Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1014 件

6NPS
DownloadVisualize
BU of 6nps by Molmil
Crystal structure of GH115 enzyme AxyAgu115A from Amphibacillus xylanus
分子名称: AxyAgu115A, CHLORIDE ION, GLYCEROL
著者Stogios, P.J, Skarina, T, Di Leo, R, Yan, R, Master, E, Savchenko, A.
登録日2019-01-18
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural characterization of the family GH115 alpha-glucuronidase from Amphibacillus xylanus yields insight into its coordinated action with alpha-arabinofuranosidases.
N Biotechnol, 2021
5BY0
DownloadVisualize
BU of 5by0 by Molmil
Crystal structure of magnesium-bound Duf89 protein Saccharomyces cerevisiae
分子名称: MAGNESIUM ION, Protein-glutamate O-methyltransferase
著者Nocek, B, Cuff, M, Cui, H, Xu, X, Savchenko, A, Joachimiak, A, Yakunin, A.
登録日2015-06-09
公開日2015-07-29
最終更新日2015-10-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of magnesium-bound Duf89 protein Saccharomyces cerevisiae
To Be Published
4ND9
DownloadVisualize
BU of 4nd9 by Molmil
The putative substrate binding domain of ABC-type transporter from Agrobacterium tumefaciens in open conformation
分子名称: ABC transporter, substrate binding protein (Proline/glycine/betaine)
著者Nicholls, R, Tkaczuk, K.L, Kagan, O, Chruszcz, M, Domagalski, M.J, Savchenko, A, Joachimiak, A, Murshudov, G, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2013-10-25
公開日2013-12-11
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The putative substrate binding domain of ABC-type transporter from Agrobacterium tumefaciens in open conformation
To be Published
4XA9
DownloadVisualize
BU of 4xa9 by Molmil
Crystal structure of the complex between the N-terminal domain of RavJ and LegL1 from Legionella pneumophila str. Philadelphia
分子名称: Gala protein type 1, 3 or 4, Uncharacterized protein
著者Stogios, P.J, Cuff, M.E, Nocek, B, Evdokimova, E, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-12-13
公開日2015-01-28
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol. Syst. Biol., 12, 2016
5T06
DownloadVisualize
BU of 5t06 by Molmil
Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with Hexanoyl-CoA
分子名称: 1,2-ETHANEDIOL, Acyl-CoA thioester hydrolase YbgC, HEXANOYL-COENZYME A
著者Watanabe, N, Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-08-15
公開日2016-09-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with Hexanoyl-CoA
To be published
5F13
DownloadVisualize
BU of 5f13 by Molmil
Structure of Mn bound DUF89 from Saccharomyces cerevisiae
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MANGANESE (II) ION, ...
著者Nocek, B, Skarina, T, Joachimiak, A, Savchenko, A, Yakunin, A.
登録日2015-11-30
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.393 Å)
主引用文献A family of metal-dependent phosphatases implicated in metabolite damage-control.
Nat.Chem.Biol., 12, 2016
4XX6
DownloadVisualize
BU of 4xx6 by Molmil
Crystal structure of a glycosylated endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Gloeophyllum trabeum
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-xylanase, ...
著者Stogios, P.J, Nocek, B, Xu, X, Cui, H, Lowden, M, Savchenko, A.
登録日2015-01-29
公開日2015-02-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of a glycosylated endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Gloeophyllum trabeum.
To Be Published
4QL5
DownloadVisualize
BU of 4ql5 by Molmil
Crystal structure of translation initiation factor IF-1 from Streptococcus pneumoniae TIGR4
分子名称: ACETATE ION, GLYCEROL, Translation initiation factor IF-1, ...
著者Stogios, P.J, Wawrzak, Z, Onopriyenko, O, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-06-10
公開日2014-07-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.025 Å)
主引用文献Crystal structure of translation initiation factor IF-1 from Streptococcus pneumoniae TIGR4
TO BE PUBLISHED
3R3R
DownloadVisualize
BU of 3r3r by Molmil
Structure of the YrdA ferripyochelin binding protein from Salmonella enterica
分子名称: ZINC ION, ferripyochelin binding protein
著者Anderson, S.M, Wawrzak, Z, Onopriyenko, O, Peterson, S.N, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-03-16
公開日2011-03-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure of the YrdA ferripyochelin binding protein from Salmonella enterica
TO BE PUBLISHED
6BND
DownloadVisualize
BU of 6bnd by Molmil
Crystal structure of the intrinsic colistin resistance enzyme ICR(Mc) from Moraxella catarrhalis, catalytic domain, Thr315Ala mutant mono-zinc and phosphoethanolamine complex
分子名称: PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, POLYETHYLENE GLYCOL (N=34), Phosphoethanolamine transferase, ...
著者Stogios, P.J, Evdokimova, E, Wawrzak, Z, Savchenko, A, Anderson, W.F, Satchell, K.J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-11-16
公開日2018-01-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Substrate Recognition by a Colistin Resistance Enzyme from Moraxella catarrhalis.
ACS Chem. Biol., 13, 2018
6BNE
DownloadVisualize
BU of 6bne by Molmil
Crystal structure of the intrinsic colistin resistance enzyme ICR(Mc) from Moraxella catarrhalis, catalytic domain, phosphate-bound complex
分子名称: ACETATE ION, GLYCEROL, PHOSPHATE ION, ...
著者Stogios, P.J, Evdokimova, E, Wawrzak, Z, Di Leo, R, Savchenko, A, Anderson, W.F, Satchell, K.J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-11-16
公開日2018-01-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Substrate recognition by a colistin resistance enzyme from Moraxella catarrhalis.
ACS Chem. Biol., 2018
6M8V
DownloadVisualize
BU of 6m8v by Molmil
Crystal structure of UbiX-like FMN prenyltransferase MJ0101 from Methanocaldococcus jannaschii, FMN complex
分子名称: FLAVIN MONONUCLEOTIDE, Flavin prenyltransferase UbiX, GLYCEROL, ...
著者Stogios, P.J, Skarina, T, Khusnutdinova, A, Wawrzak, Z, Yakunin, A.F, Savchenko, A.
登録日2018-08-22
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.221 Å)
主引用文献Crystal structure of UbiX-like FMN prenyltransferase MJ0101 from Methanocaldococcus jannaschii, FMN complex
To Be Published
5UE7
DownloadVisualize
BU of 5ue7 by Molmil
Crystal structure of the phosphomannomutase PMM1 from Candida albicans, apoenzyme state
分子名称: CHLORIDE ION, MAGNESIUM ION, Phosphomannomutase
著者Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-12-29
公開日2017-02-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the phosphomannomutase PMM1 from Candida albicans, apoenzyme state
To Be Published
5F49
DownloadVisualize
BU of 5f49 by Molmil
Crystal structure of an aminoglycoside acetyltransferase meta-AAC0020 from an uncultured soil metagenomic sample in complex with malonyl-coenzyme A
分子名称: COENZYME A, MAGNESIUM ION, MALONYL-COENZYME A, ...
著者Xu, Z, Skarina, T, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-12-03
公開日2015-12-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes.
ACS Infect Dis, 3, 2017
4ZMH
DownloadVisualize
BU of 4zmh by Molmil
Crystal structure of a five-domain GH115 alpha-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T
分子名称: ACETATE ION, GLYCEROL, PHOSPHATE ION, ...
著者Nocek, B, Cui, H, Wang, W, Savchenko, A.
登録日2015-05-04
公開日2016-05-04
最終更新日2016-07-13
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Biochemical and Structural Characterization of a Five-domain GH115 alpha-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T.
J.Biol.Chem., 291, 2016
5V01
DownloadVisualize
BU of 5v01 by Molmil
Crystal structure of the competence damage-inducible protein A (ComA) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578
分子名称: CHLORIDE ION, Competence damage-inducible protein A, SODIUM ION
著者Borek, D, Wawrzak, Z, Grimshaw, S, Sandoval, J, Evdokimova, E, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-02-28
公開日2017-03-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of the competence damage-inducible protein A (ComA) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578
To Be Published
3UM9
DownloadVisualize
BU of 3um9 by Molmil
Crystal Structure of the Defluorinating L-2-Haloacid Dehalogenase Bpro0530
分子名称: Haloacid dehalogenase, type II, NICKEL (II) ION, ...
著者Chan, P.W.Y, Savchenko, A, Yakunin, A.F, Edwards, E.A, Pai, E.F.
登録日2011-11-12
公開日2012-11-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination
To be Published
5CYV
DownloadVisualize
BU of 5cyv by Molmil
Crystal structure of CouR from Rhodococcus jostii RHA1 bound to p-coumaroyl-CoA
分子名称: ACETATE ION, CHLORIDE ION, MAGNESIUM ION, ...
著者Stogios, P.J, Xu, X, Dong, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2015-07-30
公開日2015-08-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献The activity of CouR, a MarR family transcriptional regulator, is modulated through a novel molecular mechanism.
Nucleic Acids Res., 44, 2016
5D9M
DownloadVisualize
BU of 5d9m by Molmil
Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14, E280A mutant in complex with the xyloglucan tetradecasaccharide XXXGXXXG
分子名称: B-1,4-endoglucanase, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Morar, M, Stogios, P.J, Xu, X, Cui, H, Di Leo, R, Yim, V, Savchenko, A.
登録日2015-08-18
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-Function Analysis of a Mixed-linkage beta-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B14.
J.Biol.Chem., 291, 2016
3UMC
DownloadVisualize
BU of 3umc by Molmil
Crystal Structure of the L-2-Haloacid Dehalogenase PA0810
分子名称: CHLORIDE ION, SODIUM ION, haloacid dehalogenase
著者Petit, P, Chan, P.W.Y, Savchenko, A, Yakunin, A.F, Edwards, E.A, Pai, E.F.
登録日2011-11-13
公開日2012-11-14
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination
To be Published
6MMZ
DownloadVisualize
BU of 6mmz by Molmil
Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H29A mutant apoenzyme
分子名称: Aminoglycoside N(3)-acetyltransferase, CHLORIDE ION, SULFATE ION
著者Stogios, P.J, Skarina, T, Xu, Z, Yim, V, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2018-10-01
公開日2018-10-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
6MGL
DownloadVisualize
BU of 6mgl by Molmil
Crystal structure of the catalytic domain from GH74 enzyme PoGH74 from Paenibacillus odorifer, D60A mutant in complex with XXLG and XGXXLG xyloglucan
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, CHLORIDE ION, GLYCEROL, ...
著者Stogios, P.J, Skarina, T, Arnal, G, Watanabe, N, Brumer, H, Savchenko, A.
登録日2018-09-14
公開日2019-01-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural enzymology reveals the molecular basis of substrate regiospecificity and processivity of an exemplar bacterial glycoside hydrolase family 74endo-xyloglucanase.
Biochem. J., 475, 2018
3UZR
DownloadVisualize
BU of 3uzr by Molmil
Crystal structure of aminoglycoside phosphotransferase APH(2'')-Ib, apo form
分子名称: 1,2-ETHANEDIOL, Aminoglycoside phosphotransferase, DI(HYDROXYETHYL)ETHER, ...
著者Stogios, P.J, Minasov, G, Singer, A.U, Tan, K, Nocek, B, Evdokimova, E, Egorova, E, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-12-07
公開日2011-12-21
最終更新日2011-12-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of aminoglycoside phosphotransferase APH(2'')-Ib, apo form
TO BE PUBLISHED
5D8M
DownloadVisualize
BU of 5d8m by Molmil
Crystal structure of the metagenomic carboxyl esterase MGS0156
分子名称: Metagenomic carboxyl esterase MGS0156
著者Cui, H, Nocek, B, Tchigvintsev, A, Popovic, A, Savchenko, A, Joachimiak, A, Yakunin, A.
登録日2015-08-17
公開日2016-10-05
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of esterase (MGS0156)
To Be Published
4O2I
DownloadVisualize
BU of 4o2i by Molmil
The crystal structure of non-LEE encoded type III effector C from Citrobacter rodentium
分子名称: Non-LEE encoded type III effector C, ZINC ION
著者Chang, C, Xu, X, Cui, H, Savchenko, A, Adkins, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
登録日2013-12-17
公開日2014-01-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of non-LEE encoded type III effector C from Citrobacter rodentium
To be Published

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon