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PDB: 31 results

5TWE
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CTX-M-14 P167S:S70G mutant enzyme crystallized with ceftazidime
Descriptor: ACYLATED CEFTAZIDIME, Beta-lactamase
Authors:Patel, M, Stojanoski, V, Sankaran, B, Prasad, B.V.V, Palzkill, T.
Deposit date:2016-11-12
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Drug-Resistant Variant P167S Expands the Substrate Profile of CTX-M beta-Lactamases for Oxyimino-Cephalosporin Antibiotics by Enlarging the Active Site upon Acylation.
Biochemistry, 56, 2017
6CYQ
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Crystal structure of CTX-M-14 S70G/N106S beta-lactamase in complex with hydrolyzed cefotaxime
Descriptor: (2R)-2-[(R)-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetyl]amino}(carboxy)methyl]-5-methylidene-5,6-dihydro -2H-1,3-thiazine-4-carboxylic acid, Beta-lactamase, GLYCEROL
Authors:Patel, M.P, Hu, L, Sankaran, B, Brown, C, Prasad, B.V.V, Palzkill, T.
Deposit date:2018-04-06
Release date:2018-10-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Synergistic effects of functionally distinct substitutions in beta-lactamase variants shed light on the evolution of bacterial drug resistance.
J. Biol. Chem., 293, 2018
6CYN
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CTX-M-14 N106S/D240G mutant
Descriptor: Beta-lactamase
Authors:Patel, M.P, Hu, L, Sankaran, B, Brown, C, Prasad, B.V.V, Palzkill, T.
Deposit date:2018-04-06
Release date:2018-10-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Synergistic effects of functionally distinct substitutions in beta-lactamase variants shed light on the evolution of bacterial drug resistance.
J. Biol. Chem., 293, 2018
6CYK
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CTX-M-14 N106S mutant
Descriptor: ACETATE ION, Beta-lactamase
Authors:Patel, M.P, Hu, L, Sankaran, B, Brown, C, Prasad, B.V.V, Palzkill, T.
Deposit date:2018-04-06
Release date:2018-10-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synergistic effects of functionally distinct substitutions in beta-lactamase variants shed light on the evolution of bacterial drug resistance.
J. Biol. Chem., 293, 2018
5TWD
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CTX-M-14 P167S apoenzyme
Descriptor: Beta-lactamase
Authors:Patel, M, Stojanoski, V, Sankaran, B, Prasad, B.V.V, Palzkill, T.
Deposit date:2016-11-12
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Drug-Resistant Variant P167S Expands the Substrate Profile of CTX-M beta-Lactamases for Oxyimino-Cephalosporin Antibiotics by Enlarging the Active Site upon Acylation.
Biochemistry, 56, 2017
6CYU
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BU of 6cyu by Molmil
Crystal structure of CTX-M-14 S70G/N106S/D240G beta-lactamase in complex with hydrolyzed cefotaxime
Descriptor: (2R)-2-[(R)-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetyl]amino}(carboxy)methyl]-5-methylidene-5,6-dihydro -2H-1,3-thiazine-4-carboxylic acid, Beta-lactamase
Authors:Patel, M.P, Hu, L, Sankaran, B, Brown, C, Prasad, B.V.V, Palzkill, T.
Deposit date:2018-04-06
Release date:2018-10-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Synergistic effects of functionally distinct substitutions in beta-lactamase variants shed light on the evolution of bacterial drug resistance.
J. Biol. Chem., 293, 2018
5TW6
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BU of 5tw6 by Molmil
CTX-M-14 P167S:E166A mutant with acylated ceftazidime molecule
Descriptor: 1,2-ETHANEDIOL, ACYLATED CEFTAZIDIME, Beta-lactamase
Authors:Patel, M, Stojanoski, V, Sankaran, B, Prasad, B.V.V, Palzkill, T.
Deposit date:2016-11-11
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Drug-Resistant Variant P167S Expands the Substrate Profile of CTX-M beta-Lactamases for Oxyimino-Cephalosporin Antibiotics by Enlarging the Active Site upon Acylation.
Biochemistry, 56, 2017
5U53
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CTX-M-14 E166A with acylated ceftazidime molecule
Descriptor: ACYLATED CEFTAZIDIME, Beta-lactamase, NITRATE ION
Authors:Patel, M, Stojanoski, V, Sankaran, B, Prasad, B.V.V, Palzkill, T.
Deposit date:2016-12-06
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Drug-Resistant Variant P167S Expands the Substrate Profile of CTX-M beta-Lactamases for Oxyimino-Cephalosporin Antibiotics by Enlarging the Active Site upon Acylation.
Biochemistry, 56, 2017
2L1J
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BU of 2l1j by Molmil
1H assignments for ASIP(93-126, P103A, P105A, P111A, Q115Y, S124Y)
Descriptor: Agouti-signaling protein
Authors:Patel, M.P, Cribb Fabersunne, C.S, Yang, Y, Kaelin, C.B, Barsh, G.S, Millhauser, G.L.
Deposit date:2010-07-28
Release date:2010-09-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Loop-swapped chimeras of the agouti-related protein and the agouti signaling protein identify contacts required for melanocortin 1 receptor selectivity and antagonism.
J.Mol.Biol., 404, 2010
2KZA
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BU of 2kza by Molmil
Solution structure of ASIP(80-132, P103A, P105A, Q115Y, S124Y)
Descriptor: Agouti-signaling protein
Authors:Patel, M.P, Cribb Fabersunne, C.S, Yang, Y, Kaelin, C.B, Barsh, G.S, Millhauser, G.L.
Deposit date:2010-06-14
Release date:2010-07-21
Last modified:2020-02-05
Method:SOLUTION NMR
Cite:Loop-swapped chimeras of the agouti-related protein and the agouti signaling protein identify contacts required for melanocortin 1 receptor selectivity and antagonism.
J.Mol.Biol., 404, 2010
7EWO
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BU of 7ewo by Molmil
Crystal Structure of D67A, E68P double mutant of O-acetyl-L-serine sulfhydrylase from Haemophilus influenzae
Descriptor: Cysteine synthase
Authors:Rahisuddin, R, Ekka, M.K, Singh, A.K, Saini, N, Patel, M, Kumar, N, Kumaran, S.
Deposit date:2021-05-25
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of D67A, E68P double mutant of O-acetyl-L-serine sulfhydrylase from Haemophilus influenzae
To Be Published
3IOX
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BU of 3iox by Molmil
Crystal Structure of A3VP1 of AgI/II of Streptococcus mutans
Descriptor: AgI/II, CALCIUM ION, SULFITE ION, ...
Authors:Larson, M.R, Rajashankar, K.R, Patel, M, Robinette, R, Crowley, P, Michalek, S.M, Brady, L.J, Deivanayagam, C.C.
Deposit date:2009-08-14
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Elongated fibrillar structure of a streptococcal adhesin assembled by the high-affinity association of alpha- and PPII-helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
3IPK
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BU of 3ipk by Molmil
Crystal Structure of A3VP1 of AgI/II of Streptococcus mutans
Descriptor: AgI/II, CALCIUM ION, SULFATE ION, ...
Authors:Larson, M.R, Rajashankar, K.R, Patel, M, Robinette, R, Crowley, P, Michalek, S.M, Brady, L.J, Deivanayagam, C.C.
Deposit date:2009-08-17
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Elongated fibrillar structure of a streptococcal adhesin assembled by the high-affinity association of alpha- and PPII-helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
1NI4
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BU of 1ni4 by Molmil
HUMAN PYRUVATE DEHYDROGENASE
Descriptor: MAGNESIUM ION, POTASSIUM ION, Pyruvate dehydrogenase E1 component: Alpha subunit, ...
Authors:Ciszak, E, Korotchkina, L.G, Dominiak, P.M, Sidhu, S, Patel, M.S.
Deposit date:2002-12-20
Release date:2003-06-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis for Flip-Flop Action of Thiamin Pyrophosphate-Dependent Enzymes Revealed by Human Pyruvate Dehydrogenase
J.Biol.Chem., 278, 2003
5VTH
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BU of 5vth by Molmil
CTX-M-14 P167S:E166A mutant
Descriptor: Beta-lactamase
Authors:Hu, L, Patel, M, Sankaran, B, Prasad, B.V.V, Palzkill, T.
Deposit date:2017-05-17
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Drug-Resistant Variant P167S Expands the Substrate Profile of CTX-M beta-Lactamases for Oxyimino-Cephalosporin Antibiotics by Enlarging the Active Site upon Acylation.
Biochemistry, 56, 2017
1D9E
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BU of 1d9e by Molmil
STRUCTURE OF E. COLI KDO8P SYNTHASE
Descriptor: 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE SYNTHASE, SULFATE ION
Authors:Radaev, S, Dastidar, P, Patel, M, Woodard, R.W, Gatti, D.L.
Deposit date:1999-10-27
Release date:2000-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and mechanism of 3-deoxy-D-manno-octulosonate 8-phosphate synthase.
J.Biol.Chem., 275, 2000
1ZY8
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BU of 1zy8 by Molmil
The crystal structure of dihydrolipoamide dehydrogenase and dihydrolipoamide dehydrogenase-binding protein (didomain) subcomplex of human pyruvate dehydrogenase complex.
Descriptor: Dihydrolipoyl dehydrogenase, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Ciszak, E.M, Makal, A, Hong, Y.S, Vettaikkorumakankauv, A.K, Korotchkina, L.G, Patel, M.S.
Deposit date:2005-06-09
Release date:2005-11-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:How Dihydrolipoamide Dehydrogenase-binding Protein Binds Dihydrolipoamide Dehydrogenase in the Human Pyruvate Dehydrogenase Complex.
J.Biol.Chem., 281, 2006
3OAZ
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BU of 3oaz by Molmil
A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity
Descriptor: CHLORIDE ION, Fab 2G12, heavy chain, ...
Authors:Doores, K.J, Fulton, Z, Hong, V, Patel, M.K, Scanlan, C.N, Wormald, M.R, Finn, M.G, Burton, D.R, Wilson, I.A, Davis, B.G.
Deposit date:2010-08-06
Release date:2011-01-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A nonself sugar mimic of the HIV glycan shield shows enhanced antigenicity.
Proc.Natl.Acad.Sci.USA, 107, 2010
1TXT
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BU of 1txt by Molmil
Staphylococcus aureus 3-hydroxy-3-methylglutaryl-CoA synthase
Descriptor: 3-hydroxy-3-methylglutaryl-CoA synthase, ACETOACETYL-COENZYME A
Authors:Campobasso, N, Patel, M, Wilding, I.E, Kallender, H, Rosenberg, M, Gwynn, M.
Deposit date:2004-07-06
Release date:2004-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Staphylococcus aureus 3-hydroxy-3-methylglutaryl-CoA synthase: crystal structure and mechanism
J.Biol.Chem., 279, 2004
3OAY
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BU of 3oay by Molmil
A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity
Descriptor: Fab 2G12, heavy chain, light chain, ...
Authors:Doores, K.J, Fulton, Z, Hong, V, Patel, M.K, Scanlan, C.N, Wormald, M.R, Finn, M.G, Burton, D.R, Wilson, I.A, Davis, B.G.
Deposit date:2010-08-05
Release date:2011-01-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A nonself sugar mimic of the HIV glycan shield shows enhanced antigenicity.
Proc.Natl.Acad.Sci.USA, 107, 2010
1TVZ
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BU of 1tvz by Molmil
Crystal structure of 3-hydroxy-3-methylglutaryl-coenzyme A synthase from Staphylococcus aureus
Descriptor: 3-hydroxy-3-methylglutaryl-CoA synthase, SULFATE ION
Authors:Campobasso, N, Patel, M, Wilding, I.E, Kallender, H, Rosenberg, M, Gwynn, M.
Deposit date:2004-06-30
Release date:2004-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Staphylococcus aureus 3-hydroxy-3-methylglutaryl-CoA synthase: crystal structure and mechanism
J.Biol.Chem., 279, 2004
3L4C
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BU of 3l4c by Molmil
Structural basis of membrane-targeting by Dock180
Descriptor: BETA-MERCAPTOETHANOL, Dedicator of cytokinesis protein 1
Authors:Premkumar, L, Bobkov, A.A, Patel, M, Jaroszewski, L, Bankston, L.A, Stec, B, Vuori, K, Cote, J.-F, Liddington, R.C.
Deposit date:2009-12-18
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structural basis of membrane targeting by the Dock180 family of Rho family guanine exchange factors (Rho-GEFs).
J.Biol.Chem., 285, 2010
6DCG
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BU of 6dcg by Molmil
Discovery of MK-8353: An Orally Bioavailable Dual Mechanism ERK Inhibitor for Oncology
Descriptor: (3S)-3-(methylsulfanyl)-1-(2-{4-[4-(1-methyl-1H-1,2,4-triazol-3-yl)phenyl]-3,6-dihydropyridin-1(2H)-yl}-2-oxoethyl)-N-(3-{6-[(propan-2-yl)oxy]pyridin-3-yl}-1H-indazol-5-yl)pyrrolidine-3-carboxamide, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Boga, S.B, Deng, Y, Zhu, L, Nan, Y, Cooper, A, Shipps Jr, G.W, Doll, R, Shih, N, Zhu, H, Sun, R, Wang, T, Paliwal, S, Tsui, H, Gao, X, Yao, X, Desai, J, Wang, J, Alhassan, A.B, Kelly, J, Patel, M, Muppalla, K, Gudipati, S, Zhang, L, Buevich, A, Hesk, D, Carr, D, Dayananth, P, Mei, H, Cox, K, Sherborne, B, Hruza, A.W, Xiao, L, Jin, W, Long, B, Liu, G, Taylor, S.A, Kirschmeier, P, Windsor, W.T, Bishop, R, Samatar, A.A.
Deposit date:2018-05-06
Release date:2018-08-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:MK-8353: Discovery of an Orally Bioavailable Dual Mechanism ERK Inhibitor for Oncology.
ACS Med Chem Lett, 9, 2018
2VSZ
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BU of 2vsz by Molmil
Crystal Structure of the ELMO1 PH domain
Descriptor: ENGULFMENT AND CELL MOTILITY PROTEIN 1
Authors:Komander, D, Patel, M, Barford, D, Cote, J.-F.
Deposit date:2008-05-01
Release date:2009-03-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An Alpha-Helical Extension of the Elmo1 Pleckstrin Homology Domain Mediates Direct Interaction to Dock180 and is Critical in Rac Signaling.
Molecular Biology of the Cell, 19, 2008
2K7J
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BU of 2k7j by Molmil
Human Acylphosphatase(AcPh) surface charge-optimized
Descriptor: Acylphosphatase-1
Authors:Gribenko, A.V, Patel, M.M, Liu, J, McCallum, S.A, Wang, C, Makhatadze, G.I.
Deposit date:2008-08-12
Release date:2009-02-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Rational stabilization of enzymes by computational redesign of surface charge-charge interactions
Proc.Natl.Acad.Sci.USA, 106, 2009

 

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