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PDB: 708 results

1S84
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BU of 1s84 by Molmil
PORCINE TRYPSIN COVALENT COMPLEX WITH 4-AMINO BUTANOL, BORATE AND ETHYLENE GLYCOL
Descriptor: 1,2-ETHANEDIOL, 4-(1,3,2-DIOXABOROLAN-2-YLOXY)BUTAN-1-AMINIUM, CALCIUM ION, ...
Authors:Transue, T.R, Krahn, J.M, Gabel, S.A, Derose, E.F, London, R.E.
Deposit date:2004-01-30
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:X-ray and NMR characterization of covalent complexes of trypsin, borate, and alcohols.
Biochemistry, 43, 2004
3AUL
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BU of 3aul by Molmil
Crystal structure of wild-type Lys48-linked diubiquitin in an open conformation
Descriptor: Polyubiquitin-C
Authors:Hirano, T, Olivier, S, Yagi, M, Takemoto, E, Hiromoto, T, Satoh, T, Mizushima, T, Kato, K.
Deposit date:2011-02-09
Release date:2011-09-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Conformational dynamics of wild-type Lys48-linked diubiquitin in solution
J.Biol.Chem., 286, 2011
5HCU
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BU of 5hcu by Molmil
Crystal structure of mouse acetylchoinesterase inhibited by DFP
Descriptor: Acetylcholinesterase
Authors:Tran, T.H, Tong, L.
Deposit date:2016-01-04
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4151 Å)
Cite:Discovery of New Classes of Compounds that Reactivate Acetylcholinesterase Inhibited by Organophosphates.
Chembiochem, 16, 2015
7ZQL
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BU of 7zql by Molmil
d(CGCGTTAACGCG)2 B-DODECAMER AT 3100 BARS (310 MPa)
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Prange, T.
Deposit date:2022-05-01
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Behavior of B- and Z-DNA Crystals under High Hydrostatic Pressure
Crystals, 2022
7ZQN
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BU of 7zqn by Molmil
d(CGCGCG)2 Z-DNA AT 5400 BARS (540 MPa)
Descriptor: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Prange, T, Colloc'h, N, Girard, E.
Deposit date:2022-05-01
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Behavior of B- and Z-DNA Crystals under High Hydrostatic Pressure
Crystals, 2022
7ZQO
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BU of 7zqo by Molmil
d(CGCGCG)2 Z-DNA AT 7150 BARS (715 MPa)
Descriptor: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
Authors:Prange, T, Colloc'h, N, Girard, E.
Deposit date:2022-05-01
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Behavior of B- and Z-DNA Crystals under High Hydrostatic Pressure
Crystals, 2022
7ZQM
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BU of 7zqm by Molmil
d(CGCGCG)2 Z-DNA AT 3000 BARS (300 MPa)
Descriptor: MAGNESIUM ION, Z-DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
Authors:Prange, T, Colloc'h, N, Girard, E.
Deposit date:2022-05-01
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Behavior of B- and Z-DNA Crystals under High Hydrostatic Pressure
Crystals, 2022
5AF2
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BU of 5af2 by Molmil
Crystal structure of the C-terminal 2',5'-phosphodiesterase domain of group A rotavirus protein VP3
Descriptor: POLYETHYLENE GLYCOL (N=34), POTASSIUM ION, VP3
Authors:Brandmann, T, Jinek, M.
Deposit date:2015-01-16
Release date:2015-03-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Crystal Structure of the C-Terminal 2',5'-Phosphodiesterase Domain of Group a Rotavirus Protein Vp3.
Proteins, 83, 2015
1C10
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BU of 1c10 by Molmil
CRYSTAL STRUCTURE OF HEW LYSOZYME UNDER PRESSURE OF XENON (8 BAR)
Descriptor: CHLORIDE ION, PROTEIN (LYSOZYME), SODIUM ION, ...
Authors:Prange, T, Schiltz, M, Pernot, L, Colloc'h, N, Longhi, S, Bourguet, W, Fourme, R.
Deposit date:1999-07-16
Release date:1999-07-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Exploring hydrophobic sites in proteins with xenon or krypton.
Proteins, 30, 1998
5DTJ
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BU of 5dtj by Molmil
Crystal Structure of dfp-inhibited mouse acetylcholinesterase in complex with the reactivator SP-134
Descriptor: 1-[5-(2,4-dichlorophenoxy)pentyl]-1H-imidazole, Acetylcholinesterase
Authors:Tran, T.H, Tong, L.
Deposit date:2015-09-18
Release date:2015-10-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Discovery of New Classes of Compounds that Reactivate Acetylcholinesterase Inhibited by Organophosphates.
Chembiochem, 16, 2015
6GDE
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BU of 6gde by Molmil
DIHYDROOROTASE FROM AQUIFEX AEOLICUS STANDARD (P,T)
Descriptor: Dihydroorotase, ZINC ION
Authors:Prange, T, Girard, E, Herve, G, Evans, D.
Deposit date:2018-04-23
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Pressure-induced activation of latent dihydroorotase from Aquifex aeolicus as revealed by high pressure protein crystallography.
Febs J., 286, 2019
4AT3
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BU of 4at3 by Molmil
CRYSTAL STRUCTURE OF TRKB KINASE DOMAIN IN COMPLEX WITH CPD5N
Descriptor: (5Z)-5-(carbamoylimino)-3-[(5R)-6,7,8,9-tetrahydro-5H-benzo[7]annulen-5-ylsulfanyl]-2,5-dihydroisothiazole-4-carboxamide, BDNF/NT-3 GROWTH FACTORS RECEPTOR
Authors:Bertrand, T, Kothe, M, Liu, J, Dupuy, A, Rak, A, Berne, P.F, Davis, S, Gladysheva, T, Valtre, C, Crenne, J.Y, Mathieu, M.
Deposit date:2012-05-03
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:The Crystal Structures of Trka and Trkb Suggest Key Regions for Achieving Selective Inhibition.
J.Mol.Biol., 423, 2012
3RI6
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BU of 3ri6 by Molmil
A Novel Mechanism of Sulfur Transfer Catalyzed by O-Acetylhomoserine Sulfhydrylase in Methionine Biosynthetic Pathway of Wolinella succinogenes
Descriptor: O-ACETYLHOMOSERINE SULFHYDRYLASE
Authors:Tran, T.H, Krishnamoorthy, K, Begley, T.P, Ealick, S.E.
Deposit date:2011-04-13
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A novel mechanism of sulfur transfer catalyzed by O-acetylhomoserine sulfhydrylase in the methionine-biosynthetic pathway of Wolinella succinogenes.
Acta Crystallogr.,Sect.D, 67, 2011
4AT4
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BU of 4at4 by Molmil
CRYSTAL STRUCTURE OF TRKB KINASE DOMAIN IN COMPLEX WITH EX429
Descriptor: 1-[4-(4-aminothieno[2,3-d]pyrimidin-5-yl)phenyl]-3-[2-fluoro-5-(trifluoromethyl)phenyl]urea, BDNF/NT-3 GROWTH FACTORS RECEPTOR
Authors:Bertrand, T, Kothe, M, Liu, J, Dupuy, A, Rak, A, Berne, P.F, Davis, S, Gladysheva, T, Valtre, C, Crenne, J.Y, Mathieu, M.
Deposit date:2012-05-03
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:The Crystal Structures of Trka and Trkb Suggest Key Regions for Achieving Selective Inhibition.
J.Mol.Biol., 423, 2012
4AT5
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BU of 4at5 by Molmil
CRYSTAL STRUCTURE OF TRKB KINASE DOMAIN IN COMPLEX WITH GW2580
Descriptor: 5-{3-methoxy-4-[(4-methoxybenzyl)oxy]benzyl}pyrimidine-2,4-diamine, BDNF/NT-3 GROWTH FACTORS RECEPTOR, GLYCEROL
Authors:Bertrand, T, Kothe, M, Liu, J, Dupuy, A, Rak, A, Berne, P.F, Davis, S, Gladysheva, T, Valtre, C, Crenne, J.Y, Mathieu, M.
Deposit date:2012-05-03
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The Crystal Structures of Trka and Trkb Suggest Key Regions for Achieving Selective Inhibition.
J.Mol.Biol., 423, 2012
4ASZ
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BU of 4asz by Molmil
Crystal structure of apo TrkB kinase domain
Descriptor: BDNF/NT-3 GROWTH FACTORS RECEPTOR
Authors:Bertrand, T, Kothe, M, Liu, J, Dupuy, A, Rak, A, Berne, P.F, Davis, S, Gladysheva, T, Valtre, C, Crenne, J.Y, Mathieu, M.
Deposit date:2012-05-03
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structures of Trka and Trkb Suggest Key Regions for Achieving Selective Inhibition.
J.Mol.Biol., 423, 2012
1VT5
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BU of 1vt5 by Molmil
THE CRYSTAL STRUCTURE OF D(CCCCGGGG): A NEW A-FORM VARIANT WITH AN EXTENDED BACKBONE CONFORMATION
Descriptor: DNA (5'-D(*CP*CP*CP*CP*GP*GP*GP*G)-3')
Authors:Haran, T.E, Shakked, Z, Wang, A.H.-J, Rich, A.
Deposit date:1988-08-18
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The crystal structure of d(CCCCGGGG): a new A-form variant with an extended backbone conformation.
J.Biomol.Struct.Dyn., 5, 1987
6F9W
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BU of 6f9w by Molmil
Crystal structure of the LSM domain of LSM14 in complex with a C-terminal peptide of 4E-T
Descriptor: Eukaryotic translation initiation factor 4E transporter, Protein LSM14 homolog A
Authors:Brandmann, T, Jinek, M.
Deposit date:2017-12-15
Release date:2018-03-21
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (2.623 Å)
Cite:Molecular architecture of LSM14 interactions involved in the assembly of mRNA silencing complexes.
EMBO J., 37, 2018
1S6F
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BU of 1s6f by Molmil
PORCINE TRYPSIN COVALENT COMPLEX WITH BORATE AND GUANIDINE-3 INHIBITOR
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, SULFATE ION, ...
Authors:Transue, T.R, Krahn, J.M, Gabel, S.A, Derose, E.F, London, R.E.
Deposit date:2004-01-23
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray and NMR characterization of covalent complexes of trypsin, borate, and alcohols.
Biochemistry, 43, 2004
5DTI
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BU of 5dti by Molmil
Crystal structure of mouse acetylcholinesterase
Descriptor: Acetylcholinesterase
Authors:Tran, T.H, Tong, L.
Deposit date:2015-09-18
Release date:2015-10-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Discovery of New Classes of Compounds that Reactivate Acetylcholinesterase Inhibited by Organophosphates.
Chembiochem, 16, 2015
1R51
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BU of 1r51 by Molmil
URATE OXIDASE FROM ASPERGILLUS FLAVUS COMPLEXED WITH ITS INHIBITOR 8-AZAXANTHIN
Descriptor: 8-AZAXANTHINE, CYSTEINE, Uricase
Authors:Prange, T, Retailleau, P, Colloc'h, N.
Deposit date:2003-10-09
Release date:2004-03-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Complexed and ligand-free high-resolution structures of urate oxidase (Uox) from Aspergillus flavus: a reassignment of the active-site binding mode.
Acta Crystallogr.,Sect.D, 60, 2004
3QPB
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BU of 3qpb by Molmil
Crystal Structure of Streptococcus Pyogenes Uridine Phosphorylase Reveals a Subclass of the NP-I Superfamily
Descriptor: 1-O-phosphono-alpha-D-ribofuranose, URACIL, Uridine phosphorylase
Authors:Tran, T.H, Christoffersen, S, Parker, W.B, Piskur, J, Serra, I, Terreni, M, Ealick, S.E.
Deposit date:2011-02-11
Release date:2011-08-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:The Crystal Structure of Streptococcus pyogenes Uridine Phosphorylase Reveals a Distinct Subfamily of Nucleoside Phosphorylases.
Biochemistry, 50, 2011
2ZHE
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BU of 2zhe by Molmil
Exploring thrombin S3 pocket
Descriptor: Hirudin variant-2, N-cyclooctylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide, SODIUM ION, ...
Authors:Brandt, T, Baum, B, Heine, A, Klebe, G.
Deposit date:2008-02-04
Release date:2009-02-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Exploring thrombin S3 pocket
To be Published
6EBX
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BU of 6ebx by Molmil
STRUCTURE DETERMINATION OF A DIMERIC FORM OF ERABUTOXIN B, CRYSTALLIZED FROM THIOCYANATE SOLUTION
Descriptor: ERABUTOXIN B, THIOCYANATE ION
Authors:Prange, T, Saludjian, P.
Deposit date:1991-05-31
Release date:1993-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure determination of a dimeric form of erabutoxin-b, crystallized from a thiocyanate solution.
Acta Crystallogr.,Sect.B, 48, 1992
5US4
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BU of 5us4 by Molmil
Crystal structure of human KRAS G12D mutant in complex with GDP
Descriptor: GLYCEROL, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Tran, T, Kaplan, A, Stockwell, B.R, Tong, L.
Deposit date:2017-02-13
Release date:2017-03-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Multivalent Small-Molecule Pan-RAS Inhibitors.
Cell, 168, 2017

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