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PDB: 100 results

4ZDA
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BU of 4zda by Molmil
Crystal structure of isocitrate dehydrogenase in complex with isocitrate and Mn from M. smegmatis
Descriptor: ISOCITRIC ACID, Isocitrate dehydrogenase (NADP) Icd2, MANGANESE (II) ION
Authors:Pojer, F, Murima, P, McKinney, J.D.
Deposit date:2015-04-17
Release date:2016-06-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:crystal structure of isocitrate dehydrogenase in complex with isocitrate and Mn from M. smegmatis
To Be Published
5MTN
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BU of 5mtn by Molmil
Monobody Mb(Lck_1) bound to Lck-Sh2
Descriptor: Monobody Mb(Lck_1), SULFATE ION, Tyrosine-protein kinase Lck
Authors:Pojer, F, Kukenshoner, T, Koide, S, Hantschel, O.
Deposit date:2017-01-10
Release date:2017-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Selective Targeting of SH2 Domain-Phosphotyrosine Interactions of Src Family Tyrosine Kinases with Monobodies.
J. Mol. Biol., 429, 2017
5MTM
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BU of 5mtm by Molmil
Monobody Mb(Lck_3) bound to Lck-SH2 domain
Descriptor: Monobody Mb(Lck_3), Tyrosine-protein kinase Lck, ZINC ION
Authors:Pojer, F, Kukenshoner, T, Koide, S, Hantschel, O.
Deposit date:2017-01-10
Release date:2017-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Selective Targeting of SH2 Domain-Phosphotyrosine Interactions of Src Family Tyrosine Kinases with Monobodies.
J. Mol. Biol., 429, 2017
2Q6K
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BU of 2q6k by Molmil
SalL with adenosine
Descriptor: ADENOSINE, DI(HYDROXYETHYL)ETHER, chlorinase
Authors:Pojer, F, Noel, J.P.
Deposit date:2007-06-05
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery and characterization of a marine bacterial SAM-dependent chlorinase
Nat.Chem.Biol., 4, 2008
2Q6L
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BU of 2q6l by Molmil
SalL double mutant Y70T/G131S with CLDA and L-MET
Descriptor: 5'-CHLORO-5'-DEOXYADENOSINE, Hypothetical protein, METHIONINE
Authors:Pojer, F, Noel, J.P.
Deposit date:2007-06-05
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Discovery and characterization of a marine bacterial SAM-dependent chlorinase
Nat.Chem.Biol., 4, 2008
4BGE
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BU of 4bge by Molmil
Crystal structure of InhA(S94A) mutant in complex with pyridomycin
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH], Pyridomycin
Authors:Pojer, F, Hartkoorn, R.C, Cole, S.T.
Deposit date:2013-03-26
Release date:2013-12-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Pyridomycin bridges the NADH- and substrate-binding pockets of the enoyl reductase InhA.
Nat. Chem. Biol., 10, 2014
4BGI
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BU of 4bgi by Molmil
Crystal structure of InhA(S94A) mutant in complex with OH-141
Descriptor: 3-hydroxy-N-[(2R,5R,6S,9S,10S,11R)-10-hydroxy-5,11-dimethyl-3,7,12-trioxo-2-(propan-2-yl)-9-(pyridin-3-ylmethyl)-1,4-dioxa-8-azacyclododecan-6-yl]pyridine-2-carboxamide, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Pojer, F, Hartkoorn, R.C, Cole, S.T.
Deposit date:2013-03-27
Release date:2013-12-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Pyridomycin bridges the NADH- and substrate-binding pockets of the enoyl reductase InhA.
Nat. Chem. Biol., 10, 2014
3RIM
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BU of 3rim by Molmil
Crystal structure of mycobacterium tuberculosis Transketolase (Rv1449c)
Descriptor: GLYCEROL, MAGNESIUM ION, THIAMINE DIPHOSPHATE, ...
Authors:Pojer, F, Fullam, E, Jones, T.A, Cole, S.T.
Deposit date:2011-04-14
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structure and function of the transketolase from Mycobacterium tuberculosis and comparison with the human enzyme.
Open Biol, 2, 2012
2F82
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BU of 2f82 by Molmil
HMG-CoA synthase from Brassica juncea in the apo-form
Descriptor: HMG-CoA synthase
Authors:Pojer, F, Ferrer, J.L, Richard, S.B, Noel, J.P.
Deposit date:2005-12-01
Release date:2006-07-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FA0
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BU of 2fa0 by Molmil
HMG-CoA synthase from Brassica juncea in complex with HMG-CoA and covalently bound to HMG-CoA
Descriptor: 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A, HMG-CoA synthase
Authors:Pojer, F, Ferrer, J.L, Richard, S.B, Noel, J.P.
Deposit date:2005-12-06
Release date:2006-07-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2F9A
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BU of 2f9a by Molmil
HMG-CoA synthase from Brassica juncea in complex with F-244
Descriptor: (7R,12R,13R)-13-formyl-12,14-dihydroxy-3,5,7-trimethyltetradeca-2,4-dienoic acid, 3-Hydroxy-3-methylglutaryl coenzyme A synthase 1
Authors:Pojer, F, Ferrer, J.L, Richard, S.B, Noel, J.P.
Deposit date:2005-12-05
Release date:2006-07-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FA3
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BU of 2fa3 by Molmil
HMG-CoA synthase from Brassica juncea in complex with acetyl-CoA and acetyl-cys117.
Descriptor: ACETYL COENZYME *A, HMG-CoA synthase
Authors:Pojer, F, Ferrer, J.L, Richard, S.B, Noel, J.P.
Deposit date:2005-12-06
Release date:2006-07-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases.
Proc.Natl.Acad.Sci.Usa, 103, 2006
4DQU
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BU of 4dqu by Molmil
Mycobacterium tuberculosis InhA-D148G mutant in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Pojer, F, Hartkoorn, R.C, Boy, S, Cole, S.T.
Deposit date:2012-02-16
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Towards a new tuberculosis drug: pyridomycin - nature's isoniazid.
EMBO Mol Med, 4, 2012
4DTI
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BU of 4dti by Molmil
Mycobacterium tuberculosis InhA-S94A mutant in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Pojer, F, Hartkoorn, R.C, Boy, S, Cole, S.T.
Deposit date:2012-02-21
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Towards a new tuberculosis drug: pyridomycin - nature's isoniazid.
EMBO Mol Med, 4, 2012
4DRE
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BU of 4dre by Molmil
Mycobacterium tuberculosis InhA in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Pojer, F, Hartkoorn, R.C, Boy, S, Cole, S.T.
Deposit date:2012-02-17
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Towards a new tuberculosis drug: pyridomycin - nature's isoniazid.
EMBO Mol Med, 4, 2012
3BWO
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BU of 3bwo by Molmil
L-tryptophan aminotransferase
Descriptor: L-tryptophan aminotransferase
Authors:Ferrer, J.-L, Noel, J.P, Pojer, F, Bowman, M, Chory, J, Tao, Y.
Deposit date:2008-01-10
Release date:2009-03-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for the shade avoidance response of plants
To be Published
3BWN
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BU of 3bwn by Molmil
L-tryptophan aminotransferase
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, L-tryptophan aminotransferase, PHENYLALANINE, ...
Authors:Ferrer, J.-L, Noel, J.P, Pojer, F, Bowman, M, Chory, J, Tao, Y.
Deposit date:2008-01-10
Release date:2008-04-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for shade avoidance in plants
Cell(Cambridge,Mass.), 133, 2008
7QUV
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BU of 7quv by Molmil
Crystal structure of human Calprotectin (S100A8/S100A9) in complex with Peptide 3
Descriptor: 1,2-ETHANEDIOL, 4-methanoyl-2-(6-oxidanyl-3-oxidanylidene-4~{H}-xanthen-9-yl)benzoic acid, AMINO GROUP, ...
Authors:Diaz-Perlas, C, Heinis, C, Pojer, F, Lau, K.
Deposit date:2022-01-19
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:High-affinity peptides developed against calprotectin and their application as synthetic ligands in diagnostic assays.
Nat Commun, 14, 2023
6HTF
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BU of 6htf by Molmil
Crystal structure of human Btk SH2 domain bound to rF10 repebody
Descriptor: Tyrosine-protein kinase BTK, rF10 repebody
Authors:Duarte, D.P, Pojer, F, Hantschel, O.
Deposit date:2018-10-04
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Btk SH2-kinase interface is critical for allosteric kinase activation and its targeting inhibits B-cell neoplasms.
Nat Commun, 11, 2020
6O02
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BU of 6o02 by Molmil
Monobody (MC3) bound to tyrosine kinase binding domain of E3 ubiquitin ligase CBL
Descriptor: E3 ubiquitin-protein ligase CBL, Monobody (MC3)
Authors:Kukenshoner, T, Pojer, F, Hantschel, O.
Deposit date:2019-02-15
Release date:2020-08-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.953 Å)
Cite:Monobody (MC3) bound to tyrosine kinase binding domain of E3 ubiquitin ligase CBL
To Be Published
6O03
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BU of 6o03 by Molmil
Monobody (MC17) bound to tyrosine kinase binding domain of E3 ubiquitin ligase CBL
Descriptor: E3 ubiquitin-protein ligase CBL, Monobody (MC17)
Authors:Kukenshoner, T, Pojer, F, Hantschel, O.
Deposit date:2019-02-15
Release date:2020-08-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Monobody (MC17) bound to tyrosine kinase binding domain of E3 ligase CBL
To Be Published
6TLC
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BU of 6tlc by Molmil
Unphosphorylated human STAT3 in complex with MS3-6 monobody
Descriptor: Monobody, Signal transducer and activator of transcription 3
Authors:La Sala, G, Lau, K, Reynaud, A, Pojer, F, Hantschel, O.
Deposit date:2019-12-02
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Selective inhibition of STAT3 signaling using monobodies targeting the coiled-coil and N-terminal domains.
Nat Commun, 11, 2020
6TWB
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BU of 6twb by Molmil
Crystal Structure of the Catalytic Domain of Coagulation Factor XIa in Complex with Double Bridged Peptide F19
Descriptor: AMMONIUM ION, Coagulation factor XI, Double Bridged Peptide F19
Authors:Kong, X.D, Pojer, F, Heinis, C.
Deposit date:2020-01-13
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:De novo development of proteolytically resistant therapeutic peptides for oral administration.
Nat Biomed Eng, 4, 2020
6TWC
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BU of 6twc by Molmil
Crystal Structure of the Catalytic Domain of the Coagulation Factor XIa in Complex with Double Bridged Peptide F21
Descriptor: ACETONE, Coagulation factor XI, Double Bridged Peptide F21
Authors:Kong, X.D, Pojer, F, Heinis, C.
Deposit date:2020-01-13
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:De novo development of proteolytically resistant therapeutic peptides for oral administration.
Nat Biomed Eng, 4, 2020
4XXX
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BU of 4xxx by Molmil
Structure of PE-PPE domains of ESX-1 secreted protein EspB, C2221
Descriptor: CHLORIDE ION, ESX-1 secretion-associated protein EspB, GLYCEROL
Authors:Piton, J, Pojer, F, Korotkov, K.V.
Deposit date:2015-01-30
Release date:2015-02-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of EspB, a secreted substrate of the ESX-1 secretion system of Mycobacterium tuberculosis.
J.Struct.Biol., 191, 2015

 

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