Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 82 results

7XYM
DownloadVisualize
BU of 7xym by Molmil
The pre-fusion structure of Thogotovirus dhori envelope glycoprotein
Descriptor: Envelope glycoprotein
Authors:Shan, Y.Y, Zhang, M.F, Pei, D.Q.
Deposit date:2022-06-01
Release date:2023-07-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Pre- and post-fusion class III glycoprotein structures reveal viral fusion mechanism
To Be Published
4G2V
DownloadVisualize
BU of 4g2v by Molmil
Structure complex of LGN binding with FRMPD1
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, G-protein-signaling modulator 2, ...
Authors:Shang, Y, Pan, Z, Wen, W, Wang, W, Zhang, M.
Deposit date:2012-07-13
Release date:2013-01-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and biochemical characterization of the interaction between LGN and Frmpd1
J.Mol.Biol., 425, 2013
5JXB
DownloadVisualize
BU of 5jxb by Molmil
PSD-95 extended PDZ3 in complex with SynGAP PBM
Descriptor: Disks large homolog 4,SynGAP
Authors:Shang, Y, Zhang, M.
Deposit date:2016-05-13
Release date:2016-09-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Phase Transition in Postsynaptic Densities Underlies Formation of Synaptic Complexes and Synaptic Plasticity.
Cell, 166, 2016
5JXC
DownloadVisualize
BU of 5jxc by Molmil
SynGAP Coiled-coil trimer
Descriptor: Ras/Rap GTPase-activating protein SynGAP
Authors:Shang, Y, Zhang, M.
Deposit date:2016-05-13
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Phase Transition in Postsynaptic Densities Underlies Formation of Synaptic Complexes and Synaptic Plasticity.
Cell, 166, 2016
5GMO
DownloadVisualize
BU of 5gmo by Molmil
X-ray structure of carbonyl reductase SsCR
Descriptor: Protein induced by osmotic stress
Authors:Shang, Y.P, Yu, H.L, Xu, J.H.
Deposit date:2016-07-14
Release date:2017-01-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Efficient Synthesis of (R)-2-Chloro-1-(2,4-dichlorophenyl)ethanol with a Ketoreductase from Scheffersomyces stipitis CBS 6045
Adv.Synth.Catal., 359, 2017
5GNV
DownloadVisualize
BU of 5gnv by Molmil
Structure of PSD-95/MAP1A complex reveals unique target recognition mode of MAGUK GK domain
Descriptor: Disks large homolog 4, Microtubule-associated protein 1A, SULFATE ION
Authors:Shang, Y, Xia, Y, Zhu, R, Zhu, J.
Deposit date:2016-07-25
Release date:2017-08-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Structure of the PSD-95/MAP1A complex reveals a unique target recognition mode of the MAGUK GK domain
Biochem. J., 474, 2017
5B64
DownloadVisualize
BU of 5b64 by Molmil
A novel binding mode of MAGUK GK domain revealed by DLG GK domain in complex with KIF13B MBS domain
Descriptor: DLG GK, GLYCEROL, Protein Kif13b, ...
Authors:Shang, Y, Zhu, J, Zhang, M.
Deposit date:2016-05-24
Release date:2016-10-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An Atypical MAGUK GK Target Recognition Mode Revealed by the Interaction between DLG and KIF13B
Structure, 24, 2016
7F7G
DownloadVisualize
BU of 7f7g by Molmil
a linear Peptide Inhibitors in complex with GK domain
Descriptor: DLG4 GK domain, UNK-ARG-ILE-ARG-ARG-ASP-GLU-TYR-LEU-LYS-ALA-ILE-GLN-UNK
Authors:Shang, Y, Huang, X, Li, X, Zhang, M.
Deposit date:2021-06-29
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.446 Å)
Cite:Entropy of stapled peptide inhibitors in free state is the major contributor to the improvement of binding affinity with the GK domain.
Rsc Chem Biol, 2, 2021
7F7I
DownloadVisualize
BU of 7f7i by Molmil
Stapled Peptide Inhibitor in complex with PSD95 GK domain
Descriptor: ACE-ARG-ILE-ARG-ARG-ASP-GLU-TYR-LEU-LYZ-ALA-ILE-GLN-NH2, Disks large homolog 4
Authors:Shang, Y, Huang, X, Li, X, Zhang, M.
Deposit date:2021-06-29
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.595 Å)
Cite:Entropy of stapled peptide inhibitors in free state is the major contributor to the improvement of binding affinity with the GK domain.
Rsc Chem Biol, 2, 2021
5IZU
DownloadVisualize
BU of 5izu by Molmil
A new binding site outside the canonical PDZ domain determines the specific interaction between Shank and SAPAP and their function
Descriptor: SH3 and multiple ankyrin repeat domains protein 3, peptide from Disks large-associated protein 3
Authors:Shang, Y, Zeng, M, Zhang, M.
Deposit date:2016-03-26
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.494 Å)
Cite:A binding site outside the canonical PDZ domain determines the specific interaction between Shank and SAPAP and their function
Proc.Natl.Acad.Sci.USA, 113, 2016
5YWN
DownloadVisualize
BU of 5ywn by Molmil
SsCR_L211H-NADP+
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Protein induced by osmotic stress
Authors:Shang, Y.P, Chen, Q, Yu, H.L, Xu, J.H.
Deposit date:2017-11-29
Release date:2019-03-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.039 Å)
Cite:Attenuated substrate inhibition of a haloketone reductase via structure-guided loop engineering.
J.Biotechnol., 308, 2020
5YW4
DownloadVisualize
BU of 5yw4 by Molmil
Structure-Guided Engineering of Reductase: Efficient Attenuating Substrate Inhibition in Asymmetric Catalysis
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Protein induced by osmotic stress
Authors:Shang, Y.P, Chen, Q, Li, A.T, Yu, H.L, Xu, J.H.
Deposit date:2017-11-28
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:Attenuated substrate inhibition of a haloketone reductase via structure-guided loop engineering.
J.Biotechnol., 308, 2020
5YWL
DownloadVisualize
BU of 5ywl by Molmil
SsCR_L211H
Descriptor: Protein induced by osmotic stress
Authors:Shang, Y.P, Chen, Q, Li, A.T, Yu, H.L, Xu, J.H.
Deposit date:2017-11-29
Release date:2019-03-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Attenuated substrate inhibition of a haloketone reductase via structure-guided loop engineering.
J.Biotechnol., 308, 2020
4DC2
DownloadVisualize
BU of 4dc2 by Molmil
Structure of PKC in Complex with a Substrate Peptide from Par-3
Descriptor: ADENINE, Partitioning defective 3 homolog, Protein kinase C iota type
Authors:Shang, Y, Wang, C, Yu, J, Zhang, M.
Deposit date:2012-01-17
Release date:2012-07-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Substrate recognition mechanism of atypical protein kinase Cs revealed by the structure of PKC iota in complex with a substrate peptide from Par-3
Structure, 20, 2012
3RO2
DownloadVisualize
BU of 3ro2 by Molmil
Structures of the LGN/NuMA complex
Descriptor: G-protein-signaling modulator 2, GLYCEROL, peptide of Nuclear mitotic apparatus protein 1
Authors:Shang, Y, Wei, Z.
Deposit date:2011-04-25
Release date:2012-03-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:LGN/mInsc and LGN/NuMA complex structures suggest distinct functions in asymmetric cell division for the Par3/mInsc/LGN and G[alpha]i/LGN/NuMA pathways
Mol.Cell, 43, 2011
3UAT
DownloadVisualize
BU of 3uat by Molmil
Guanylate Kinase Domains of the MAGUK Family Scaffold Proteins as Specific Phospho-Protein Binding Modules
Descriptor: Disks large homolog 1, phosphor-LGN peptide
Authors:Shang, Y, Zhu, J, Wen, W, Zhang, M.
Deposit date:2011-10-22
Release date:2011-12-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Guanylate kinase domains of the MAGUK family scaffold proteins as specific phospho-protein-binding modules
Embo J., 2011
3KEX
DownloadVisualize
BU of 3kex by Molmil
Crystal structure of the catalytically inactive kinase domain of the human epidermal growth factor receptor 3 (HER3)
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Receptor tyrosine-protein kinase erbB-3
Authors:Jura, N, Shan, Y, Cao, X, Shaw, D.E, Kuriyan, J.
Deposit date:2009-10-26
Release date:2009-12-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.797 Å)
Cite:Structural analysis of the catalytically inactive kinase domain of the human EGF receptor 3.
Proc.Natl.Acad.Sci.USA, 106, 2009
2M20
DownloadVisualize
BU of 2m20 by Molmil
EGFR transmembrane - juxtamembrane (TM-JM) segment in bicelles: MD guided NMR refined structure.
Descriptor: Epidermal growth factor receptor
Authors:Endres, N.F, Das, R, Smith, A, Arkhipov, A, Kovacs, E, Huang, Y, Pelton, J.G, Shan, Y, Shaw, D.E, Wemmer, D.E, Groves, J.T, Kuriyan, J.
Deposit date:2012-12-11
Release date:2013-02-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Conformational Coupling across the Plasma Membrane in Activation of the EGF Receptor.
Cell(Cambridge,Mass.), 152, 2013
4F3L
DownloadVisualize
BU of 4f3l by Molmil
Crystal Structure of the Heterodimeric CLOCK:BMAL1 Transcriptional Activator Complex
Descriptor: BMAL1b, Circadian locomoter output cycles protein kaput
Authors:Huang, N, Chelliah, Y, Shan, Y, Taylor, C, Yoo, S, Partch, C, Green, C.B, Zhang, H, Takahashi, J.
Deposit date:2012-05-09
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.268 Å)
Cite:Crystal structure of the heterodimeric CLOCK:BMAL1 transcriptional activator complex.
Science, 337, 2012
3G6H
DownloadVisualize
BU of 3g6h by Molmil
Src Thr338Ile inhibited in the DFG-Asp-Out conformation
Descriptor: N-{4-methyl-3-[(3-{4-[(3,4,5-trimethoxyphenyl)amino]-1,3,5-triazin-2-yl}pyridin-2-yl)amino]phenyl}-3-(trifluoromethyl)benzamide, Proto-oncogene tyrosine-protein kinase Src
Authors:Seeliger, M.A, Ranjitkar, P, Kasap, C, Shan, Y, Shaw, D.E, Shah, N.P, Kuriyan, J, Maly, D.J.
Deposit date:2009-02-06
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Equally potent inhibition of c-Src and Abl by compounds that recognize inactive kinase conformations
Cancer Res., 69, 2009
3G6G
DownloadVisualize
BU of 3g6g by Molmil
Equally potent inhibition of c-Src and Abl by compounds that recognize inactive kinase conformations
Descriptor: GLYCEROL, N-{3-[(3-{4-[(4-methoxyphenyl)amino]-1,3,5-triazin-2-yl}pyridin-2-yl)amino]-4-methylphenyl}-4-[(4-methylpiperazin-1-yl)methyl]benzamide, Proto-oncogene tyrosine-protein kinase Src
Authors:Seeliger, M.A, Ranjitkar, P, Kasap, C, Shan, Y, Shaw, D.E, Shah, N.P, Kuriyan, J, Maly, D.J.
Deposit date:2009-02-06
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Equally potent inhibition of c-Src and Abl by compounds that recognize inactive kinase conformations
Cancer Res., 69, 2009
7XTK
DownloadVisualize
BU of 7xtk by Molmil
Cryo-EM structure of SLC19A1
Descriptor: Reduced folate transporter
Authors:Zhang, M.F, Shan, Y.Y.
Deposit date:2022-05-17
Release date:2023-06-21
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structure of human SLC19A1.
To Be Published
4GI7
DownloadVisualize
BU of 4gi7 by Molmil
Crystal structure of Klebsiella pneumoniae pantothenate kinase in complex with a pantothenate analogue
Descriptor: (2R)-2,4-dihydroxy-3,3-dimethyl-N-{3-oxo-3-[(pyridin-3-ylmethyl)amino]propyl}butanamide, ADENOSINE-5'-DIPHOSPHATE, Pantothenate kinase, ...
Authors:Li, B, Tempel, W, Smil, D, Bolshan, Y, Hong, B.S, Park, H.W, Structural Genomics Consortium (SGC)
Deposit date:2012-08-08
Release date:2013-04-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of Klebsiella pneumoniae pantothenate kinase in complex with N-substituted pantothenamides.
Proteins, 81, 2013
7B38
DownloadVisualize
BU of 7b38 by Molmil
Torpedo californica acetylcholinesterase complexed with Mg+2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, ...
Authors:Silman, I, Shnyrov, V.L, Ashani, Y, Roth, E, Nicolas, A, Sussman, J.L, Weiner, L.
Deposit date:2020-11-29
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Torpedo californica acetylcholinesterase is stabilized by binding of a divalent metal ion to a novel and versatile 4D motif.
Protein Sci., 30, 2021
7B8E
DownloadVisualize
BU of 7b8e by Molmil
Torpedo californica acetylcholinesterase complexed with Ca+2
Descriptor: 1,2-ETHANEDIOL, 2-[2-(2-ethoxyethoxy)ethoxy]ethanol, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Silman, I, Shnyrov, V.L, Ashani, Y, Roth, E, Nicolas, A, Sussman, J.L.
Deposit date:2020-12-12
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Torpedo californica acetylcholinesterase is stabilized by binding of a divalent metal ion to a novel and versatile 4D motif.
Protein Sci., 30, 2021

 

1234>

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon