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PDB: 27399 results

7YEM
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BU of 7yem by Molmil
TR-SFX MmCPDII-DNA complex: 200 us time-point collected in SACLA. Includes 200 us, dark, and extrapolated structure factors
Descriptor: CPD photolesion containing DNA after repair, Deoxyribodipyrimidine photo-lyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Maestre-Reyna, M, Wang, P.-H, Nango, E, Hosokawa, Y, Saft, M, Furrer, A, Yang, C.-H, Ngura Putu, E.P.G, Wu, W.-J, Emmerich, H.-J, Engilberge, S, Caramello, N, Wranik, M, Glover, H.L, Franz-Badur, S, Wu, H.-Y, Lee, C.-C, Huang, W.-C, Huang, K.-F, Chang, Y.-K, Liao, J.-H, Weng, J.-H, Gad, W, Chang, C.-W, Pang, A.H, Gashi, D, Beale, E, Ozerov, D, Milne, C, Cirelli, C, Bacellar, C, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Spadaccini, R, Royant, A, Yamamoto, J, Iwata, S, Standfuss, J, Essen, L.-O, Bessho, Y, Tsai, M.-D.
Deposit date:2022-07-06
Release date:2023-11-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Visualizing the DNA repair process by a photolyase at atomic resolution.
Science, 382, 2023
5BUA
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BU of 5bua by Molmil
Lysine 120-acetylated P53 DNA binding domain in a complex with DNA.
Descriptor: Cellular tumor antigen p53, DNA (5'-D(P*GP*GP*AP*CP*AP*TP*GP*TP*CP*C)-3'), ZINC ION
Authors:Arbely, E, Vainer, R.
Deposit date:2015-06-03
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.812 Å)
Cite:Structural Basis for p53 Lys120-Acetylation-Dependent DNA-Binding Mode.
J.Mol.Biol., 428, 2016
1MG5
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BU of 1mg5 by Molmil
Crystal structure of Drosophila melanogaster alcohol dehydrogenase complexed with NADH and acetate at 1.6 A
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ACETATE ION, alcohol dehydrogenase
Authors:Benach, J, Atrian, S, Gonzalez-Duarte, R, Ladenstein, R.
Deposit date:2002-08-14
Release date:2003-10-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Drosophila alcohol dehydrogenase: acetate-enzyme interactions and novel insights into the effects of electrostatics on catalysis
J.Mol.Biol., 345, 2005
4BGU
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BU of 4bgu by Molmil
1.50 A resolution structure of the malate dehydrogenase from Haloferax volcanii
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, ...
Authors:Talon, R, Madern, D, Girard, E.
Deposit date:2013-03-28
Release date:2014-04-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.487 Å)
Cite:Insight Into Structural Evolution of Extremophilic Proteins
To be Published
4C4F
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BU of 4c4f by Molmil
Structure-based design of orally bioavailable pyrrolopyridine inhibitors of the mitotic kinase MPS1
Descriptor: 1,2-ETHANEDIOL, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, DUAL SPECIFICITY PROTEIN KINASE TTK, ...
Authors:Naud, S, Westwood, I.M, Faisal, A, Sheldrake, P, Bavetsias, V, Atrash, B, Liu, M, Hayes, A, Schmitt, J, Wood, A, Choi, V, Boxall, K, Mak, G, Gurden, M, Valenti, M, de Haven Brandon, A, Henley, A, Baker, R, McAndrew, C, Matijssen, B, Burke, R, Eccles, S.A, Raynaud, F.I, Linardopoulos, S, van Montfort, R, Blagg, J.
Deposit date:2013-09-05
Release date:2013-12-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structure-Based Design of Orally Bioavailable 1H-Pyrrolo[3, 2-C]Pyridine Inhibitors of the Mitotic Kinase Monopolar Spindle 1 (Mps1).
J.Med.Chem., 56, 2013
7EDZ
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BU of 7edz by Molmil
Crystal Structure of human PPCS in complex with P-HoPan and AMPPNP
Descriptor: 4-[[(2R)-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]butanoic acid, GLYCEROL, MAGNESIUM ION, ...
Authors:Sharma, N, Mostert, K.J, Strauss, E, Anand, R.
Deposit date:2021-03-17
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Coenzyme A Level Modulator Hopantenate (HoPan) Inhibits Phosphopantotenoylcysteine Synthetase Activity.
Acs Chem.Biol., 16, 2021
4C4H
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BU of 4c4h by Molmil
Structure-based design of orally bioavailable pyrrolopyridine inhibitors of the mitotic kinase MPS1
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, DUAL SPECIFICITY PROTEIN KINASE TTK, tert-butyl 6-((2-chloro-4-(dimethylcarbamoyl)phenyl)amino)-2-(1-methyl-1H-pyrazol-4-yl)-1H-pyrrolo[3,2-c]pyridine-1-carboxylate
Authors:Naud, S, Westwood, I.M, Faisal, A, Sheldrake, P, Bavetsias, V, Atrash, B, Liu, M, Hayes, A, Schmitt, J, Wood, A, Choi, V, Boxall, K, Mak, G, Gurden, M, Valenti, M, de Haven Brandon, A, Henley, A, Baker, R, McAndrew, C, Matijssen, B, Burke, R, Eccles, S.A, Raynaud, F.I, Linardopoulos, S, van Montfort, R, Blagg, J.
Deposit date:2013-09-05
Release date:2013-12-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-Based Design of Orally Bioavailable 1H-Pyrrolo[3, 2-C]Pyridine Inhibitors of the Mitotic Kinase Monopolar Spindle 1 (Mps1).
J.Med.Chem., 56, 2013
4C4G
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BU of 4c4g by Molmil
Structure-based design of orally bioavailable pyrrolopyridine inhibitors of the mitotic kinase MPS1
Descriptor: 1,2-ETHANEDIOL, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, DUAL SPECIFICITY PROTEIN KINASE TTK, ...
Authors:Naud, S, Westwood, I.M, Faisal, A, Sheldrake, P, Bavetsias, V, Atrash, B, Liu, M, Hayes, A, Schmitt, J, Wood, A, Choi, V, Boxall, K, Mak, G, Gurden, M, Valenti, M, de Haven Brandon, A, Henley, A, Baker, R, McAndrew, C, Matijssen, B, Burke, R, Eccles, S.A, Raynaud, F.I, Linardopoulos, S, van Montfort, R, Blagg, J.
Deposit date:2013-09-05
Release date:2013-12-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure-Based Design of Orally Bioavailable 1H-Pyrrolo[3, 2-C]Pyridine Inhibitors of the Mitotic Kinase Monopolar Spindle 1 (Mps1).
J.Med.Chem., 56, 2013
7YYK
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BU of 7yyk by Molmil
Crystal structure of the O-fucosylated form of TSRs1-3 from the human thrombospondin 1
Descriptor: 1,2-ETHANEDIOL, Thrombospondin-1, alpha-L-fucopyranose
Authors:Berardinelli, S.J, Eletsky, A, Valero-Gonzalez, J, Ito, A, Manjunath, R, Hurtado-Guerrero, R, Prestegard, J.R, Woods, R.J, Haltiwanger, R.S.
Deposit date:2022-02-18
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:O-fucosylation stabilizes the TSR3 motif in thrombospondin-1 by interacting with nearby amino acids and protecting a disulfide bond.
J.Biol.Chem., 298, 2022
5ZSU
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BU of 5zsu by Molmil
Structure of the human homo-hexameric LRRC8A channel at 4.25 Angstroms
Descriptor: Volume-regulated anion channel subunit LRRC8A
Authors:Kasuya, G, Nakane, T, Yokoyama, T, Shirouzu, M, Ishitani, R, Nureki, O.
Deposit date:2018-04-29
Release date:2018-08-15
Last modified:2018-09-26
Method:ELECTRON MICROSCOPY (4.25 Å)
Cite:Cryo-EM structures of the human volume-regulated anion channel LRRC8.
Nat. Struct. Mol. Biol., 25, 2018
4C4I
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BU of 4c4i by Molmil
Structure-based design of orally bioavailable pyrrolopyridine inhibitors of the mitotic kinase MPS1
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, DUAL SPECIFICITY PROTEIN KINASE TTK, tert-butyl 6-{[2-chloro-4-(dimethylcarbamoyl)phenyl]amino}-2-(1,3-oxazol-5-yl)-1H-pyrrolo[3,2-c]pyridine-1-carboxylate
Authors:Naud, S, Westwood, I.M, Faisal, A, Sheldrake, P, Bavetsias, V, Atrash, B, Liu, M, Hayes, A, Schmitt, J, Wood, A, Choi, V, Boxall, K, Mak, G, Gurden, M, Valenti, M, de Haven Brandon, A, Henley, A, Baker, R, McAndrew, C, Matijssen, B, Burke, R, Eccles, S.A, Raynaud, F.I, Linardopoulos, S, van Montfort, R, Blagg, J.
Deposit date:2013-09-05
Release date:2013-12-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure-Based Design of Orally Bioavailable 1H-Pyrrolo[3, 2-C]Pyridine Inhibitors of the Mitotic Kinase Monopolar Spindle 1 (Mps1).
J.Med.Chem., 56, 2013
4C4J
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BU of 4c4j by Molmil
Structure-based design of orally bioavailable pyrrolopyridine inhibitors of the mitotic kinase MPS1
Descriptor: DUAL SPECIFICITY PROTEIN KINASE TTK, tert-butyl 6-{[2-chloro-4-(1-methyl-1H-imidazol-5-yl)phenyl]amino}-2-(1-methyl-1H-pyrazol-4-yl)-1H-pyrrolo[3,2-c]pyridine-1-carboxylate
Authors:Naud, S, Westwood, I.M, Faisal, A, Sheldrake, P, Bavetsias, V, Atrash, B, Liu, M, Hayes, A, Schmitt, J, Wood, A, Choi, V, Boxall, K, Mak, G, Gurden, M, Valenti, M, de Haven Brandon, A, Henley, A, Baker, R, McAndrew, C, Matijssen, B, Burke, R, Eccles, S.A, Raynaud, F.I, Linardopoulos, S, van Montfort, R, Blagg, J.
Deposit date:2013-09-05
Release date:2013-12-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Design of Orally Bioavailable 1H-Pyrrolo[3, 2-C]Pyridine Inhibitors of the Mitotic Kinase Monopolar Spindle 1 (Mps1).
J.Med.Chem., 56, 2013
1LEM
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BU of 1lem by Molmil
THE MONOSACCHARIDE BINDING SITE OF LENTIL LECTIN: AN X-RAY AND MOLECULAR MODELLING STUDY
Descriptor: CALCIUM ION, LECTIN, MANGANESE (II) ION, ...
Authors:Loris, R, Wyns, L.
Deposit date:1993-11-17
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:The monosaccharide binding site of lentil lectin: an X-ray and molecular modelling study.
Glycoconj.J., 11, 1994
1YVE
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BU of 1yve by Molmil
ACETOHYDROXY ACID ISOMEROREDUCTASE COMPLEXED WITH NADPH, MAGNESIUM AND INHIBITOR IPOHA (N-HYDROXY-N-ISOPROPYLOXAMATE)
Descriptor: ACETOHYDROXY ACID ISOMEROREDUCTASE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Biou, V, Dumas, R, Cohen-Addad, C, Douce, R, Job, D, Pebay-Peyroula, E.
Deposit date:1996-10-11
Release date:1997-09-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structure of plant acetohydroxy acid isomeroreductase complexed with NADPH, two magnesium ions and a herbicidal transition state analog determined at 1.65 A resolution.
EMBO J., 16, 1997
1LEN
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BU of 1len by Molmil
REFINEMENT OF TWO CRYSTAL FORMS OF LENTIL LECTIN AT 1.8 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, LECTIN, MANGANESE (II) ION, ...
Authors:Van Overberge, D, Loris, R, Wyns, L.
Deposit date:1993-11-17
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of two crystal forms of lentil lectin at 1.8 A resolution.
Proteins, 20, 1994
1TFD
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BU of 1tfd by Molmil
HIGH-RESOLUTION X-RAY STUDIES ON RABBIT SERUM TRANSFERRIN: PRELIMINARY STRUCTURE ANALYSIS OF THE N-TERMINAL HALF-MOLECULE AT 2.3 ANGSTROMS RESOLUTION
Descriptor: CARBONATE ION, FE (III) ION, TRANSFERRIN
Authors:Sarra, R, Lindley, P.F.
Deposit date:1990-08-16
Release date:1993-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High-Resolution X-Ray Studies on Rabbit Serum Transferrin: Preliminary Structure Analysis of the N-Terminal Half-Molecule at 2.3 Angstroms Resolution
Acta Crystallogr.,Sect.B, 46, 1990
1PVC
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BU of 1pvc by Molmil
REFINEMENT OF THE SABIN STRAIN OF TYPE 3 POLIOVIRUS AT 2.4 ANGSTROMS AND THE CRYSTAL STRUCTURES OF ITS VARIANTS AT 2.9 ANGSTROMS RESOLUTION
Descriptor: MYRISTIC ACID, POLIOVIRUS TYPE 3, SABIN STRAIN, ...
Authors:Syed, R, Filman, D.J, Hogle, J.M.
Deposit date:1995-03-30
Release date:1995-09-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Refinement of the Sabin Strain of Type 3 Poliovirus at 2.4 Angstroms and the Crystal Structures of its Variants at 2.9 Angstroms Resolution
To be Published
1QEY
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BU of 1qey by Molmil
NMR Structure Determination of the Tetramerization Domain of the MNT Repressor: An Asymmetric A-Helical Assembly in Slow Exchange
Descriptor: PROTEIN (REGULATORY PROTEIN MNT)
Authors:Nooren, I.M.A, George, A.V.E, Kaptein, R, Sauer, R.T, Boelens, R.
Deposit date:1999-04-03
Release date:1999-08-18
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The tetramerization domain of the Mnt repressor consists of two right-handed coiled coils.
Nat.Struct.Biol., 6, 1999
7O9J
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BU of 7o9j by Molmil
Crystal structure of DyP-type peroxidase from Dictyostelium discoideum in complex with an activated form of oxygen
Descriptor: 1,2-ETHANEDIOL, DyPA, OXYGEN MOLECULE, ...
Authors:Rai, A, Fedorov, R, Manstein, D.J.
Deposit date:2021-04-16
Release date:2021-07-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Biochemical Characterization of a Dye-Decolorizing Peroxidase from Dictyostelium discoideum .
Int J Mol Sci, 22, 2021
7O9L
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BU of 7o9l by Molmil
Dictyostelium discoideum dye decolorizing peroxidase DyPA in complex with cyanide.
Descriptor: 1,2-ETHANEDIOL, CYANIDE ION, DyPA, ...
Authors:Rai, A, Fedorov, R, Manstein, D.J.
Deposit date:2021-04-16
Release date:2021-07-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Biochemical Characterization of a Dye-Decolorizing Peroxidase from Dictyostelium discoideum .
Int J Mol Sci, 22, 2021
3KG4
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BU of 3kg4 by Molmil
Crystal structure of an uncharacterized protein from Mannheimia succiniciproducens
Descriptor: Uncharacterized protein
Authors:Bonanno, J.B, Dickey, M, Bain, K.T, Lau, C, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-28
Release date:2009-11-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of an uncharacterized protein from Mannheimia succiniciproducens
To be Published
7ODZ
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BU of 7odz by Molmil
Dictyostelium discoideum dye decolorizing peroxidase DyPA in complex with an activated form of oxygen and veratryl alcohol
Descriptor: 1,2-ETHANEDIOL, DyPA, OXYGEN MOLECULE, ...
Authors:Rai, A, Fedorov, R, Manstein, D.J.
Deposit date:2021-04-30
Release date:2021-07-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and Biochemical Characterization of a Dye-Decolorizing Peroxidase from Dictyostelium discoideum .
Int J Mol Sci, 22, 2021
4E3A
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BU of 4e3a by Molmil
CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42
Descriptor: ADENOSINE, sugar kinase protein
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Zenchek, W, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-03-09
Release date:2012-03-21
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42
To be Published
7NWD
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BU of 7nwd by Molmil
Three-quartet c-kit2 G-quadruplex stabilized by a pyrene conjugate
Descriptor: POTASSIUM ION, c-kit2_py1
Authors:Peterkova, K, Durnik, I, Marek, R, Plavec, J, Podbevsek, P.
Deposit date:2021-03-16
Release date:2021-08-04
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:c-kit2 G-quadruplex stabilized via a covalent probe: exploring G-quartet asymmetry.
Nucleic Acids Res., 49, 2021
7NQ4
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BU of 7nq4 by Molmil
Human tRNA guanine transglycosylase (TGT), RNA-bound covalent intermediate
Descriptor: 9-DEAZAGUANINE, Queuine tRNA-ribosyltransferase accessory subunit 2, Queuine tRNA-ribosyltransferase catalytic subunit 1, ...
Authors:Sievers, K, Ficner, R.
Deposit date:2021-03-01
Release date:2021-08-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Structural and functional insights into human tRNA guanine transgylcosylase.
Rna Biol., 18, 2021

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