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PDB: 45697 results

5FUR
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BU of 5fur by Molmil
Structure of human TFIID-IIA bound to core promoter DNA
Descriptor: SUPER CORE PROMOTER, TATA-BOX-BINDING PROTEIN, TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1, ...
Authors:Louder, R.K, He, Y, Lopez-Blanco, J.R, Fang, J, Chacon, P, Nogales, E.
Deposit date:2016-01-29
Release date:2016-04-06
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:Structure of Promoter-Bound TFIID and Model of Human Pre-Initiation Complex Assembly.
Nature, 531, 2016
8C67
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BU of 8c67 by Molmil
Crystal structure of Ab25 Fab
Descriptor: antibody 25 heavy chain, antibody 25 light chain
Authors:Nyblom, M, Izadi, A, Tang, D, Bahnan, W, Happonen, L, Malmstroem, J, Shannon, O, Malmstroem, L, Nordenfelt, P.
Deposit date:2023-01-11
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Engineering of IgG1 hinge to the flexible IgG3 hinge enhances immune defense against streptococci
To Be Published
7UQT
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BU of 7uqt by Molmil
Solution NMR structure of hexahistidine tagged QseM (6H-QseM)
Descriptor: Quorum sensing master protein
Authors:Hall, D.A, Solomon, P.D, Bond, C.S, Ramsay, J.P, Mackay, J.P.
Deposit date:2022-04-20
Release date:2023-03-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:DUF2285 is a novel helix-turn-helix domain variant that orchestrates both activation and antiactivation of conjugative element transfer in proteobacteria.
Nucleic Acids Res., 51, 2023
7SCT
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BU of 7sct by Molmil
Crystal Structure of the Tick Evasin EVA-AAM1001 Complexed to Human Chemokine CCL16
Descriptor: C-C motif chemokine 16, Evasin P1243
Authors:Devkota, S.R, Bhusal, R.P, Aryal, P, Wilce, M.C.J, Stone, M.J.
Deposit date:2021-09-29
Release date:2023-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Engineering broad-spectrum inhibitors of inflammatory chemokines from subclass A3 tick evasins.
Nat Commun, 14, 2023
8CBW
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BU of 8cbw by Molmil
CryoEM structure of the Hendra henipavirus nucleocapsid sauronoid assembly monomer
Descriptor: Nucleocapsid, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3')
Authors:Passchier, T.C, Maskell, D.P, Edwards, T.A, Barr, J.N.
Deposit date:2023-01-26
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.485 Å)
Cite:The cryoEM structure of the Hendra henipavirus nucleoprotein reveals insights into paramyxoviral nucleocapsid architectures.
Sci Rep, 14, 2024
7S2I
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BU of 7s2i by Molmil
Crystal structure of sulfonamide resistance enzyme Sul1 in complex with 6-hydroxymethylpterin
Descriptor: 6-HYDROXYMETHYLPTERIN, CHLORIDE ION, GLYCEROL, ...
Authors:Stogios, P.J, Skarina, T, Kim, Y, Venkatesan, M, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-09-03
Release date:2023-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Molecular mechanism of plasmid-borne resistance to sulfonamide antibiotics.
Nat Commun, 14, 2023
8C4H
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BU of 8c4h by Molmil
CryoEM structure of the Hendra henipavirus nucleocapsid sauronoid assembly multimer
Descriptor: Nucleocapsid, RNA (84-MER)
Authors:Passchier, T.C, Maskell, D.P, Edwards, T.A, Barr, J.N.
Deposit date:2023-01-04
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.485 Å)
Cite:The cryoEM structure of the Hendra henipavirus nucleoprotein reveals insights into paramyxoviral nucleocapsid architectures.
Sci Rep, 14, 2024
3IAZ
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BU of 3iaz by Molmil
Structural basis of the prevention of NSAID-induced damage of the gastrointestinal tract by C-terminal half (C-lobe) of bovine colostrum protein lactoferrin: Binding and structural studies of the C-lobe complex with aspirin
Descriptor: 2-(ACETYLOXY)BENZOIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, ...
Authors:Mir, R, Singh, N, Sinha, M, Sharma, S, Kaur, P, Srinivasan, A, Singh, T.P.
Deposit date:2009-07-15
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structural basis for the prevention of nonsteroidal antiinflammatory drug-induced gastrointestinal tract damage by the C-lobe of bovine colostrum lactoferrin
Biophys.J., 97, 2009
7S2J
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BU of 7s2j by Molmil
Crystal structure of sulfonamide resistance enzyme Sul2 apoenzyme
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Stogios, P.J, Skarina, T, Michalska, K, Venkatesan, M, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-09-03
Release date:2023-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular mechanism of plasmid-borne resistance to sulfonamide antibiotics.
Nat Commun, 14, 2023
7S2L
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BU of 7s2l by Molmil
Crystal structure of sulfonamide resistance enzyme Sul3 apoenzyme
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Stogios, P.J, Venkatesan, M, Michalska, K, Mesa, N, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-09-03
Release date:2023-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Molecular mechanism of plasmid-borne resistance to sulfonamide antibiotics.
Nat Commun, 14, 2023
7TBQ
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BU of 7tbq by Molmil
LOV2-DARPIN fusion : D7
Descriptor: CHLORIDE ION, D7 LOV2-DARPin fusion, FLAVIN MONONUCLEOTIDE, ...
Authors:Mittl, P.
Deposit date:2021-12-22
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.678 Å)
Cite:LOV2-DARPIN fusion : D7
To Be Published
7AOC
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BU of 7aoc by Molmil
Schizosaccharomyces pombe RNA polymerase I (monomer)
Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit rpa1, DNA-directed RNA polymerase I subunit rpa14, ...
Authors:Heiss, F, Daiss, J, Becker, P, Engel, C.
Deposit date:2020-10-14
Release date:2021-02-24
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Conserved strategies of RNA polymerase I hibernation and activation.
Nat Commun, 12, 2021
8D5H
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BU of 8d5h by Molmil
Crystal structure of dihydropteroate synthase (folP-SMZ_B27) from soil uncultured bacterium in complex with 6-hydroxymethyl-7,8-dihydropterin
Descriptor: 6-HYDROXYMETHYLPTERIN, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Stogios, P.J, Skarina, T, Osipiuk, J, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-06-04
Release date:2022-06-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of dihydropteroate synthase (folP-SMZ_B27) from soil uncultured bacterium in complex with 6-hydroxymethyl-7,8-dihydropterin
To Be Published
7AIA
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BU of 7aia by Molmil
Complex of human GDAP1 with hexadecanedioic acid
Descriptor: ETHANOL, GLYCEROL, Ganglioside-induced differentiation-associated protein 1, ...
Authors:Nguyen, G.T.T, Sutinen, A, Kursula, P.
Deposit date:2020-09-26
Release date:2021-02-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the Complete Dimeric Human GDAP1 Core Domain Provides Insights into Ligand Binding and Clustering of Disease Mutations.
Front Mol Biosci, 7, 2020
5AFI
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BU of 5afi by Molmil
2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fischer, N, Neumann, P, Konevega, A.L, Bock, L.V, Ficner, R, Rodnina, M.V, Stark, H.
Deposit date:2015-01-22
Release date:2015-03-11
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of the E. coli ribosome-EF-Tu complex at <3 angstrom resolution by Cs-corrected cryo-EM.
Nature, 520, 2015
6P2K
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BU of 6p2k by Molmil
Crystal structure of AFV00434, an ancestral GH74 enzyme
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Stogios, P.J, Skarina, T, Arnal, G, Brumer, H, Savchenko, A.
Deposit date:2019-05-21
Release date:2019-07-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74.
J.Biol.Chem., 294, 2019
8P6F
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BU of 8p6f by Molmil
Crystal structure of PorX-Fj
Descriptor: ACETATE ION, MAGNESIUM ION, Response regulator receiver domain-containing protein, ...
Authors:Leone, P.
Deposit date:2023-05-26
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-function analysis of PorX Fj , the PorX homolog from Flavobacterium johnsioniae, suggests a role of the CheY-like domain in type IX secretion motor activity.
Sci Rep, 14, 2024
6F7Y
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BU of 6f7y by Molmil
Crystal structure of dimethylated RSL, cucurbituril-free form
Descriptor: Fucose-binding lectin protein, GLYCEROL
Authors:Guagnini, F, Rennie, M.L, Crowley, P.B.
Deposit date:2017-12-12
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cucurbit[7]uril-Dimethyllysine Recognition in a Model Protein.
Angew. Chem. Int. Ed. Engl., 57, 2018
6V42
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BU of 6v42 by Molmil
Crystal structure of the flavin oxygenase with cofactor bound involved in folate catabolism
Descriptor: FAD/FMN-containing dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Begley, T.P, Adak, S, Zhao, B, Li, P.
Deposit date:2019-11-27
Release date:2020-12-02
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A novel flavoenzyme catalyzed Baeyer-Villiger type rearrangement in bacterial folic acid catabolic pathway
To Be Published
7T39
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BU of 7t39 by Molmil
Co-crystal structure of human PRMT9 in complex with MT221 inhibitor
Descriptor: 7-[5-S-(4-{[(2-ethylpyridin-3-yl)methyl]amino}butyl)-5-thio-beta-D-ribofuranosyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Protein arginine N-methyltransferase 9
Authors:Zeng, H, Dong, A, Hutchinson, A, Seitova, A, Li, Y, Gao, Y.D, Schneider, S, Siliphaivanh, P, Sloman, D, Nicholson, B, Fischer, C, Hicks, J, Brown, P.J, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2021-12-07
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Co-crystal structure of human PRMT9 in complex with MT221 inhibitor
To Be Published
1OJY
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BU of 1ojy by Molmil
Decay accelerating factor (cd55): the structure of an intact human complement regulator.
Descriptor: ACETATE ION, COMPLEMENT DECAY-ACCELERATING FACTOR, GLYCEROL, ...
Authors:Lukacik, P, Roversi, P, White, J, Esser, D, Smith, G.P, Billington, J, Williams, P.A, Rudd, P.M, Wormald, M.R, Crispin, M.D.M, Radcliffe, C.M, Dwek, R.A, Evans, D.J, Morgan, B.P, Smith, R.A.G, Lea, S.M.
Deposit date:2003-07-16
Release date:2004-01-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Complement Regulation at the Molecular Level: The Structure of Decay-Accelerating Factor
Proc.Natl.Acad.Sci.USA, 101, 2004
8P22
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BU of 8p22 by Molmil
X-ray structure of acetylcholine-binding protein (AChBP) in complex with IOTA376.
Descriptor: 2-[(2~{R})-1-ethylimidazolidin-2-yl]-6-pyridin-2-yl-pyridine, Acetylcholine-binding protein, GLYCEROL, ...
Authors:Cederfelt, D, Boronat, P, Dobritzsch, D, Hennig, S, Fitzgerald, E.A, de Esch, I.J.P, Danielson, U.H.
Deposit date:2023-05-14
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Elucidating the regulation of ligand gated ion channels via biophysical studies of ligand-induced conformational dynamics of acetylcholine binding proteins
To Be Published
1OK2
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BU of 1ok2 by Molmil
Decay accelerating factor (CD55): the structure of an intact human complement regulator.
Descriptor: ACETATE ION, COMPLEMENT DECAY-ACCELERATING FACTOR, GLYCEROL, ...
Authors:Lukacik, P, Roversi, P, White, J, Esser, D, Smith, G.P, Billington, J, Williams, P.A, Rudd, P.M, Wormald, M.R, Crispin, M.D.M, Radcliffe, C.M, Dwek, R.A, Evans, D.J, Morgan, B.P, Smith, R.A.G, Lea, S.M.
Deposit date:2003-07-16
Release date:2004-01-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Complement Regulation at the Molecular Level: The Structure of Decay-Accelerating Factor
Proc.Natl.Acad.Sci.USA, 101, 2004
7SX3
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BU of 7sx3 by Molmil
Human NALCN-FAM155A-UNC79-UNC80 channelosome with CaM bound, conformation 1/2
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kschonsak, M, Chua, H.C, Weidling, C, Chakouri, N, Noland, C.L, Schott, K, Chang, T, Tam, C, Patel, N, Arthur, C.P, Leitner, A, Ben-Johny, M, Ciferri, C, Pless, S.A, Payandeh, J.
Deposit date:2021-11-22
Release date:2021-12-29
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural architecture of the human NALCN channelosome.
Nature, 603, 2022
7SZO
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BU of 7szo by Molmil
Structure of a bacterial fimbrial tip containing FocH
Descriptor: Chaperone protein FimC, FimF protein, FimG, ...
Authors:Stenkamp, R.E, Le Trong, I, Aprikian, P, Sokurenko, E.V.
Deposit date:2021-11-29
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Recombinant FimH Adhesin Demonstrates How the Allosteric Catch Bond Mechanism Can Support Fast and Strong Bacterial Attachment in the Absence of Shear.
J.Mol.Biol., 434, 2022

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