basis of protein complex formation and reconfiguration by polyglutamine disease protein Ataxin-1 and Capicua
Genes Dev., 27, 2013
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6B9M
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6B9L
 | | Crystal structure of EphA2 with peptide 135E2 | | Descriptor: | Ephrin type-A receptor 2, HIS TAG CLEAVED OFF, peptide 135E2, ... | | Authors: | Song, J, Tan, X. | | Deposit date: | 2017-10-10 | | Release date: | 2018-10-17 | | Last modified: | 2024-07-10 | | Method: | X-RAY DIFFRACTION (3.2 Å) | | Cite: | Structure-Based Design of Novel EphA2 Agonistic Agents with Nanomolar Affinity in Vitro and in Cell.
ACS Chem. Biol., 13, 2018
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8DS8
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4J2J
 | | Crystal structure of AXH domain complex with Capicua | | Descriptor: | Ataxin-1, Protein capicua homolog | | Authors: | Song, J.-J, Kim, E. | | Deposit date: | 2013-02-04 | | Release date: | 2013-04-03 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Structural basis of protein complex formation and reconfiguration by polyglutamine disease protein Ataxin-1 and Capicua
Genes Dev., 27, 2013
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6JRP
 | | Crystal structure of CIC-HMG-ETV5-DNA complex | | Descriptor: | DNA (5'-D(*AP*TP*GP*AP*AP*TP*GP*AP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*TP*CP*AP*TP*TP*CP*AP*T)-3'), Protein capicua homolog | | Authors: | Song, J.J, Lee, H. | | Deposit date: | 2019-04-05 | | Release date: | 2019-07-31 | | Last modified: | 2024-10-16 | | Method: | X-RAY DIFFRACTION (3 Å) | | Cite: | The crystal structure of Capicua HMG-box domain complexed with the ETV5-DNA and its implications for Capicua-mediated cancers.
Febs J., 286, 2019
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9BAP
 | | CryoEM structure of Apo-DIM2 | | Descriptor: | DNA (cytosine-5-)-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION | | Authors: | Song, J, Shao, Z. | | Deposit date: | 2024-04-04 | | Release date: | 2024-07-24 | | Method: | ELECTRON MICROSCOPY (2.88 Å) | | Cite: | CryoEM structure of Apo-DIM2
To Be Published
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9BAQ
 | | CryoEM structure of DIM2-HP1-H3K9me3-DNA complex | | Descriptor: | DNA (5'-D(*AP*CP*TP*AP*CP*T)-R(P*(PYO))-D(P*CP*TP*CP*CP*TP*CP*CP*TP*AP*CP*T)-3'), DNA (5'-D(*AP*GP*TP*AP*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*TP*AP*GP*T)-3'), DNA (cytosine-5-)-methyltransferase, ... | | Authors: | Song, J, Shao, Z. | | Deposit date: | 2024-04-04 | | Release date: | 2024-07-24 | | Method: | ELECTRON MICROSCOPY (2.79 Å) | | Cite: | CryoEM structure of DIM2-HP1-H3K9me3-DNA complex
To Be Published
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9BAZ
 | | CryoEM structure of DIM2-HP1 complex | | Descriptor: | DNA (cytosine-5-)-methyltransferase, Heterochromatin protein one, S-ADENOSYL-L-HOMOCYSTEINE, ... | | Authors: | Song, J, Shao, Z. | | Deposit date: | 2024-04-05 | | Release date: | 2024-07-24 | | Method: | ELECTRON MICROSCOPY (2.76 Å) | | Cite: | CryoEM structure of DIM2-HP1 complex
To Be Published
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8FYH
 | | G4 RNA-mediated PRC2 dimer | | Descriptor: | G4 RNA, Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH2, ... | | Authors: | Song, J, Kasinath, V. | | Deposit date: | 2023-01-26 | | Release date: | 2023-10-04 | | Method: | ELECTRON MICROSCOPY (3.4 Å) | | Cite: | Structural basis for inactivation of PRC2 by G-quadruplex RNA.
Science, 381, 2023
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1M8C
 | | SOLUTION STRUCTURE OF THE T State OF TURKEY OVOMUCOID AT PH 2.5 | | Descriptor: | Ovomucoid | | Authors: | Song, J, Laskowski Jr, M, Qasim, M.A, Markley, J.L. | | Deposit date: | 2002-07-24 | | Release date: | 2002-09-04 | | Last modified: | 2021-10-27 | | Method: | SOLUTION NMR | | Cite: | Two conformational states of Turkey ovomucoid third domain at low pH: three-dimensional structures, internal dynamics, and interconversion kinetics and thermodynamics.
Biochemistry, 42, 2003
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1M8B
 | | Solution structure of the C State of turkey ovomucoid at pH 2.5 | | Descriptor: | Ovomucoid | | Authors: | Song, J, Laskowski Jr, M, Qasim, M.A, Markley, J.L. | | Deposit date: | 2002-07-24 | | Release date: | 2002-09-04 | | Last modified: | 2021-10-27 | | Method: | SOLUTION NMR | | Cite: | Two conformational states of Turkey ovomucoid third domain at low pH: three-dimensional structures, internal dynamics, and interconversion kinetics and thermodynamics.
Biochemistry, 42, 2003
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1TIZ
 | | Solution Structure of a Calmodulin-Like Calcium-Binding Domain from Arabidopsis thaliana | | Descriptor: | calmodulin-related protein, putative | | Authors: | Song, J, Zhao, Q, Thao, S, Frederick, R.O, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG) | | Deposit date: | 2004-06-02 | | Release date: | 2004-08-10 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Letter to the Editor: Solution structure of a calmodulin-like calcium-binding domain from Arabidopsis thaliana
J.Biomol.NMR, 30, 2004
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1U04
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4DA4
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6VIL
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1T0G
 | | Hypothetical protein At2g24940.1 from Arabidopsis thaliana has a cytochrome b5 like fold | | Descriptor: | cytochrome b5 domain-containing protein | | Authors: | Song, J, Vinarov, D.A, Tyler, E.M, Shahan, M.N, Tyler, R.C, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG) | | Deposit date: | 2004-04-08 | | Release date: | 2004-04-13 | | Last modified: | 2024-05-01 | | Method: | SOLUTION NMR | | Cite: | Hypothetical protein At2g24940.1 from Arabidopsis thaliana has a cytochrome b5 like fold
J.Biomol.NMR, 30, 2004
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5HDA
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7EKR
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3PTA
 | | Crystal structure of human DNMT1(646-1600) in complex with DNA | | Descriptor: | DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (cytosine-5)-methyltransferase 1, ... | | Authors: | Song, J, Patel, D.J. | | Deposit date: | 2010-12-02 | | Release date: | 2010-12-29 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (3.6 Å) | | Cite: | Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
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2FFT
 | | NMR structure of Spinach Thylakoid Soluble Phosphoprotein of 9 kDa in SDS Micelles | | Descriptor: | thylakoid soluble phosphoprotein | | Authors: | Song, J, Carlberg, I, Lee, M.S, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG) | | Deposit date: | 2005-12-20 | | Release date: | 2006-01-17 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Micelle-induced folding of spinach thylakoid soluble phosphoprotein of 9 kDa and its functional implications.
Biochemistry, 45, 2006
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2ETT
 | | Solution Structure of Human Sorting Nexin 22 PX Domain | | Descriptor: | Sorting nexin-22 | | Authors: | Song, J, Zhao, Q, Tyler, R.C, Lee, M.S, Newman, C.L, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG) | | Deposit date: | 2005-10-27 | | Release date: | 2005-11-15 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Solution structure of human sorting nexin 22.
Protein Sci., 16, 2007
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3PT9
 | | Crystal structure of mouse DNMT1(731-1602) in the free state | | Descriptor: | DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION | | Authors: | Song, J, Patel, D.J. | | Deposit date: | 2010-12-02 | | Release date: | 2010-12-29 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
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2G2B
 | | NMR structure of the human allograft inflammatory factor 1 | | Descriptor: | Allograft inflammatory factor 1 | | Authors: | Song, J, Tyler, R.C, Newman, C.L, Vinarov, D, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG) | | Deposit date: | 2006-02-15 | | Release date: | 2006-02-28 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | NMR structure of the human allograft inflammatory factor 1
To be published
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3WVZ
 | | Crystal structure of Hikeshi, a new nuclear transport receptor of Hsp70 | | Descriptor: | Protein Hikeshi | | Authors: | Song, J, Kose, S, Watanabe, A, Son, S.Y, Choi, S, Hong, R.H, Yamashita, E, Park, I.Y, Imamoto, N, Lee, S.J. | | Deposit date: | 2014-06-12 | | Release date: | 2015-03-25 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (1.88 Å) | | Cite: | Structural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s
Acta Crystallogr.,Sect.D, 71, 2015
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