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PDB: 165 results

8EXU
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Crystal structure of PI3K-alpha in complex with compound 30
Descriptor: (2S)-2-cyclopropyl-2-({(4S,11aM)-2-[(4S)-2-oxo-4-(trifluoromethyl)-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl}amino)acetamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Kiefer, J.R, Eigenbrot, C, Staben, S.T, Hanan, E.J, Wallweber, H.J.A, Ultsch, M, Braun, M.G, Friedman, L.S, Purkey, H.E.
Deposit date:2022-10-25
Release date:2022-11-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Discovery of GDC-0077 (Inavolisib), a Highly Selective Inhibitor and Degrader of Mutant PI3K alpha.
J.Med.Chem., 65, 2022
8EXV
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Crystal structure of PI3K-alpha in complex with compound 32
Descriptor: N~2~-{(4S,11aP)-2-[(4S)-4-(difluoromethyl)-2-oxo-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl}-L-alaninamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Kiefer, J.R, Eigenbrot, C, Staben, S.T, Hanan, E.J, Wallweber, H.J.A, Ultsch, M, Braun, M.G, Friedman, L.S, Purkey, H.E.
Deposit date:2022-10-25
Release date:2022-11-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Discovery of GDC-0077 (Inavolisib), a Highly Selective Inhibitor and Degrader of Mutant PI3K alpha.
J.Med.Chem., 65, 2022
8EXL
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Crystal structure of PI3K-alpha in complex with taselisib
Descriptor: 2-methyl-2-(4-{2-[3-methyl-1-(propan-2-yl)-1H-1,2,4-triazol-5-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl}-1H-pyrazol-1-yl)propanamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Kiefer, J.R, Eigenbrot, C, Staben, S.T, Hanan, E.J, Wallweber, H.J.A, Ultsch, M, Braun, M.G, Friedman, L.S, Purkey, H.E.
Deposit date:2022-10-25
Release date:2022-11-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.989 Å)
Cite:Discovery of GDC-0077 (Inavolisib), a Highly Selective Inhibitor and Degrader of Mutant PI3K alpha.
J.Med.Chem., 65, 2022
6D20
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Crystal structure of Tyrosine-protein kinase receptor in complex with 5-(4-fluorophenyl)thieno[2,3-d]pyrimidin-4(3H)-one and 5-{[2,4-dichloro-5-(pyridin-2-yl)benzene-1-carbonyl]amino}-N-(2-hydroxy-2-methylpropyl)-1-phenyl-1H-pyrazole-3-carboxamide Inhibitors
Descriptor: 5-(4-fluorophenyl)thieno[2,3-d]pyrimidin-4(3H)-one, 5-{[2,4-dichloro-5-(pyridin-2-yl)benzene-1-carbonyl]amino}-N-(2-hydroxy-2-methylpropyl)-1-phenyl-1H-pyrazole-3-carboxamide, High affinity nerve growth factor receptor
Authors:Greasley, S.E, Johnson, E, Kraus, M.L, Cronin, C.N.
Deposit date:2018-04-12
Release date:2018-05-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Discovery of Allosteric, Potent, Subtype Selective, and Peripherally Restricted TrkA Kinase Inhibitors.
J. Med. Chem., 62, 2019
8B8G
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Cryo-EM structure of Ca2+-free mTMEM16F F518H mutant in Digitonin
Descriptor: Anoctamin-6
Authors:Arndt, M, Alvadia, C, Straub, M.S, Clerico-Mosina, V, Paulino, C, Dutzler, R.
Deposit date:2022-10-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structural basis for the activation of the lipid scramblase TMEM16F.
Nat Commun, 13, 2022
8B8K
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Cryo-EM structure of Ca2+-bound mTMEM16F N562A mutant in Digitonin closed/closed
Descriptor: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Anoctamin-6, CALCIUM ION
Authors:Arndt, M, Alvadia, C, Straub, M.S, Clerico-Mosina, V, Paulino, C, Dutzler, R.
Deposit date:2022-10-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structural basis for the activation of the lipid scramblase TMEM16F.
Nat Commun, 13, 2022
8B8J
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BU of 8b8j by Molmil
Cryo-EM structure of Ca2+-bound mTMEM16F F518H mutant in Digitonin
Descriptor: Anoctamin-6, CALCIUM ION
Authors:Arndt, M, Alvadia, C, Straub, M.S, Clerico Mosina, V, Paulino, C, Dutzler, R.
Deposit date:2022-10-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structural basis for the activation of the lipid scramblase TMEM16F.
Nat Commun, 13, 2022
8BC1
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BU of 8bc1 by Molmil
Cryo-EM Structure of Ca2+-bound mTMEM16F F518A_Q623A mutant in GDN
Descriptor: Anoctamin-6,mTMEM16F, CALCIUM ION
Authors:Arndt, M, Alvadia, C, Straub, M.S, Clerico-Mosina, V, Paulino, C, Dutzler, R.
Deposit date:2022-10-14
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structural basis for the activation of the lipid scramblase TMEM16F.
Nat Commun, 13, 2022
8B8M
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BU of 8b8m by Molmil
Cryo-EM structure of Ca2+-bound mTMEM16F N562A mutant in Digitonin open/closed
Descriptor: Anoctamin-6, CALCIUM ION
Authors:Arndt, M, Alvadia, C, Straub, M.S, Clerico-Mosina, V, Paulino, C, Dutzler, R.
Deposit date:2022-10-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Structural basis for the activation of the lipid scramblase TMEM16F.
Nat Commun, 13, 2022
8B8Q
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BU of 8b8q by Molmil
Structure of mTMEM16F in lipid Nanodiscs in the presence of Ca2+
Descriptor: Anoctamin-6, CALCIUM ION
Authors:Arndt, M, Alvadia, C, Straub, M.S, Clerico-Mosina, V, Paulino, C, Dutzler, R.
Deposit date:2022-10-04
Release date:2022-12-21
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structural basis for the activation of the lipid scramblase TMEM16F.
Nat Commun, 13, 2022
6FHS
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BU of 6fhs by Molmil
CryoEM Structure of INO80core
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Arp5, ...
Authors:Eustermann, S, Schall, K, Kostrewa, D, Strauss, M, Hopfner, K.
Deposit date:2018-01-15
Release date:2018-04-25
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.754 Å)
Cite:Structural basis for ATP-dependent chromatin remodelling by the INO80 complex.
Nature, 556, 2018
6FML
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CryoEM Structure INO80core Nucleosome complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin related protein 5, ...
Authors:Eustermann, S, Schall, K, Kostrewa, D, Strauss, M, Hopfner, K.
Deposit date:2018-01-31
Release date:2018-04-25
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.34 Å)
Cite:Structural basis for ATP-dependent chromatin remodelling by the INO80 complex.
Nature, 556, 2018
1TOR
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BU of 1tor by Molmil
MOLECULAR DYNAMICS SIMULATION FROM 2D-NMR DATA OF THE FREE ACHR MIR DECAPEPTIDE AND THE ANTIBODY-BOUND [A76]MIR ANALOGUE
Descriptor: ACETYLCHOLINE RECEPTOR, MAIN IMMUNOGENIC REGION
Authors:Orlewski, P, Tsikaris, V, Sakarellos, C, Sakarellos-Daistiotis, M, Vatzaki, E, Tzartos, S.J, Marraud, M, Cung, M.T.
Deposit date:1995-10-11
Release date:1996-03-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Compared structures of the free nicotinic acetylcholine receptor main immunogenic region (MIR) decapeptide and the antibody-bound [A76]MIR analogue: a molecular dynamics simulation from two-dimensional NMR data.
Biopolymers, 40, 1996
6NEF
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BU of 6nef by Molmil
Outer Membrane Cytochrome S Filament from Geobacter Sulfurreducens
Descriptor: C-type cytochrome OmcS, HEME C, MAGNESIUM ION
Authors:Filman, D.J, Marino, S.F, Ward, J.E, Yang, L, Mester, Z, Bullitt, E, Lovley, D.R, Strauss, M.
Deposit date:2018-12-17
Release date:2019-07-03
Last modified:2019-09-11
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Cryo-EM reveals the structural basis of long-range electron transport in a cytochrome-based bacterial nanowire.
Commun Biol, 2, 2019
8RE0
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BU of 8re0 by Molmil
Soluble glucose dehydrogenase from acinetobacter calcoaceticus - double mutant pH8
Descriptor: 3-(3,5-dicarboxy-1~{H}-pyrrol-2-yl)pyridine-2,4,6-tricarboxylic acid, CALCIUM ION, LITHIUM ION, ...
Authors:Lublin, V, Chavas, L, Stines-Chaumeil, C, Kauffmann, B, Giraud, M.F, Thompson, A.
Deposit date:2023-12-09
Release date:2024-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Does Acinetobacter calcoaceticus glucose dehydrogenase produce self-damaging H2O2?
Biosci.Rep., 44, 2024
8RG1
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Soluble glucose dehydrogenase from acinetobacter calcoaceticus - wild type pH8
Descriptor: 3-(3,5-dicarboxy-1~{H}-pyrrol-2-yl)pyridine-2,4,6-tricarboxylic acid, CALCIUM ION, LITHIUM ION, ...
Authors:Lublin, V, Chavas, L, Stines-Chaumeil, C, Kauffmann, B, Giraud, M.F, Thompson, A.
Deposit date:2023-12-13
Release date:2024-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Does Acinetobacter calcoaceticus glucose dehydrogenase produce self-damaging H2O2?
Biosci.Rep., 44, 2024
8ONT
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BU of 8ont by Molmil
Structure of Setaria italica NRAT in complex with a nanobody
Descriptor: DIUNDECYL PHOSPHATIDYL CHOLINE, NRAMP related aluminium transporter, Nanobody1
Authors:Ramanadane, K, Liziczai, M, Markovic, D, Straub, M.S, Rosalen, G.T, Udovcic, A, Dutzler, R, Manatschal, C.
Deposit date:2023-04-03
Release date:2023-04-12
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Structural and functional properties of a plant NRAMP-related aluminum transporter.
Elife, 12, 2023
8P5I
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BU of 8p5i by Molmil
Kinase domain of mutant human ULK1 in complex with compound XMD-17-51
Descriptor: 5,11-dimethyl-2-[(1-piperidin-4-ylpyrazol-4-yl)amino]pyrimido[4,5-b][1,4]benzodiazepin-6-one, GLYCEROL, MAGNESIUM ION, ...
Authors:Battista, T, Semrau, M.S, Heroux, A, Lolli, G, Storici, P.
Deposit date:2023-05-24
Release date:2024-06-05
Method:X-RAY DIFFRACTION (1.829 Å)
Cite:Crystal structures of ULK1 in complex with KCGS compounds
To Be Published
8P5K
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Kinase domain of mutant human ULK1 in complex with compound MRT68921
Descriptor: GLYCEROL, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Battista, T, Semrau, M.S, Heroux, A, Lolli, G, Storici, P.
Deposit date:2023-05-24
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.209 Å)
Cite:Crystal structures of ULK1 in complex with KCGS compounds
To Be Published
8CXP
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BU of 8cxp by Molmil
Characterisation of a Seneca Valley Virus Thermostable Mutant
Descriptor: Capsid protein VP1, Capsid protein VP3, VP2, ...
Authors:Jayawardena, N, Bostina, M, Strauss, M.
Deposit date:2022-05-22
Release date:2022-09-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.47 Å)
Cite:Characterisation of a Seneca Valley virus thermostable mutant.
Virology, 575, 2022
1TOS
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BU of 1tos by Molmil
TORPEDO CALIFORNICA ACHR RECEPTOR [ALA76] ANALOGUE COMPLEXED WITH THE ANTI-ACETYLCHOLINE MAB6 MONOCLONAL ANTIBODY
Descriptor: ACETYLCHOLINE RECEPTOR [ALA76] MIR ANALOGUE
Authors:Orlewski, P, Tsikaris, V, Sakarellos, C, Sakarellos-Daistiotis, M, Vatzaki, E, Tzartos, S.J, Marraud, M, Cung, M.T.
Deposit date:1995-10-11
Release date:1996-03-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Compared structures of the free nicotinic acetylcholine receptor main immunogenic region (MIR) decapeptide and the antibody-bound [A76]MIR analogue: a molecular dynamics simulation from two-dimensional NMR data.
Biopolymers, 40, 1996
3RWP
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BU of 3rwp by Molmil
Discovery of a Novel, Potent and Selective Inhibitor of 3-Phosphoinositide Dependent Kinase (PDK1)
Descriptor: 3-phosphoinositide-dependent protein kinase 1, GLYCEROL, SULFATE ION, ...
Authors:Greasley, S.E, Hickey, M, Ferre, R.-A, Krauss, M, Cronin, C.
Deposit date:2011-05-09
Release date:2011-11-16
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Discovery of Novel, Potent, and Selective Inhibitors of 3-Phosphoinositide-Dependent Kinase (PDK1).
J.Med.Chem., 54, 2011
8UVL
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Crystal structure of selective IRE1a inhibitor 29 at the enzyme active site
Descriptor: 1,2-ETHANEDIOL, 1-phenyl-N-(2,3,6-trifluoro-4-{[(3M)-3-(2-{[(3R,5R)-5-fluoropiperidin-3-yl]amino}pyrimidin-4-yl)pyridin-2-yl]oxy}phenyl)methanesulfonamide, Serine/threonine-protein kinase/endoribonuclease IRE1
Authors:Kiefer, J.R, Wallweber, H.A, Braun, M.-G, Wei, W, Jiang, F, Wang, W, Rudolph, J, Ashkenazi, A.
Deposit date:2023-11-03
Release date:2024-05-29
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Discovery of Potent, Selective, and Orally Available IRE1 alpha Inhibitors Demonstrating Comparable PD Modulation to IRE1 Knockdown in a Multiple Myeloma Model.
J.Med.Chem., 67, 2024
1KFU
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Crystal Structure of Human m-Calpain Form II
Descriptor: M-CALPAIN LARGE SUBUNIT, M-CALPAIN SMALL SUBUNIT
Authors:Strobl, S, Fernandez-Catalan, C, Braun, M, Huber, R, Masumoto, H, Nakagawa, K, Irie, A, Sorimachi, H, Bourenkow, G, Bartunik, H, Suzuki, K, Bode, W.
Deposit date:2001-11-23
Release date:2001-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of calcium-free human m-calpain suggests an electrostatic switch mechanism for activation by calcium.
Proc.Natl.Acad.Sci.USA, 97, 2000
7AT8
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Histone H3 recognition by nucleosome-bound PRC2 subunit EZH2.
Descriptor: Histone H2A, Histone H2B 1.1, Histone H3.2, ...
Authors:Finogenova, K, Benda, C, Schaefer, I.B, Poepsel, S, Strauss, M, Mueller, J.
Deposit date:2020-10-29
Release date:2020-12-09
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural basis for PRC2 decoding of active histone methylation marks H3K36me2/3.
Elife, 9, 2020

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