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PDB: 27201 results

2WBX
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Crystal structure of mouse cadherin-23 EC1
Descriptor: CADHERIN-23, CALCIUM ION
Authors:Sotomayor, M, Weihofen, W, Gaudet, R, Corey, D.P.
Deposit date:2009-03-05
Release date:2010-04-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Determinants of Cadherin-23 Function in Hearing and Deafness.
Neuron, 66, 2010
2WDE
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Termus thermophilus Sulfate thiohydrolase SoxB in complex with thiosulfate
Descriptor: MANGANESE (II) ION, SULFUR OXIDATION PROTEIN SOXB, TERTIARY-BUTYL ALCOHOL, ...
Authors:Sauve, V, Roversi, P, Leath, K.J, Garman, E.F, Antrobus, R, Lea, S.M, Berks, B.C.
Deposit date:2009-03-24
Release date:2009-06-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mechanism for the Hydrolysis of a Sulfur-Sulfur Bond Based on the Crystal Structure of the Thiosulfohydrolase Soxb.
J.Biol.Chem., 284, 2009
7VES
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BU of 7ves by Molmil
Crystal Structure of nucleotide-free Irgb6
Descriptor: T-cell-specific guanine nucleotide triphosphate-binding protein 2
Authors:Saijo-Hamano, Y, Sakai, N, Nitta, R.
Deposit date:2021-09-10
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of membrane recognition of Toxoplasma gondii vacuole by Irgb6.
Life Sci Alliance, 5, 2022
7VEX
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Crystal Structure of GTP-bound Irgb6
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, T-cell-specific guanine nucleotide triphosphate-binding protein 2
Authors:Saijo-Hamano, Y, Sakai, N, Nitta, R.
Deposit date:2021-09-10
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural basis of membrane recognition of Toxoplasma gondii vacuole by Irgb6.
Life Sci Alliance, 5, 2022
2VYO
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Chitin deacetylase family member from Encephalitozoon cuniculi
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Urch, J.E, Hurtado-Guerrero, R, Texier, C, Van Aalten, D.M.F.
Deposit date:2008-07-25
Release date:2008-08-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Functional Characterization of a Putative Polysaccharide Deacetylase of the Human Parasite Encephalitozoon Cuniculi.
Protein Sci., 18, 2009
2W22
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Activation Mechanism of Bacterial Thermoalkalophilic Lipases
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOX Y}-ETHOXY)-ETHANOL, CALCIUM ION, ...
Authors:Carrasco-Lopez, C, Godoy, C, De Las Rivas, B, Fernandez-Lorente, G, Palomo, J.M, Guisan, J.M, Fernandez-Lafuente, R, Hermoso, J.A.
Deposit date:2008-10-23
Release date:2008-12-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Activation of bacterial thermoalkalophilic lipases is spurred by dramatic structural rearrangements.
J. Biol. Chem., 284, 2009
2WD7
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PTERIDINE REDUCTASE 1 (PTR1) FROM TRYPANOSOMA BRUCEI IN COMPLEX WITH NADP AND DDD00066750
Descriptor: 6-chloro-1H-benzimidazol-2-amine, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PTERIDINE REDUCTASE
Authors:Robinson, D.A, Wyatt, P.G, Spinks, D, Brenk, R.
Deposit date:2009-03-20
Release date:2009-06-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:One Scaffold, Three Binding Modes: Novel and Selective Pteridine Reductase 1 Inhibitors Derived from Fragment Hits Discovered by Virtual Screening.
J.Med.Chem., 52, 2009
7YE3
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Crystal structure of Lactobacillus rhamnosus 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI complexed with MES
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase, ZINC ION
Authors:Yamamoto, Y, Oiki, S, Takase, R, Mikami, B, Hashimoto, W.
Deposit date:2022-07-05
Release date:2023-07-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.553 Å)
Cite:Crystal Structures of Lacticaseibacillus 4-Deoxy-L- threo- 5-hexosulose-uronate Ketol-isomerase KduI in Complex with Substrate Analogs.
J Appl Glycosci (1999), 70, 2023
7CPS
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BU of 7cps by Molmil
A 2:1 stoichiometric complex of anticancer drug 4'-Epiadriamycin bound to parallel G-quadruplex DNA [d-(TTGGGGT)]4.
Descriptor: 4'-EPIDOXORUBICIN, DNA (5'-D(*TP*TP*GP*GP*GP*GP*T)-3')
Authors:Barthwal, R, Tariq, Z, Pandav, K.
Deposit date:2020-08-07
Release date:2021-08-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A 2:1 stoichiometric complex of anticancer drug 4'-Epiadriamycin bound to parallel G-quadruplex DNA [d-(TTGGGGT)]4.
To Be Published
2W37
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CRYSTAL STRUCTURE OF THE HEXAMERIC CATABOLIC ORNITHINE TRANSCARBAMYLASE FROM Lactobacillus hilgardii
Descriptor: NICKEL (II) ION, ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC
Authors:de las Rivas, B, Fox, G.C, Angulo, I, Rodriguez, H, Munoz, R, Mancheno, J.M.
Deposit date:2008-11-06
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Hexameric Catabolic Ornithine Transcarbamylase from Lactobacillus Hilgardii: Structural Insights Into the Oligomeric Assembly and Metal Binding.
J.Mol.Biol., 393, 2009
1AQ5
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BU of 1aq5 by Molmil
HIGH-RESOLUTION SOLUTION NMR STRUCTURE OF THE TRIMERIC COILED-COIL DOMAIN OF CHICKEN CARTILAGE MATRIX PROTEIN, 20 STRUCTURES
Descriptor: CARTILAGE MATRIX PROTEIN
Authors:Dames, S.A, Wiltscheck, R, Kammerer, R.A, Engel, J, Alexandrescu, A.T.
Deposit date:1997-08-07
Release date:1998-02-11
Last modified:2021-01-13
Method:SOLUTION NMR
Cite:NMR structure of a parallel homotrimeric coiled coil.
Nat.Struct.Biol., 5, 1998
7CSK
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A 2:1 stoichiometric complex of anticancer drug Adriamycin bound to parallel G-quadruplex DNA [d-(TTGGGGT)]4.
Descriptor: DNA (5'-D(*TP*TP*GP*GP*GP*GP*T)-3'), DOXORUBICIN
Authors:Barthwal, R, Tariq, Z, Pandav, K.
Deposit date:2020-08-15
Release date:2021-08-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A 2:1 stoichiometric complex of anticancer drug Adriamycin bound to parallel G-quadruplex DNA [d-(TTGGGGT)]4.
To Be Published
1AVA
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BU of 1ava by Molmil
AMY2/BASI PROTEIN-PROTEIN COMPLEX FROM BARLEY SEED
Descriptor: BARLEY ALPHA-AMYLASE 2(CV MENUET), BARLEY ALPHA-AMYLASE/SUBTILISIN INHIBITOR, CALCIUM ION
Authors:Vallee, F, Kadziola, A, Bourne, Y, Juy, M, Svensson, B, Haser, R.
Deposit date:1997-09-15
Release date:1999-03-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Barley alpha-amylase bound to its endogenous protein inhibitor BASI: crystal structure of the complex at 1.9 A resolution.
Structure, 6, 1998
2KHV
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BU of 2khv by Molmil
Solution NMR structure of protein Nmul_A0922 from Nitrosospira multiformis. Northeast Structural Genomics Consortium target NmR38B.
Descriptor: Phage integrase
Authors:Wu, Y, Mills, J.L, Wang, D, Ciccosanti, C, Sukumaran, D.K, Jiang, M, Garcia, E, Nair, R, Rost, B, Swapna, G.V.T, Acton, T.B, Xiao, R, Everett, J, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-04-13
Release date:2009-04-21
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution NMR structure of protein Nmul_A0922 from Nitrosospira multiformis. Northeast Structural Genomics Consortium target NmR38B.
To be Published
7YBG
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BU of 7ybg by Molmil
Crystal structure of the SARS-CoV-2 papain-like protease (C111S mutant)
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, MALONIC ACID, ...
Authors:Zeng, R, Lei, J.
Deposit date:2022-06-29
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the SARS-CoV-2 papain-like protease (C111S mutant)
To Be Published
2WOS
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BU of 2wos by Molmil
Structure of human S100A7 in complex with 2,6 ANS
Descriptor: 6-[(1E)-CYCLOHEXA-2,4-DIEN-1-YLIDENEAMINO]NAPHTHALENE-2-SULFONATE, CALCIUM ION, PROTEIN S100-A7, ...
Authors:Leon, R, Murray, J.I, Cragg, G, Farnell, B, Pace, T.C, Bohne, C, Boulanger, M.J, Hof, F.
Deposit date:2009-07-27
Release date:2009-10-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification and Characterization of Binding Sites on S100A7, a Participant in Cancer and Inflammation Pathways.
Biochemistry, 48, 2009
1AUJ
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BOVINE TRYPSIN COMPLEXED TO META-CYANO-BENZYLIC INHIBITOR
Descriptor: 1-{[1-(2-AMINO-3-PHENYL-PROPIONYL)-PYRROLIDINE-2-CARBONYL]-AMINO}-2-(3-CYANO-PHENYL)-ETHANEBORONIC ACID, CALCIUM ION, TRYPSIN
Authors:Alexander, R, Smallwood, A, Kettner, C.
Deposit date:1997-08-28
Release date:1998-10-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:New inhibitors of thrombin and other trypsin-like proteases: hydrogen bonding of an aromatic cyano group with a backbone amide of the P1 binding site replaces binding of a basic side chain.
Biochemistry, 36, 1997
7YH6
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BU of 7yh6 by Molmil
Structure of SARS-CoV-2 spike RBD in complex with neutralizing antibody NIV-8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NIV-8 Fab heavy chain, NIV-8 Fab light chain, ...
Authors:Moriyama, S, Anraku, Y, Muranishi, S, Adachi, Y, Kuroda, D, Higuchi, Y, Kotaki, R, Tonouchi, K, Yumoto, K, Suzuki, T, Kita, S, Someya, T, Fukuhara, H, Kuroda, Y, Yamamoto, T, Onodera, T, Fukushi, S, Maeda, K, Nakamura-Uchiyama, F, Hashiguchi, T, Hoshino, A, Maenaka, K, Takahashi, Y.
Deposit date:2022-07-12
Release date:2023-07-19
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural delineation and computational design of SARS-CoV-2-neutralizing antibodies against Omicron subvariants.
Nat Commun, 14, 2023
2WKX
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BU of 2wkx by Molmil
Crystal structure of the native E. coli zinc amidase AmiD
Descriptor: CHLORIDE ION, GLYCEROL, N-ACETYLMURAMOYL-L-ALANINE AMIDASE AMID, ...
Authors:Petrella, S, Kerff, F, Herman, R, Genereux, C, Pennartz, A, Sauvage, E, Joris, B, Charlier, P.
Deposit date:2009-06-18
Release date:2010-01-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Specific Structural Features of the N-Acetylmuramoyl-L-Alanine Amidase Amid from Escherichia Coli and Mechanistic Implications for Enzymes of This Family.
J.Mol.Biol., 397, 2010
7YH7
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SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 (state 2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NIV-8 Fab heavy chain, ...
Authors:Moriyama, S, Anraku, Y, Muranishi, S, Adachi, Y, Kuroda, D, Higuchi, Y, Kotaki, R, Tonouchi, K, Yumoto, K, Suzuki, T, Kita, S, Someya, T, Fukuhara, H, Kuroda, Y, Yamamoto, T, Onodera, T, Fukushi, S, Maeda, K, Nakamura-Uchiyama, F, Hashiguchi, T, Hoshino, A, Maenaka, K, Takahashi, Y.
Deposit date:2022-07-13
Release date:2023-07-19
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural delineation and computational design of SARS-CoV-2-neutralizing antibodies against Omicron subvariants.
Nat Commun, 14, 2023
2WMU
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BU of 2wmu by Molmil
Crystal structure of checkpoint kinase 1 (Chk1) in complex with inhibitors
Descriptor: 6-MORPHOLIN-4-YL-9H-PURINE, SERINE/THREONINE-PROTEIN KINASE CHK1
Authors:Matthews, T.P, Klair, S, Burns, S, Boxall, K, Cherry, M, Fisher, M, Westwood, I.M, Walton, M.I, McHardy, T, Cheung, K.-M.J, Van Montfort, R, Williams, D, Aherne, G.W, Garrett, M.D, Reader, J, Collins, I.
Deposit date:2009-07-03
Release date:2009-07-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of Inhibitors of Checkpoint Kinase 1 Through Template Screening.
J.Med.Chem., 52, 2009
2WI4
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BU of 2wi4 by Molmil
Orally Active 2-Amino Thienopyrimidine Inhibitors of the Hsp90 Chaperone
Descriptor: 4-(2,4-dichlorophenyl)-5-phenyldiazenyl-pyrimidin-2-amine, HEAT SHOCK PROTEIN, HSP 90-ALPHA
Authors:Brough, P.A, Barril, X, Borgognoni, J, Chene, P, Davies, N.G.M, Davis, B, Drysdale, M.J, Dymock, B, Eccles, S.A, Garcia-Echeverria, C, Fromont, C, Hayes, A, Hubbard, R.E, Jordan, A.M, Rugaard-Jensen, M, Massey, A, Merret, A, Padfield, A, Parsons, R, Radimerski, T, Raynaud, F.I, Robertson, A, Roughley, S.D, Schoepfer, J, Simmonite, H, Surgenor, A, Valenti, M, Walls, S, Webb, P, Wood, M, Workman, P, Wright, L.M.
Deposit date:2009-05-08
Release date:2009-07-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Combining Hit Identification Strategies: Fragment- Based and in Silico Approaches to Orally Active 2-Aminothieno[2,3-D]Pyrimidine Inhibitors of the Hsp90 Molecular Chaperone.
J.Med.Chem., 52, 2009
7CX0
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BU of 7cx0 by Molmil
Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor carbidopa
Descriptor: CARBIDOPA, Decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Yu, X, Gong, M, Huang, J, Liu, W, Chen, C, Guo, R.
Deposit date:2020-09-01
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor carbidopa
to be published
7CWX
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Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis
Descriptor: DI(HYDROXYETHYL)ETHER, Decarboxylase, GLYCEROL
Authors:Yu, X, Gong, M, Huang, J, Liu, W, Chen, C, Guo, R.
Deposit date:2020-09-01
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis
to be published
2WIV
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BU of 2wiv by Molmil
Cytochrome-P450 XplA heme domain P21
Descriptor: CYTOCHROME P450-LIKE PROTEIN XPLA, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sabbadin, F, Jackson, R, Bruce, N.C, Grogan, G.
Deposit date:2009-05-18
Release date:2009-08-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The 1.5-A Structure of Xpla-Heme, an Unusual Cytochrome P450 Heme Domain that Catalyzes Reductive Biotransformation of Royal Demolition Explosive.
J.Biol.Chem., 284, 2009

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