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PDB: 45955 件

6O26
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Crystal structure of 3246 Fab in complex with circumsporozoite protein NANA
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3246 Fab heavy chain, ...
著者Scally, S.W, Bosch, A, Castro, K, Murugan, R, Wardemann, H, Julien, J.P.
登録日2019-02-22
公開日2020-03-04
最終更新日2020-09-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Evolution of protective human antibodies against Plasmodium falciparum circumsporozoite protein repeat motifs.
Nat. Med., 26, 2020
6O2H
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Hen lysozyme in triclinic space group at ambient temperature - diffuse scattering dataset
分子名称: CHLORIDE ION, Lysozyme C, NITRATE ION
著者Meisburger, S.P, Ando, N.
登録日2019-02-22
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.212 Å)
主引用文献Diffuse X-ray scattering from correlated motions in a protein crystal.
Nat Commun, 11, 2020
8DQJ
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Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (AST) bound to ATP and acridone
分子名称: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, ADENOSINE MONOPHOSPHATE, ...
著者Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B.
登録日2022-07-19
公開日2022-12-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity.
Acs Chem.Biol., 17, 2022
6W8R
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Crystal structure of metacaspase 4 C139A from Arabidopsis
分子名称: Metacaspase-4, SULFATE ION
著者Zhu, P, Yu, X.H, Wang, C, Zhang, Q, Liu, W, McSweeney, S, Shanklin, J, Lam, E, Liu, Q.
登録日2020-03-21
公開日2020-05-20
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Structural basis for Ca2+-dependent activation of a plant metacaspase.
Nat Commun, 11, 2020
6H0C
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Flv1 flavodiiron core from Synechocystis sp. PCC6803
分子名称: CHLORIDE ION, CITRATE ANION, Putative diflavin flavoprotein A 3
著者Borges, P.T, Romao, C.V, Saraiva, L, Goncalves, V.L, Carrondo, M.A, Teixeira, M, Frazao, C.
登録日2018-07-08
公開日2019-01-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.592 Å)
主引用文献Analysis of a new flavodiiron core structural arrangement in Flv1-Delta FlR protein from Synechocystis sp. PCC6803.
J. Struct. Biol., 205, 2019
6VRY
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Structure of NCI09 fab in complex with SIV V2 peptide
分子名称: NCI09 heavy chain, NCI09 light chain, SIV V2 peptide, ...
著者Gorman, J, Ahmadi, M, Kwong, P.D.
登録日2020-02-10
公開日2020-12-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献HIV vaccine candidate with V1 deletion reveals virus vulnerability to V2 antibodies
Iscience, 2020
1T6H
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BU of 1t6h by Molmil
Crystal Structure T4 Lysozyme incorporating an unnatural amino acid p-iodo-L-phenylalanine at position 153
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme
著者Spraggon, G, Xie, J, Wang, L, Wu, N, Brock, A, Schultz, P.G.
登録日2004-05-06
公開日2004-10-26
最終更新日2018-02-14
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The site-specific incorporation of p-iodo-L-phenylalanine into proteins for structure determination.
Nat.Biotechnol., 22, 2004
3MLT
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Crystal structure of anti-HIV-1 V3 Fab 2557 in complex with a UG1033 V3 peptide
分子名称: HIV-1 gp120 third variable region (V3) crown, Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab heavy chain, Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab light chain
著者Kong, X.-P.
登録日2010-04-18
公開日2010-07-14
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Conserved structural elements in the V3 crown of HIV-1 gp120.
Nat.Struct.Mol.Biol., 17, 2010
6VX5
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bestrophin-2 Ca2+- unbound state (250 nM Ca2+)
分子名称: Bestrophin, CHLORIDE ION
著者Owji, A.P, Zhao, Q, Ji, C, Kittredge, A, Hopiavuori, A, Fu, Z, Ward, N, Clarke, O, Shen, Y, Zhang, Y, Hendrickson, W.A, Yang, T.
登録日2020-02-21
公開日2020-04-08
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Structural and functional characterization of the bestrophin-2 anion channel.
Nat.Struct.Mol.Biol., 27, 2020
2ZJQ
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BU of 2zjq by Molmil
Interaction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunit
分子名称: 50S ribosomal protein L11, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Harms, J.M, Wilson, D.N, Schluenzen, F, Connell, S.R, Stachelhaus, T, Zaborowska, Z, Spahn, C.M.T, Fucini, P.
登録日2008-03-08
公開日2008-06-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Translational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin.
Mol.Cell, 30, 2008
3FOH
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Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 extended tail
分子名称: Tail sheath protein Gp18
著者Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2008-12-30
公開日2009-03-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
6VX6
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bestrophin-2 Ca2+-bound state (250 nM Ca2+)
分子名称: Bestrophin, CALCIUM ION, CHLORIDE ION
著者Owji, A.P, Zhao, Q, Ji, C, Kittredge, A, Hopiavuori, A, Fu, Z, Ward, N, Clarke, O, Shen, Y, Zhang, Y, Hendrickson, W.A, Yang, T.
登録日2020-02-21
公開日2020-04-08
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural and functional characterization of the bestrophin-2 anion channel.
Nat.Struct.Mol.Biol., 27, 2020
6NTP
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PTP1B Domain of PTP1B-LOV2 Chimera
分子名称: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1,NPH1-1
著者Hongdusit, A, Sankaran, B, Zwart, P.H, Fox, J.M.
登録日2019-01-30
公開日2020-01-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Minimally disruptive optical control of protein tyrosine phosphatase 1B.
Nat Commun, 11, 2020
8E3Q
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BU of 8e3q by Molmil
CRYO-EM STRUCTURE OF the human MPSF
分子名称: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, ZINC ION, ...
著者Gutierrez, P.A, Wei, J, Sun, Y, Tong, L.
登録日2022-08-17
公開日2023-01-18
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Molecular basis for the recognition of the AUUAAA polyadenylation signal by mPSF.
Rna, 28, 2022
2FI5
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BU of 2fi5 by Molmil
Crystal structure of a BPTI variant (Cys38->Ser) in complex with trypsin
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Cationic trypsin, ...
著者Zakharova, E, Horvath, M.P, Goldenberg, D.P.
登録日2005-12-27
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Functional and structural roles of the Cys14-Cys38 disulfide of bovine pancreatic trypsin inhibitor.
J.Mol.Biol., 382, 2008
8UC6
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Calpain-7:IST1 Complex
分子名称: Calpain-7, IST1 homolog
著者Paine, E, Whitby, F.G, Hill, C.P, Sunquist, W.I.
登録日2023-09-25
公開日2023-10-25
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献The Calpain-7 protease functions together with the ESCRT-III protein IST1 within the midbody to regulate the timing and completion of abscission.
Elife, 12, 2023
6H45
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crystal structure of the human TGT catalytic subunit QTRT1 in complex with queuine
分子名称: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, BROMIDE ION, CHLORIDE ION, ...
著者Johannsson, S, Neumann, P, Ficner, R.
登録日2018-07-20
公開日2018-09-05
最終更新日2023-03-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the Human tRNA Guanine Transglycosylase Catalytic Subunit QTRT1.
Biomolecules, 8, 2018
8C8G
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BU of 8c8g by Molmil
Cryo-EM structure of BoNT/Wo-NTNH complex
分子名称: Putative botulinum-like toxin Wo, Structural protein
著者Kosenina, S, Skerlova, J, Stenmark, P.
登録日2023-01-20
公開日2023-10-04
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献The cryo-EM structure of the BoNT/Wo-NTNH complex reveals two immunoglobulin-like domains.
Febs J., 291, 2024
4FZG
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20S yeast proteasome in complex with glidobactin
分子名称: Glidobactin, Proteasome component C1, Proteasome component C11, ...
著者Stein, M, Beck, P, Kaiser, M, Dudler, R, Becker, C.F.W, Groll, M.
登録日2012-07-06
公開日2012-10-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献One-shot NMR analysis of microbial secretions identifies highly potent proteasome inhibitor.
Proc.Natl.Acad.Sci.USA, 109, 2012
6JC6
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BU of 6jc6 by Molmil
Crystal structure of the purple chromoprotein of Stichodactyla haddoni with a Glu-Tyr-Gly tri-peptide chromophore
分子名称: shCP
著者Ko, T.P, Huang, K.F, Chang, H.Y.
登録日2019-01-28
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the blue fluorescent protein with a Leu-Leu-Gly tri-peptide chromophore derived from the purple chromoprotein of Stichodactyla haddoni.
Int. J. Biol. Macromol., 130, 2019
3FLP
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Crystal structure of native heptameric SAP-like pentraxin from Limulus polyphemus
分子名称: CALCIUM ION, SAP-like pentraxin
著者Shrive, A.K, Greenhough, T.J, Armstrong, P.B.
登録日2008-12-19
公開日2009-01-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of Limulus SAP-like pentraxin reveal two molecular aggregations.
J.Mol.Biol., 386, 2009
3FMZ
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Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with non-retinoid ligand
分子名称: 2-[({4-[2-(trifluoromethyl)phenyl]piperidin-1-yl}carbonyl)amino]benzoic acid, Retinol-binding protein 4
著者Wang, Z, Johnstone, S, Walker, N.P.
登録日2008-12-22
公開日2009-01-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Identification and Characterization of a Non-retinoid Ligand for Retinol-binding Protein 4 Which Lowers Serum Retinol-binding Protein 4 Levels in Vivo.
J.Biol.Chem., 284, 2009
6UMT
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High-affinity human PD-1 PD-L2 complex
分子名称: MAGNESIUM ION, Programmed cell death 1 ligand 2, Programmed cell death protein 1
著者Tang, S, Kim, P.S.
登録日2019-10-10
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.986 Å)
主引用文献A high-affinity human PD-1/PD-L2 complex informs avenues for small-molecule immune checkpoint drug discovery.
Proc.Natl.Acad.Sci.USA, 116, 2019
3T39
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Crystal structure of the complex of camel peptidoglycan recognition protein(CPGRP-S) with a mycobacterium metabolite shikimate at 2.7 A resolution
分子名称: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, GLYCEROL, Peptidoglycan recognition protein 1, ...
著者Sharma, P, Dube, D, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2011-07-25
公開日2011-08-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the complex of peptidoglycan recognition protein-short (CPGRP-S) with a mycobacterium metabolite shikimate at 2.7 A resolution
To be Published
3OS2
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PFV target capture complex (TCC) at 3.32 A resolution
分子名称: DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*CP*CP*CP*GP*AP*GP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*GP*CP*AP*CP*GP*TP*GP*CP*CP*TP*CP*GP*GP*G)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ...
著者Maertens, G.N, Hare, S, Cherepanov, P.
登録日2010-09-08
公開日2010-11-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.32 Å)
主引用文献The mechanism of retroviral integration from X-ray structures of its key intermediates
Nature, 468, 2010

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件を2024-08-21に公開中

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