2I35

Crystal structure of rhombohedral crystal form of ground-state rhodopsin

Summary for 2I35

Related2I36 2I37
DescriptorRhodopsin, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ... (5 entities in total)
Functional Keywordstrans-membrane protein, membrane protein
Biological sourceBos taurus (cattle)
Cellular locationMembrane; Multi-pass membrane protein P02699
Total number of polymer chains1
Total molecular weight40919.76
Authors
Stenkamp, R.E.,Le Trong, I.,Lodowski, D.T.,Salom, D.,Palczewski, K. (deposition date: 2006-08-17, release date: 2006-10-17, Last modification date: 2017-10-18)
Primary citation
Salom, D.,Lodowski, D.T.,Stenkamp, R.E.,Trong, I.L.,Golczak, M.,Jastrzebska, B.,Harris, T.,Ballesteros, J.A.,Palczewski, K.
Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.
Proc.Natl.Acad.Sci.Usa, 103:16123-16128, 2006
PubMed: 17060607 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.0608022103
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3.8 Å)
NMR Information
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.435233.4%9.0%9.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2i35
no rotation
Molmil generated image of 2i35
rotated about x axis by 90°
Molmil generated image of 2i35
rotated about y axis by 90°