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PDB: 185 results

3GT9
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BU of 3gt9 by Molmil
Structure of an ML-IAP/XIAP chimera bound to a peptidomimetic
Descriptor: Baculoviral IAP repeat-containing 7, N-{(1S)-1-cyclohexyl-2-[(2S)-2-(4-naphthalen-1-yl-1,3-thiazol-2-yl)pyrrolidin-1-yl]-2-oxoethyl}-N~2~-methyl-L-alaninamide, ZINC ION
Authors:Franklin, M.C, Fairbrother, W.J, Cohen, F.
Deposit date:2009-03-27
Release date:2010-03-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Antagonists of inhibitor of apoptosis proteins based on thiazole amide isosteres.
Bioorg.Med.Chem.Lett., 20, 2010
1MPE
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BU of 1mpe by Molmil
Ensemble of 20 structures of the tetrameric mutant of the B1 domain of streptococcal protein G
Descriptor: Immunoglobulin G binding protein G
Authors:Frank, M.K, Dyda, F, Dobrodumov, A, Gronenborn, A.M.
Deposit date:2002-09-12
Release date:2002-10-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Core mutations switch monomeric protein GB1 into an intertwined tetramer.
Nat.Struct.Biol., 9, 2002
4NG4
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BU of 4ng4 by Molmil
Structure of phosphoglycerate kinase (CBU_1782) from Coxiella burnetii
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoglycerate kinase
Authors:Franklin, M.C, Cheung, J, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2013-11-01
Release date:2015-06-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
5HF9
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BU of 5hf9 by Molmil
Crystal structure of human acetylcholinesterase in complex with paraoxon and HI6
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Franklin, M.F, Rudolph, M.J, Ginter, C, Cassidy, M.S, Cheung, J.
Deposit date:2016-01-06
Release date:2016-06-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of paraoxon-inhibited human acetylcholinesterase reveal perturbations of the acyl loop and the dimer interface.
Proteins, 84, 2016
5HF8
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BU of 5hf8 by Molmil
Crystal structure of human acetylcholinesterase in complex with paraoxon (alternative acyl loop conformation)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Franklin, M.F, Rudolph, M.J, Ginter, C, Cassidy, M.S, Cheung, J.
Deposit date:2016-01-06
Release date:2016-06-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of paraoxon-inhibited human acetylcholinesterase reveal perturbations of the acyl loop and the dimer interface.
Proteins, 84, 2016
5HF5
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BU of 5hf5 by Molmil
Crystal structure of human acetylcholinesterase in complex with paraoxon in the unaged state (predominant acyl loop conformation)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Franklin, M.F, Rudolph, M.J, Ginter, C, Cassidy, M.S, Cheung, J.
Deposit date:2016-01-06
Release date:2016-07-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.152 Å)
Cite:Structures of paraoxon-inhibited human acetylcholinesterase reveal perturbations of the acyl loop and the dimer interface.
Proteins, 84, 2016
8EPA
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BU of 8epa by Molmil
Structure of interleukin receptor common gamma chain (IL2Rgamma) in complex with two antibodies
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cytokine receptor common subunit gamma, REGN7257 Fab heavy chain, ...
Authors:Franklin, M.C, Romero Hernandez, A.
Deposit date:2022-10-05
Release date:2023-01-25
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Blocking common gamma chain cytokine signaling ameliorates T cell-mediated pathogenesis in disease models.
Sci Transl Med, 15, 2023
5HFA
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BU of 5hfa by Molmil
Crystal structure of human acetylcholinesterase in complex with paraoxon and 2-PAM
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Franklin, M.F, Rudolph, M.J, Ginter, C, Cassidy, M.S, Cheung, J.
Deposit date:2016-01-06
Release date:2016-06-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structures of paraoxon-inhibited human acetylcholinesterase reveal perturbations of the acyl loop and the dimer interface.
Proteins, 84, 2016
5HF6
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BU of 5hf6 by Molmil
Crystal structure of human acetylcholinesterase in complex with paraoxon in the aged state
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Franklin, M.F, Rudolph, M.J, Ginter, C, Cassidy, M.S, Cheung, J.
Deposit date:2016-01-06
Release date:2016-06-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of paraoxon-inhibited human acetylcholinesterase reveal perturbations of the acyl loop and the dimer interface.
Proteins, 84, 2016
6XDG
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BU of 6xdg by Molmil
Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies
Descriptor: REGN10933 antibody Fab fragment heavy chain, REGN10933 antibody Fab fragment light chain, REGN10987 antibody Fab fragment heavy chain, ...
Authors:Franklin, M.C, Saotome, K, Romero Hernandez, A, Zhou, Y.
Deposit date:2020-06-10
Release date:2020-06-24
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Studies in humanized mice and convalescent humans yield a SARS-CoV-2 antibody cocktail.
Science, 369, 2020
6PYC
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BU of 6pyc by Molmil
Structure of kappa-on-heavy (KoH) antibody Fab bound to the cardiac hormone marinobufagenin
Descriptor: (3beta,5beta,14alpha,15beta)-3,5-dihydroxy-14,15-epoxybufa-20,22-dienolide, KoH body Fab heavy chain, KoH body Fab light chain, ...
Authors:Franklin, M.C, Macdonald, L.E, McWhirter, J, Murphy, A.J.
Deposit date:2019-07-29
Release date:2019-12-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Kappa-on-Heavy (KoH) bodies are a distinct class of fully-human antibody-like therapeutic agents with antigen-binding properties.
Proc.Natl.Acad.Sci.USA, 117, 2020
3GTA
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BU of 3gta by Molmil
Structure of an ML-IAP/XIAP chimera bound to a peptidomimetic
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Baculoviral IAP repeat-containing 7, ...
Authors:Franklin, M.C, Fairbrother, W.J, Cohen, F.
Deposit date:2009-03-27
Release date:2010-03-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Antagonists of inhibitor of apoptosis proteins based on thiazole amide isosteres.
Bioorg.Med.Chem.Lett., 20, 2010
6PYD
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BU of 6pyd by Molmil
Structure of 3E9 antibody Fab bound to marinobufagenin
Descriptor: (3beta,5beta,14alpha,15beta)-3,5-dihydroxy-14,15-epoxybufa-20,22-dienolide, 3E9 anti-marinobufagenin antibody Fab heavy chain, recloned with human IgG4 C region, ...
Authors:Franklin, M.C, Macdonald, L.E, McWhirter, J, Murphy, A.J.
Deposit date:2019-07-29
Release date:2019-12-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Kappa-on-Heavy (KoH) bodies are a distinct class of fully-human antibody-like therapeutic agents with antigen-binding properties.
Proc.Natl.Acad.Sci.USA, 117, 2020
8TGA
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BU of 8tga by Molmil
Complex of NPR1 ectodomain and REGN5381 Fab in an active-like state with no ANP bound
Descriptor: Atrial natriuretic peptide receptor 1, REGN5381 Fab heavy chain, REGN5381 Fab light chain
Authors:Franklin, M.C, Romero Hernandez, A.
Deposit date:2023-07-12
Release date:2024-07-17
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Agonist antibody to guanylate cyclase receptor NPR1 regulates vascular tone.
Nature, 633, 2024
8TG9
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BU of 8tg9 by Molmil
Complex of NPR1 ectodomain with ANP plus an allosteric activating antibody, REGN5381
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Atrial natriuretic peptide, ...
Authors:Franklin, M.C, Romero Hernandez, A.
Deposit date:2023-07-12
Release date:2024-07-17
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Agonist antibody to guanylate cyclase receptor NPR1 regulates vascular tone.
Nature, 633, 2024
9EAT
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BU of 9eat by Molmil
High-Resolution Structure of Escherichia coli Carbonic Anhydrase 2 in Space Group P4(2)2(1)2
Descriptor: Carbonic anhydrase 2, ZINC ION
Authors:Rankin, M.R, Smith, J.L.
Deposit date:2024-11-11
Release date:2024-11-20
Last modified:2025-02-12
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Serendipitous high-resolution structure of Escherichia coli carbonic anhydrase 2.
Acta Crystallogr.,Sect.F, 81, 2025
9EAW
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BU of 9eaw by Molmil
Escherichia coli Carbonic Anhydrase 2 in Space Group P2(1)2(1)2
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Rankin, M.R, Smith, J.L.
Deposit date:2024-11-11
Release date:2024-11-20
Last modified:2025-02-12
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Serendipitous high-resolution structure of Escherichia coli carbonic anhydrase 2.
Acta Crystallogr.,Sect.F, 81, 2025
9EBZ
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BU of 9ebz by Molmil
Escherichia coli Carbonic Anhydrase 2 in Space Group C222(1)
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Rankin, M.R, Smith, J.L.
Deposit date:2024-11-13
Release date:2024-11-20
Last modified:2025-02-12
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Serendipitous high-resolution structure of Escherichia coli carbonic anhydrase 2.
Acta Crystallogr.,Sect.F, 81, 2025
9E56
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BU of 9e56 by Molmil
TAD from Carmabin Biosynthetic Pathway with Disulfide between Cys2238 and Dephosphocoenzyme A - Crystal Form 2
Descriptor: Amino acid adenylation domain protein, DEPHOSPHO COENZYME A, IODIDE ION
Authors:Rankin, M.R, Smith, J.L.
Deposit date:2024-10-27
Release date:2025-02-26
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of a putative terminal amidation domain in natural product biosynthesis.
Structure, 33, 2025
9E50
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BU of 9e50 by Molmil
TAD from Carmabin Biosynthetic Pathway in complex with NAD - Crystal Form 2
Descriptor: Amino acid adenylation domain protein, IODIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Rankin, M.R, Smith, J.L.
Deposit date:2024-10-26
Release date:2025-02-26
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structure of a putative terminal amidation domain in natural product biosynthesis.
Structure, 33, 2025
9E4X
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BU of 9e4x by Molmil
TAD from Carmabin Biosynthetic Pathway - Crystal Form 2
Descriptor: Amino acid adenylation domain protein, IODIDE ION
Authors:Rankin, M.R, Smith, J.L.
Deposit date:2024-10-25
Release date:2025-02-26
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structure of a putative terminal amidation domain in natural product biosynthesis.
Structure, 33, 2025
9E4S
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BU of 9e4s by Molmil
TAD from Carmabin Biosynthetic Pathway - Crystal Form 1
Descriptor: Amino acid adenylation domain protein
Authors:Rankin, M.R, Smith, J.L.
Deposit date:2024-10-25
Release date:2025-02-26
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of a putative terminal amidation domain in natural product biosynthesis.
Structure, 33, 2025
9E4U
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BU of 9e4u by Molmil
TAD from Carmabin Biosynthetic Pathway in complex with NADH - Crystal Form 1
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Amino acid adenylation domain protein
Authors:Rankin, M.R, Smith, J.L.
Deposit date:2024-10-25
Release date:2025-02-26
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure of a putative terminal amidation domain in natural product biosynthesis.
Structure, 33, 2025
5VYF
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BU of 5vyf by Molmil
Structure of single chain Fel d 1 bound to a neutralizing antibody
Descriptor: Antibody Fab heavy chain, Antibody light chain, CALCIUM ION, ...
Authors:Franklin, M.C.
Deposit date:2017-05-25
Release date:2018-04-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Treating cat allergy with monoclonal IgG antibodies that bind allergen and prevent IgE engagement.
Nat Commun, 9, 2018
7N0U
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BU of 7n0u by Molmil
Complex of recombinant Bet v 1 with Fab fragment of REGN5713
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, REGN5713 Fab fragment heavy chain, REGN5713 Fab fragment light chain, ...
Authors:Franklin, M.C, Romero Hernandez, A.
Deposit date:2021-05-26
Release date:2021-08-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Targeting immunodominant Bet v 1 epitopes with monoclonal antibodies prevents the birch allergic response.
J.Allergy Clin.Immunol., 149, 2022

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PDB entries from 2025-05-14

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