Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45910 results

3KRF
DownloadVisualize
BU of 3krf by Molmil
Mint heterotetrameric geranyl pyrophosphate synthase in complex with magnesium, IPP, and DMASPP (I)
Descriptor: 1,2-ETHANEDIOL, 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, DIMETHYLALLYL S-THIOLODIPHOSPHATE, ...
Authors:Chang, T.-H, Hsieh, F.-L, Ko, T.-P, Wang, A.H.-J.
Deposit date:2009-11-18
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a heterotetrameric geranyl pyrophosphate synthase from mint (Mentha piperita) reveals intersubunit regulation
Plant Cell, 22, 2010
7QU6
DownloadVisualize
BU of 7qu6 by Molmil
Crystal structure of the N-terminal domain of Siglec-8
Descriptor: Sialic acid-binding Ig-like lectin 8
Authors:Lenza, M.P, Atxabal, U, Nycholat, C.M, Oyenarte, I, Paulson, J.C, Franconetti, A, Quintana, J.I, Unione, L, Delgado, S, Jimenez-Barbero, J, Ereno-Orbea, J.
Deposit date:2022-01-17
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structures of the Inhibitory Receptor Siglec-8 in Complex with a High-Affinity Sialoside Analogue and a Therapeutic Antibody.
Jacs Au, 3, 2023
7O2K
DownloadVisualize
BU of 7o2k by Molmil
NMR solution structue of cytotoxin 2 from Naja Kaouthia
Descriptor: Cytotoxin 2
Authors:Dubinnyi, M.A, Dubovskii, P.V.
Deposit date:2021-03-30
Release date:2021-06-02
Method:SOLUTION NMR
Cite:The omega-loop of cobra cytotoxins tolerates multiple amino acid substitutions.
Biochem.Biophys.Res.Commun., 558, 2021
4BQU
DownloadVisualize
BU of 4bqu by Molmil
Japanin from Rhipicephalus appendiculatus bound to cholesterol: Orthorhombic crystal form
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Roversi, P, Johnson, S, Preston, S, Austyn, J.M, Nuttall, P, Lea, S.M.
Deposit date:2013-06-02
Release date:2014-06-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural basis of cholesterol binding by a novel clade of dendritic cell modulators from ticks.
Sci Rep, 7, 2017
6BN7
DownloadVisualize
BU of 6bn7 by Molmil
Crystal structure of DDB1-CRBN-BRD4(BD1) complex bound to dBET23 PROTAC.
Descriptor: Bromodomain-containing protein 4, DNA damage-binding protein 1, Protein cereblon, ...
Authors:Nowak, R.P, DeAngelo, S.L, Buckley, D, Bradner, J.E, Fischer, E.S.
Deposit date:2017-11-16
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.501 Å)
Cite:Plasticity in binding confers selectivity in ligand-induced protein degradation.
Nat. Chem. Biol., 14, 2018
7QSC
DownloadVisualize
BU of 7qsc by Molmil
GTPase IN COMPLEX WITH GDP.MGF3-
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rho GTPase-activating protein 1, ...
Authors:Baumann, P, Jin, Y.
Deposit date:2022-01-13
Release date:2023-01-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:GTPase IN COMPLEX WITH GDP.MGF3-
To Be Published
7QTM
DownloadVisualize
BU of 7qtm by Molmil
Transition state analogue of small G protein in complex with relevant GAP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rho GTPase-activating protein 1, ...
Authors:Baumann, P, Jin, Y.
Deposit date:2022-01-14
Release date:2023-01-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Transition state analogue of small G protein in complex with relevant GAP
To Be Published
6MTU
DownloadVisualize
BU of 6mtu by Molmil
Crystal structure of human Scribble PDZ1:pMCC complex
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Colorectal mutant cancer protein, ...
Authors:Caria, S, Stewart, B.Z, Humbert, P.O, Kvansakul, M.
Deposit date:2018-10-22
Release date:2019-08-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.141 Å)
Cite:Structural analysis of phosphorylation-associated interactions of human MCC with Scribble PDZ domains.
Febs J., 286, 2019
4LKV
DownloadVisualize
BU of 4lkv by Molmil
Determinants of lipid substrate and membrane binding for the tetraacyldisaccharide-1-phosphate 4 -kinase LpxK
Descriptor: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, 2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-4-O-phosphono-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Emptage, R.P, Tonthat, N.K, York, J.D, Schumacher, M.A, Zhou, P.
Deposit date:2013-07-08
Release date:2014-07-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5109 Å)
Cite:Structural Basis of Lipid Binding for the Membrane-embedded Tetraacyldisaccharide-1-phosphate 4'-Kinase LpxK.
J.Biol.Chem., 289, 2014
6GYJ
DownloadVisualize
BU of 6gyj by Molmil
Mouse thymidylate synthase crystal soaked in phenolphthalein
Descriptor: 3,3-bis(4-hydroxyphenyl)-2-benzofuran-1-one, DIMETHYL SULFOXIDE, SULFATE ION, ...
Authors:Maj, P, Jarmula, A, Wilk, P, Weiss, M.S, Rode, W.
Deposit date:2018-06-30
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Thymidylate synthase fragment screening
To be published
7OJ8
DownloadVisualize
BU of 7oj8 by Molmil
ABCG2 E1S turnover-2 state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Broad substrate specificity ATP-binding cassette transporter ABCG2, CHOLESTEROL, ...
Authors:Ni, D, Yu, Q, Kowal, J, Manolaridis, I, Jackson, S.M, Stahlberg, H, Locher, K.P.
Deposit date:2021-05-14
Release date:2021-07-21
Last modified:2021-07-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of ABCG2 under turnover conditions reveal a key step in the drug transport mechanism.
Nat Commun, 12, 2021
6YZN
DownloadVisualize
BU of 6yzn by Molmil
Closo-carborane butyl-sulfonamide in complex with CA IX mimic
Descriptor: Carbonic anhydrase 2, Carborane closo-butyl-sulfonamide, ZINC ION
Authors:Kugler, M, Brynda, J, Pospisilova, K, Rezacova, P.
Deposit date:2020-05-07
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:The structural basis for the selectivity of sulfonamido dicarbaboranes toward cancer-associated carbonic anhydrase IX.
J Enzyme Inhib Med Chem, 35, 2020
6YZT
DownloadVisualize
BU of 6yzt by Molmil
Closo-carborane propyl-sulfonamide in complex with CA II
Descriptor: Carbonic anhydrase 2, Carborane propyl-sulfonamide, ZINC ION
Authors:Kugler, M, Brynda, J, Pospisilova, K, Rezacova, P.
Deposit date:2020-05-07
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:The structural basis for the selectivity of sulfonamido dicarbaboranes toward cancer-associated carbonic anhydrase IX.
J Enzyme Inhib Med Chem, 35, 2020
6Z04
DownloadVisualize
BU of 6z04 by Molmil
Nido-carborane butyl-sulfonamide in complex with CA IX mimic
Descriptor: Carbonic anhydrase 2, Carborane nido-butyl-sulfonamide, ZINC ION
Authors:Kugler, M, Brynda, J, Pospisilova, K, Rezacova, P.
Deposit date:2020-05-07
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:The structural basis for the selectivity of sulfonamido dicarbaboranes toward cancer-associated carbonic anhydrase IX.
J Enzyme Inhib Med Chem, 35, 2020
2JJR
DownloadVisualize
BU of 2jjr by Molmil
V232K, N236D-trichosanthin
Descriptor: DI(HYDROXYETHYL)ETHER, RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN, SULFATE ION, ...
Authors:Too, P.H, Ma, M.K, Mak, A.N, Tung, C.K, Zhu, G, Au, S.W, Wong, K.B, Shaw, P.C.
Deposit date:2008-04-21
Release date:2008-12-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The C-Terminal Fragment of the Ribosomal P Protein Complexed to Trichosanthin Reveals the Interaction between the Ribosome-Inactivating Protein and the Ribosome.
Nucleic Acids Res., 37, 2009
7WUQ
DownloadVisualize
BU of 7wuq by Molmil
Tethered peptide activation mechanism of adhesion GPCRs ADGRG2 and ADGRG4
Descriptor: Adhesion G-protein coupled receptor G2,mCherry, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:He, Q.T, Guo, S.C, Xiao, P, Sun, J.P, Yu, X, Gou, L, Kong, L.L, Zhang, L.
Deposit date:2022-02-09
Release date:2022-04-27
Last modified:2022-05-11
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Tethered peptide activation mechanism of the adhesion GPCRs ADGRG2 and ADGRG4.
Nature, 604, 2022
6Z28
DownloadVisualize
BU of 6z28 by Molmil
Carboxypeptidase T mutant L254N with N-sulfamoyl-L-glutamic acid
Descriptor: CALCIUM ION, Carboxypeptidase T, N-sulfamoyl-L-glutamic acid, ...
Authors:Timofeev, V.I, Akparov, V.K, Kuranova, I.P.
Deposit date:2020-05-15
Release date:2020-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:CARBOXYPEPTIDASE T MUTANT L254N WITH WITH N-SULFAMOYL-L-GLUT
To Be Published
4C7V
DownloadVisualize
BU of 4c7v by Molmil
Apo Transketolase from Lactobacillus salivarius at 2.2A resolution
Descriptor: TRANSKETOLASE
Authors:Lobley, C.M.C, Lukacik, P, Bumann, M, Aller, P, Douangamath, A, O'Toole, P.W, Walsh, M.A.
Deposit date:2013-09-26
Release date:2014-10-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:High Resolution Crystal Structures of Lactobacillus Salivarius Transketolase in the Presence and Absence of Thiamine Pyrophosphate
Acta Crystallogr.,Sect.F, 71, 2015
1MV8
DownloadVisualize
BU of 1mv8 by Molmil
1.55 A crystal structure of a ternary complex of GDP-mannose dehydrogenase from Psuedomonas aeruginosa
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, GDP-mannose 6-dehydrogenase, ...
Authors:Snook, C.F, Tipton, P.A, Beamer, L.J.
Deposit date:2002-09-24
Release date:2003-05-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The crystal structure of GDP-mannose dehydrogenase: A key enzyme in alginate biosynthesis of P. aeruginosa
Biochemistry, 42, 2003
6BID
DownloadVisualize
BU of 6bid by Molmil
1.15 A resolution structure of Norovirus 3CL protease in complex with a triazole-based macrocyclic inhibitor
Descriptor: 3C-like protease, benzyl [(8S,11S,14S)-11-(cyclohexylmethyl)-8-(hydroxymethyl)-5,10,13-trioxo-1,4,9,12,17,18-hexaazabicyclo[14.2.1]nonadeca-16(19),17-dien-14-yl]carbamate
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Weerawarna, P.M, Rathnayake, A.D, Kim, Y, Chang, K.O, Groutas, W.C.
Deposit date:2017-11-01
Release date:2018-11-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Putative structural rearrangements associated with the interaction of macrocyclic inhibitors with norovirus 3CL protease.
Proteins, 87, 2019
2JLY
DownloadVisualize
BU of 2jly by Molmil
Dengue virus 4 NS3 helicase in complex with ssRNA and ADP-Phosphate
Descriptor: 5'-R(*AP*GP*AP*CP*UP*AP*AP*CP*AP*AP*CP*U)-3', ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Luo, D.H, Xu, T, Watson, R.P, Becker, D.S, Sampath, A, Jahnke, W, Yeong, S.S, Wang, C.H, Lim, S.P, Vasudevan, S.G, Lescar, J.
Deposit date:2008-09-15
Release date:2008-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insights Into RNA Unwinding and ATP Hydrolysis by the Flavivirus Ns3 Protein.
Embo J., 27, 2008
7QUM
DownloadVisualize
BU of 7qum by Molmil
ATAD2 in complex with FragLite2
Descriptor: 1,2-ETHANEDIOL, 4-IODOPYRAZOLE, ATPase family AAA domain-containing protein 2, ...
Authors:Turberville, S, Martin, M.P, Hope, I, Noble, M.E.M.
Deposit date:2022-01-18
Release date:2023-03-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions.
J.Med.Chem., 65, 2022
7QCU
DownloadVisualize
BU of 7qcu by Molmil
Structure of the MUCIN-2 Cterminal domains partially deglycosylated.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mucin-2, ...
Authors:Gallego, P, Hansson, G.C.
Deposit date:2021-11-25
Release date:2023-03-08
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:The intestinal MUC2 mucin C-terminus is stabilized by an extra disulfide bond in comparison to von Willebrand factor and other gel-forming mucins.
Nat Commun, 14, 2023
7QCN
DownloadVisualize
BU of 7qcn by Molmil
Structure of the MUCIN-2 Cterminal domains: vWCN to TIL domains with a C2 symmetry
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mucin-2, ...
Authors:Gallego, P, Hansson, G.C.
Deposit date:2021-11-24
Release date:2023-03-08
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The intestinal MUC2 mucin C-terminus is stabilized by an extra disulfide bond in comparison to von Willebrand factor and other gel-forming mucins.
Nat Commun, 14, 2023
7QYK
DownloadVisualize
BU of 7qyk by Molmil
ATAD2 in complex with FragLite18
Descriptor: (4-bromanylpyridin-2-yl)methanol, 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, ...
Authors:Turberville, S, Martin, M.P, Hope, I, Noble, M.E.M.
Deposit date:2022-01-28
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions.
J.Med.Chem., 65, 2022

223790

건을2024-08-14부터공개중

PDB statisticsPDBj update infoContact PDBjnumon