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PDB: 64 results

2I37
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BU of 2i37 by Molmil
Crystal structure of a photoactivated rhodopsin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Rhodopsin, ...
Authors:Lodowski, D.T, Stenkamp, R.E, Salom, D, Le Trong, I, Palczewski, K.
Deposit date:2006-08-17
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (4.15 Å)
Cite:Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I35
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BU of 2i35 by Molmil
Crystal structure of rhombohedral crystal form of ground-state rhodopsin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, RETINAL, ...
Authors:Stenkamp, R.E, Le Trong, I, Lodowski, D.T, Salom, D, Palczewski, K.
Deposit date:2006-08-17
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I36
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BU of 2i36 by Molmil
Crystal structure of trigonal crystal form of ground-state rhodopsin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, Rhodopsin, ...
Authors:Stenkamp, R.E, Le Trong, I, Lodowski, D.T, Salom, D, Palczewski, K.
Deposit date:2006-08-17
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5TE3
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BU of 5te3 by Molmil
Crystal structure of Bos taurus opsin at 2.7 Angstrom
Descriptor: PALMITIC ACID, Rhodopsin, SULFATE ION, ...
Authors:Gulati, S, Kiser, P.D, Palczewski, K.
Deposit date:2016-09-20
Release date:2017-03-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Photocyclic behavior of rhodopsin induced by an atypical isomerization mechanism.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4Q95
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BU of 4q95 by Molmil
Crystal structure of HRASLS3/LRAT chimeric protein
Descriptor: HEPTANOIC ACID, HRAS-like suppressor 3, Lecithin retinol acyltransferase
Authors:Golczak, M, Kiser, P.D, Sears, A.E, Palczewski, K.
Deposit date:2014-04-29
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:LRAT-specific domain facilitates vitamin A metabolism by domain swapping in HRASLS3.
Nat.Chem.Biol., 11, 2015
7JTB
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BU of 7jtb by Molmil
CRYSTAL STRUCTURE OF NATIVE BOVINE ARRESTIN 1 IN COMPLEX WITH INOSITOL HEXAKISPHOSPHATE
Descriptor: INOSITOL HEXAKISPHOSPHATE, S-arrestin
Authors:Sander, C.L, Palczewski, K, Kiser, P.D.
Deposit date:2020-08-17
Release date:2021-10-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural evidence for visual arrestin priming via complexation of phosphoinositols.
Structure, 30, 2022
7JSM
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BU of 7jsm by Molmil
CRYSTAL STRUCTURE OF NATIVE BOVINE ARRESTIN 1
Descriptor: S-arrestin
Authors:Sander, C.L, Palczewski, K, Kiser, P.D.
Deposit date:2020-08-14
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural evidence for visual arrestin priming via complexation of phosphoinositols.
Structure, 30, 2022
7JXA
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BU of 7jxa by Molmil
CRYSTAL STRUCTURE OF NATIVE BOVINE ARRESTIN 1 IN COMPLEX WITH INOSITOL 1,4,5-TRIPHOSPHATE
Descriptor: 2-ETHOXYETHANOL, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, S-arrestin, ...
Authors:Sander, C.L, Palczewski, K, Kiser, P.D.
Deposit date:2020-08-26
Release date:2021-10-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural evidence for visual arrestin priming via complexation of phosphoinositols.
Structure, 30, 2022
4Q2R
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BU of 4q2r by Molmil
Structural Proteomics From Crude Native Rod Outer Segments
Descriptor: Creatine kinase B-type, SULFATE ION
Authors:Baker, B.Y, Shi, W, Palczewski, K.
Deposit date:2014-04-09
Release date:2014-09-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Proteomics From Crude Native Rod Outer Segments
To be Published
4O59
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BU of 4o59 by Molmil
Co-enzyme Induced Conformational Changes in Bovine Eye Glyceraldehyde 3-Phosphate Dehydrogenase
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Baker, B.Y, Shi, W, Wang, B, Palczewski, K.
Deposit date:2013-12-19
Release date:2014-09-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:High-resolution crystal structures of the photoreceptor glyceraldehyde 3-phosphate dehydrogenase (GAPDH) with three and four-bound NAD molecules.
Protein Sci., 23, 2014
4OU9
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BU of 4ou9 by Molmil
Crystal structure of apocarotenoid oxygenase in the presence of Triton X-100
Descriptor: Apocarotenoid-15,15'-oxygenase, CHLORIDE ION, FE (II) ION
Authors:Sui, X, Palczewski, K, Kiser, P.D.
Deposit date:2014-02-15
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Analysis of Carotenoid Isomerase Activity in a Prototypical Carotenoid Cleavage Enzyme, Apocarotenoid Oxygenase (ACO).
J.Biol.Chem., 289, 2014
4RYX
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BU of 4ryx by Molmil
Crystal structure of RPE65 in complex with emixustat and palmitate, P6522 crystal form
Descriptor: (1R)-3-amino-1-[3-(cyclohexylmethoxy)phenyl]propan-1-ol, (4S)-2-METHYL-2,4-PENTANEDIOL, FE (II) ION, ...
Authors:Kiser, P.D, Palczewski, K.
Deposit date:2014-12-17
Release date:2015-05-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular pharmacodynamics of emixustat in protection against retinal degeneration.
J.Clin.Invest., 125, 2015
4RSE
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BU of 4rse by Molmil
Crystal structure of RPE65 in complex with MB-001 and palmitate
Descriptor: (1R)-3-amino-1-{3-[(2,6,6-trimethylcyclohex-1-en-1-yl)methoxy]phenyl}propan-1-ol, FE (II) ION, PALMITIC ACID, ...
Authors:Kiser, P.D, Shi, W, Palczewski, K.
Deposit date:2014-11-07
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Catalytic mechanism of a retinoid isomerase essential for vertebrate vision.
Nat.Chem.Biol., 11, 2015
4RYY
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BU of 4ryy by Molmil
Crystal structure of RPE65 in complex with R-emixustat and palmitate
Descriptor: (1R)-3-amino-1-[3-(cyclohexylmethoxy)phenyl]propan-1-ol, FE (II) ION, PALMITIC ACID, ...
Authors:Kiser, P.D, Palczewski, K.
Deposit date:2014-12-17
Release date:2015-05-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular pharmacodynamics of emixustat in protection against retinal degeneration.
J.Clin.Invest., 125, 2015
4O63
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BU of 4o63 by Molmil
Co-enzyme Induced Conformational Changes in Bovine Eye Glyceraldehyde 3-Phosphate Dehydrogenase
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Baker, B.Y, Shi, W, Wang, B, Palczewski, K.
Deposit date:2013-12-20
Release date:2014-09-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:High-resolution crystal structures of the photoreceptor glyceraldehyde 3-phosphate dehydrogenase (GAPDH) with three and four-bound NAD molecules.
Protein Sci., 23, 2014
4RYZ
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BU of 4ryz by Molmil
Crystal structure of RPE65 in complex with S-emixustat and palmitate
Descriptor: (1S)-3-amino-1-[3-(cyclohexylmethoxy)phenyl]propan-1-ol, FE (II) ION, PALMITIC ACID, ...
Authors:Kiser, P.D, Palczewski, K.
Deposit date:2014-12-17
Release date:2015-05-27
Last modified:2021-07-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular pharmacodynamics of emixustat in protection against retinal degeneration.
J.Clin.Invest., 125, 2015
7MOR
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BU of 7mor by Molmil
CRYSTAL STRUCTURE OF NATIVE BOVINE ARRESTIN 1 IN COMPLEX WITH 5-METHYLENEBIPHOSPHONATE INOSITOL PENTAKISPHAOPHATE (5-PCP IP5)
Descriptor: Methylenebisphosphonate inositol pentakisphosphate, S-arrestin
Authors:Sander, C.L, Palczewski, K, Kiser, P.D.
Deposit date:2021-05-03
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural evidence for visual arrestin priming via complexation of phosphoinositols.
Structure, 30, 2022
4RSC
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BU of 4rsc by Molmil
Crystal structure of RPE65 in complex with emixustat and palmitate
Descriptor: (1R)-3-amino-1-[3-(cyclohexylmethoxy)phenyl]propan-1-ol, FE (II) ION, PALMITIC ACID, ...
Authors:Kiser, P.D, Shi, W, Palczewski, K.
Deposit date:2014-11-07
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic mechanism of a retinoid isomerase essential for vertebrate vision.
Nat.Chem.Biol., 11, 2015
7MP2
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BU of 7mp2 by Molmil
CRYSTAL STRUCTURE OF NATIVE BOVINE ARRESTIN 1 IN COMPLEX WITH 1D-MYO-INOSITOL 1,5-BISDIPHOSPHATE TETRAKISPHOSPHATE (1,5-PP IP4)
Descriptor: (1R,3S,4R,5S,6R)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl bis[trihydrogen (diphosphate)], S-arrestin
Authors:Sander, C.L, Palczewski, K, Kiser, P.D.
Deposit date:2021-05-04
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural evidence for visual arrestin priming via complexation of phosphoinositols.
Structure, 30, 2022
7MP0
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BU of 7mp0 by Molmil
CRYSTAL STRUCTURE OF NATIVE BOVINE ARRESTIN 1 IN COMPLEX WITH 1D-MYO-INOSITOL 5-DIPHOSPHATE PENTAKISPHOSPHATE (5-PP IP5)
Descriptor: (1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, 2-ETHOXYETHANOL, S-arrestin
Authors:Sander, C.L, Palczewski, K, Kiser, P.D.
Deposit date:2021-05-04
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural evidence for visual arrestin priming via complexation of phosphoinositols.
Structure, 30, 2022
7MP1
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BU of 7mp1 by Molmil
CRYSTAL STRUCTURE OF NATIVE BOVINE ARRESTIN 1 IN COMPLEX WITH 1,5-DI-METHYLENEBISPHOSPHONATE INOSITOL TETRAKISPHOSPHATE (1,5-PCP-IP4)
Descriptor: S-arrestin, {[(1R,3S,4S,5R,6S)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl]bis[oxy(hydroxyphosphoryl)methanediyl]}bis(phosphonic acid)
Authors:Sander, C.L, Palczewski, K, Kiser, P.D.
Deposit date:2021-05-04
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structural evidence for visual arrestin priming via complexation of phosphoinositols.
Structure, 30, 2022
4OU8
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BU of 4ou8 by Molmil
Crystal structure of apocarotenoid oxygenase in the presence of C8E6
Descriptor: Apocarotenoid-15,15'-oxygenase, CHLORIDE ION, FE (II) ION
Authors:Sui, X, Shi, W, Palczewski, K, Kiser, P.D.
Deposit date:2014-02-15
Release date:2014-03-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of Carotenoid Isomerase Activity in a Prototypical Carotenoid Cleavage Enzyme, Apocarotenoid Oxygenase (ACO).
J.Biol.Chem., 289, 2014
4NN0
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BU of 4nn0 by Molmil
Crystal structure of the C1QTNF5 globular domain in space group P63
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Complement C1q tumor necrosis factor-related protein 5, ...
Authors:Tu, X, Palczewski, K.
Deposit date:2013-11-15
Release date:2014-03-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:The macular degeneration-linked C1QTNF5 (S163) mutation causes higher-order structural rearrangements.
J.Struct.Biol., 186, 2014
5U90
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BU of 5u90 by Molmil
Crystal structure of Co-CAO1 in complex with resveratrol
Descriptor: COBALT (II) ION, Carotenoid oxygenase 1, DIMETHYL SULFOXIDE, ...
Authors:Sui, X, Palczewski, k, Banerjee, S, Kiser, P.D.
Deposit date:2016-12-15
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Spectroscopy of Alkene-Cleaving Dioxygenases Containing an Atypically Coordinated Non-Heme Iron Center.
Biochemistry, 56, 2017
5U8X
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BU of 5u8x by Molmil
Crystal structure of Fe-CAO1
Descriptor: BENZOIC ACID, CHLORIDE ION, Carotenoid oxygenase 1, ...
Authors:Sui, X, Palczewski, K, Banerjee, S, Kiser, P.D.
Deposit date:2016-12-15
Release date:2017-05-31
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.165 Å)
Cite:Structure and Spectroscopy of Alkene-Cleaving Dioxygenases Containing an Atypically Coordinated Non-Heme Iron Center.
Biochemistry, 56, 2017

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