Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 256 件

6NTP
DownloadVisualize
BU of 6ntp by Molmil
PTP1B Domain of PTP1B-LOV2 Chimera
分子名称: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1,NPH1-1
著者Hongdusit, A, Sankaran, B, Zwart, P.H, Fox, J.M.
登録日2019-01-30
公開日2020-01-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Minimally disruptive optical control of protein tyrosine phosphatase 1B.
Nat Commun, 11, 2020
3TMH
DownloadVisualize
BU of 3tmh by Molmil
Crystal structure of dual-specific A-kinase anchoring protein 2 in complex with cAMP-dependent protein kinase A type II alpha and PDZK1
分子名称: A-kinase anchor protein 10, mitochondrial, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, ...
著者Sarma, G.N, Phan, R.H, Sankaran, B, Taylor, S.S.
登録日2011-08-31
公開日2012-09-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Differential mode of D-AKAP2 to PKA isoforms: Insights from D-AKAP2 PKA RII PDZK1 ternary complex structure
To be Published
6CWV
DownloadVisualize
BU of 6cwv by Molmil
Protein Tyrosine Phosphatase 1B A122S mutant
分子名称: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
著者Hjortness, M, Zwart, P, Sankaran, B, Fox, J.M.
登録日2018-03-31
公開日2018-10-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.98002291 Å)
主引用文献Evolutionarily Conserved Allosteric Communication in Protein Tyrosine Phosphatases.
Biochemistry, 57, 2018
3HVV
DownloadVisualize
BU of 3hvv by Molmil
Escherichia coli Thiol peroxidase (Tpx) peroxidatic cysteine to serine mutant (C61S)
分子名称: Thiol peroxidase
著者Hall, A, Sankaran, B, Karplus, P.A.
登録日2009-06-16
公開日2009-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural changes common to catalysis in the Tpx peroxiredoxin subfamily.
J.Mol.Biol., 393, 2009
8U5W
DownloadVisualize
BU of 8u5w by Molmil
De novo designed pentameric helical bundle protein
分子名称: WSHC5
著者Bick, M.J, Xu, C, Sankaran, B, Baker, D.
登録日2023-09-13
公開日2024-09-25
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献De novo Design of Near Infrared Fluorescent Proteins
To Be Published
4QX5
DownloadVisualize
BU of 4qx5 by Molmil
Neutron diffraction reveals hydrogen bonds critical for cGMP-selective activation: Insights for PKG agonist design
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, IODIDE ION, cGMP-dependent protein kinase 1
著者Huang, G.Y, Gerlits, O.O, Blakeley, M.P, Sankaran, B, Kovalevsky, A.Y, Kim, C.
登録日2014-07-18
公開日2014-11-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.318 Å)
主引用文献Neutron Diffraction Reveals Hydrogen Bonds Critical for cGMP-Selective Activation: Insights for cGMP-Dependent Protein Kinase Agonist Design.
Biochemistry, 53, 2014
8FBZ
DownloadVisualize
BU of 8fbz by Molmil
Crystal Structure of apo human Glutathione Synthetase Y270E
分子名称: GLYCEROL, Glutathione synthetase, SULFATE ION
著者Stanford, S.M, Santelli, E, Sankaran, B, Murali, R, Bottini, N.
登録日2022-11-30
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Targeting prostate tumor low-molecular weight tyrosine phosphatase for oxidation-sensitizing therapy.
Sci Adv, 10, 2024
4WV9
DownloadVisualize
BU of 4wv9 by Molmil
Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with click chemistry compound (3-exo)-8,8-dimethyl-3-[4-(pyridin-4-yl)-1H-1,2,3-triazol-1-yl]-8-azoniabicyclo[3.2.1]octane
分子名称: (3-exo)-8,8-dimethyl-3-[4-(pyridin-4-yl)-1H-1,2,3-triazol-1-yl]-8-azoniabicyclo[3.2.1]octane, Soluble acetylcholine receptor
著者Talley, T.T, Bobango, J, Wu, J.M, Sankaran, B.
登録日2014-11-04
公開日2015-04-22
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with click chemistry compound.
To Be Published
6MSR
DownloadVisualize
BU of 6msr by Molmil
Crystal structure of pRO-2.5
分子名称: pRO-2.5
著者Bick, M.J, Sankaran, B, Boyken, S.E, Baker, D.
登録日2018-10-17
公開日2019-05-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献De novo design of tunable, pH-driven conformational changes.
Science, 364, 2019
6CWU
DownloadVisualize
BU of 6cwu by Molmil
Protein Tyrosine Phosphatase 1B F135Y mutant
分子名称: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
著者Hjortness, M, Zwart, P, Sankaran, B, Fox, J.M.
登録日2018-03-31
公開日2018-10-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Evolutionarily Conserved Allosteric Communication in Protein Tyrosine Phosphatases.
Biochemistry, 57, 2018
8DJY
DownloadVisualize
BU of 8djy by Molmil
The N-terminal domain of PA endonuclease from the influenza H1N1 viral polymerase in complex with 6-Bromo-2-(4,5-dihydro-1H-imidazol-2-yl)-3-hydroxypyridin-4(1H)-one
分子名称: (2M)-6-bromo-2-(4,5-dihydro-1H-imidazol-2-yl)-3-hydroxypyridin-4(1H)-one, MANGANESE (II) ION, Polymerase acidic protein
著者Kohlbrand, A.J, Stokes, R.W, Karges, J, Seo, H, Sankaran, B, Cohen, S.M.
登録日2022-07-01
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Carboxylic Acid Isostere Derivatives of Hydroxypyridinones as Core Scaffolds for Influenza Endonuclease Inhibitors.
Acs Med.Chem.Lett., 14, 2023
8DHN
DownloadVisualize
BU of 8dhn by Molmil
The N-terminal domain of PA endonuclease from the influenza H1N1 viral polymerase in complex with 6-Bromo-3-hydroxy-2-(5-methyl-1,2,4-oxadiazol-3-yl)pyridin-4(1H)-one
分子名称: (2P)-6-bromo-3-hydroxy-2-(5-methyl-1,2,4-oxadiazol-3-yl)pyridin-4(1H)-one, MANGANESE (II) ION, PA endonuclease
著者Kohlbrand, A.J, Stokes, R.W, Karges, J, Seo, H, Sankaran, B, Cohen, S.M.
登録日2022-06-27
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Carboxylic Acid Isostere Derivatives of Hydroxypyridinones as Core Scaffolds for Influenza Endonuclease Inhibitors.
Acs Med.Chem.Lett., 14, 2023
8DJV
DownloadVisualize
BU of 8djv by Molmil
The N-terminal domain of PA endonuclease from the influenza H1N1 viral polymerase in complex with 6-Bromo-3-hydroxy-N-methoxy-4-oxo-1,4-dihydropyridine-2-carboxamide
分子名称: 6-bromo-3-hydroxy-N-methoxy-4-oxo-1,4-dihydropyridine-2-carboxamide, MANGANESE (II) ION, Polymerase acidic protein
著者Kohlbrand, A.J, Stokes, R.W, Karges, J, Seo, H, Sankaran, B, Cohen, S.M.
登録日2022-07-01
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Carboxylic Acid Isostere Derivatives of Hydroxypyridinones as Core Scaffolds for Influenza Endonuclease Inhibitors.
Acs Med.Chem.Lett., 14, 2023
3HVX
DownloadVisualize
BU of 3hvx by Molmil
Escherichia coli Thiol peroxidase (Tpx) resolving cysteine to serine mutant (C95S) with an intermolecular disulfide bond
分子名称: CHLORIDE ION, Thiol peroxidase
著者Hall, A, Sankaran, B, Karplus, P.A.
登録日2009-06-16
公開日2009-10-20
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structural changes common to catalysis in the Tpx peroxiredoxin subfamily.
J.Mol.Biol., 393, 2009
4RVA
DownloadVisualize
BU of 4rva by Molmil
A triple mutant in the omega-loop of TEM-1 beta-lactamase changes the substrate profile via a large conformational change and an altered general base for deacylation
分子名称: BICARBONATE ION, Beta-lactamase TEM
著者Stojanoski, V, Chow, D.-C, Hu, L, Sankaran, B, Gilbert, H, Prasad, B.V.V, Palzkill, T.
登録日2014-11-25
公開日2015-03-04
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.4397 Å)
主引用文献A Triple Mutant in the Omega-loop of TEM-1 beta-Lactamase Changes the Substrate Profile via a Large Conformational Change and an Altered General Base for Catalysis.
J.Biol.Chem., 290, 2015
4RX3
DownloadVisualize
BU of 4rx3 by Molmil
A triple mutant in the omega-loop of TEM-1 beta-lactamase changes the substrate profile via a large conformational change and an altered general base for catalysis
分子名称: Beta-lactamase TEM, CITRATE ANION
著者Stojanoski, V, Chow, D, Hu, L, Sankaran, B, Gilbert, H, Prasad, B.V.V, Palzkill, T.
登録日2014-12-08
公開日2015-03-04
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献A Triple Mutant in the Omega-loop of TEM-1 beta-Lactamase Changes the Substrate Profile via a Large Conformational Change and an Altered General Base for Catalysis.
J.Biol.Chem., 290, 2015
8ERW
DownloadVisualize
BU of 8erw by Molmil
Precisely patterned nanofibers made from extendable protein multiplexes
分子名称: C2HR4_8r
著者Bick, M.J, Parmeggiani, F, Bethel, N.P, Sankaran, B, Baker, D.
登録日2022-10-12
公開日2023-08-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Precisely patterned nanofibres made from extendable protein multiplexes.
Nat.Chem., 15, 2023
5C67
DownloadVisualize
BU of 5c67 by Molmil
Human Mesotrypsin in complex with amyloid precursor protein inhibitor variant APPI-M17G/I18F/F34V
分子名称: Amyloid beta A4 protein, Trypsin-3
著者Kayode, O, Sankaran, B, Radisky, E.S.
登録日2015-06-22
公開日2016-05-04
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Combinatorial protein engineering of proteolytically resistant mesotrypsin inhibitors as candidates for cancer therapy.
Biochem.J., 473, 2016
5CB9
DownloadVisualize
BU of 5cb9 by Molmil
Crystal structure of C-As lyase with mercaptoethonal
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Glyoxalase/bleomycin resistance protein/dioxygenase, ...
著者Venkadesh, S, Yoshinaga, M, Sankaran, B, Kandavelu, P, Rosen, B.P.
登録日2015-06-30
公開日2016-07-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of C-As lyase with mercaptoethonal
To Be Published
5C6X
DownloadVisualize
BU of 5c6x by Molmil
Crystal structure of C-As lyase with Co(II)
分子名称: COBALT (II) ION, GLYCEROL, Glyoxalase/bleomycin resistance protein/dioxygenase, ...
著者Venkadesh, S, Yoshinaga, M, Sankaran, B, Kandavelu, P, Rosen, B.P.
登録日2015-06-23
公開日2016-07-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of C-As lyase with Co(II)
To Be Published
8G0W
DownloadVisualize
BU of 8g0w by Molmil
Crystal structure of human norovirus GII.4 P domain in complex with Nanobody M4
分子名称: Nanobody M4, VP1
著者Hu, L, Salmen, W, Sankaran, B, Prasad, B.V.V.
登録日2023-02-01
公開日2023-10-04
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Crystal structure of human norovirus GII.4 P domain in complex with Nanobody M4
To Be Published
5DRH
DownloadVisualize
BU of 5drh by Molmil
Crystal structure of apo C-As lyase
分子名称: Glyoxalase/bleomycin resistance protein/dioxygenase, SODIUM ION
著者Venkadesh, S, Yoshinaga, M, Sankaran, B, Kandavelu, P, Rosen, B.P.
登録日2015-09-15
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structure of apo C-As lyase
To Be Published
6XT4
DownloadVisualize
BU of 6xt4 by Molmil
C3_HD-1069 (1BH-69) - fusion protein of helical bundle and repeat protein
分子名称: 1BH_69
著者Bick, M.J, Hsia, Y, Sankaran, B, Baker, D.
登録日2020-07-17
公開日2020-12-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Design of multi-scale protein complexes by hierarchical building block fusion.
Nat Commun, 12, 2021
5BRX
DownloadVisualize
BU of 5brx by Molmil
X-ray crystal structure of Aplysia californica (Ac-AChBP) in complex with 2-pyridyl azatricyclo[3.3.1.13,7]decane; 2-pyridylazaadamantane; 2-Aza (TI-8480)
分子名称: (2R,3S,5R,7S)-2-(pyridin-3-yl)-1-azatricyclo[3.3.1.1~3,7~]decane, SULFATE ION, Soluble acetylcholine receptor, ...
著者Bobango, J, Sankaran, B, Park, J.F, Wu, J, Talley, T.T.
登録日2015-06-01
公開日2015-06-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Comparisons of Binding Affinities for Neuronal Nicotinic Receptors (NNRs) and AChBPs
To Be Published
6CYU
DownloadVisualize
BU of 6cyu by Molmil
Crystal structure of CTX-M-14 S70G/N106S/D240G beta-lactamase in complex with hydrolyzed cefotaxime
分子名称: (2R)-2-[(R)-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetyl]amino}(carboxy)methyl]-5-methylidene-5,6-dihydro -2H-1,3-thiazine-4-carboxylic acid, Beta-lactamase
著者Patel, M.P, Hu, L, Sankaran, B, Brown, C, Prasad, B.V.V, Palzkill, T.
登録日2018-04-06
公開日2018-10-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Synergistic effects of functionally distinct substitutions in beta-lactamase variants shed light on the evolution of bacterial drug resistance.
J. Biol. Chem., 293, 2018

234440

件を2025-04-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon