6LW1
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![BU of 6lw1 by Molmil](/molmil-images/mine/6lw1) | Cryo-EM structure of TLR7/Cpd-7 (DSR-139970) complex in open form | 分子名称: | 2-ethoxy-8-(5-fluoranylpyridin-3-yl)-6-methyl-9-[[4-[[(1S,4S)-5-methyl-2,5-diazabicyclo[2.2.1]heptan-2-yl]methyl]phenyl]methyl]purine, Toll-like receptor 7 | 著者 | Zhang, Z, Ohto, U, Shimizu, T. | 登録日 | 2020-02-06 | 公開日 | 2020-11-11 | 実験手法 | ELECTRON MICROSCOPY (2.8 Å) | 主引用文献 | Structural analysis reveals TLR7 dynamics underlying antagonism. Nat Commun, 11, 2020
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6LVZ
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![BU of 6lvz by Molmil](/molmil-images/mine/6lvz) | Crystal structure of TLR7/Cpd-3 (SM-394830) complex | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-azanyl-2-(2-methoxyethoxy)-9-(pyridin-3-ylmethyl)-7H-purin-8-one, ... | 著者 | Zhang, Z, Ohto, U, Shimizu, T. | 登録日 | 2020-02-06 | 公開日 | 2020-11-11 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.83 Å) | 主引用文献 | Structural analysis reveals TLR7 dynamics underlying antagonism. Nat Commun, 11, 2020
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6LVX
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![BU of 6lvx by Molmil](/molmil-images/mine/6lvx) | Crystal structure of TLR7/Cpd-1 (SM-374527) complex | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-azanyl-2-butoxy-9-(phenylmethyl)-7H-purin-8-one, ... | 著者 | Zhang, Z, Ohto, U, Shimizu, T. | 登録日 | 2020-02-06 | 公開日 | 2020-11-11 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.77 Å) | 主引用文献 | Structural analysis reveals TLR7 dynamics underlying antagonism. Nat Commun, 11, 2020
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3AK8
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![BU of 3ak8 by Molmil](/molmil-images/mine/3ak8) | Crystal structure of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis | 分子名称: | DNA protection during starvation protein, MAGNESIUM ION, SULFATE ION | 著者 | Miyamoto, T, Asahina, Y, Miyazaki, S, Shimizu, H, Ohto, U, Noguchi, S, Satow, Y. | 登録日 | 2010-07-08 | 公開日 | 2011-01-12 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.25 Å) | 主引用文献 | Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis Acta Crystallogr.,Sect.F, 67, 2011
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3AK9
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![BU of 3ak9 by Molmil](/molmil-images/mine/3ak9) | Crystal structure of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis, FE-soaked form | 分子名称: | DNA protection during starvation protein, FE (II) ION, MAGNESIUM ION, ... | 著者 | Miyamoto, T, Asahina, Y, Miyazaki, S, Shimizu, H, Ohto, U, Noguchi, S, Satow, Y. | 登録日 | 2010-07-08 | 公開日 | 2011-01-12 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis Acta Crystallogr.,Sect.F, 67, 2011
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7WGE
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![BU of 7wge by Molmil](/molmil-images/mine/7wge) | Human NLRP1 complexed with thioredoxin | 分子名称: | MAGNESIUM ION, NACHT, LRR and PYD domains-containing protein 1, ... | 著者 | Zhang, Z, Ohto, U, Shimizu, T. | 登録日 | 2021-12-28 | 公開日 | 2023-07-05 | 最終更新日 | 2023-10-18 | 実験手法 | ELECTRON MICROSCOPY (3.4 Å) | 主引用文献 | Structural basis for thioredoxin-mediated suppression of NLRP1 inflammasome. Nature, 622, 2023
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7WBT
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![BU of 7wbt by Molmil](/molmil-images/mine/7wbt) | Crystal structure of bovine NLRP9 | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, NACHT, LRR and PYD domains-containing protein 9 | 著者 | Kamitsukasa, Y, Shimizu, T, Ohto, U. | 登録日 | 2021-12-17 | 公開日 | 2022-04-06 | 最終更新日 | 2022-04-27 | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | 主引用文献 | The structure of NLRP9 reveals a unique C-terminal region with putative regulatory function. Febs Lett., 596, 2022
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7WBU
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![BU of 7wbu by Molmil](/molmil-images/mine/7wbu) | Cryo-EM structure of bovine NLRP9 | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, NACHT, LRR and PYD domains-containing protein 9 | 著者 | Kamitsukasa, Y, Shimizu, T, Ohto, U. | 登録日 | 2021-12-17 | 公開日 | 2022-04-06 | 最終更新日 | 2024-06-26 | 実験手法 | ELECTRON MICROSCOPY (3.42 Å) | 主引用文献 | The structure of NLRP9 reveals a unique C-terminal region with putative regulatory function. Febs Lett., 596, 2022
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7WSI
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![BU of 7wsi by Molmil](/molmil-images/mine/7wsi) | |
8KCX
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![BU of 8kcx by Molmil](/molmil-images/mine/8kcx) | Cryo-EM structure of human SIDT1 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SID1 transmembrane family member 1, ZINC ION, ... | 著者 | Hirano, Y, Ohto, U, Shimizu, T. | 登録日 | 2023-08-08 | 公開日 | 2024-06-12 | 実験手法 | ELECTRON MICROSCOPY (2.96 Å) | 主引用文献 | Cryo-EM analysis reveals human SID-1 transmembrane family member 1 dynamics underlying lipid hydrolytic activity. Commun Biol, 7, 2024
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8KCW
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![BU of 8kcw by Molmil](/molmil-images/mine/8kcw) | Cryo-EM structure of human SIDT1 bound to cholesterol | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, SID1 transmembrane family member 1, ... | 著者 | Hirano, Y, Ohto, U, Shimizu, T. | 登録日 | 2023-08-08 | 公開日 | 2024-06-12 | 実験手法 | ELECTRON MICROSCOPY (2.77 Å) | 主引用文献 | Cryo-EM analysis reveals human SID-1 transmembrane family member 1 dynamics underlying lipid hydrolytic activity. Commun Biol, 7, 2024
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7VAF
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![BU of 7vaf by Molmil](/molmil-images/mine/7vaf) | |
7VAG
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![BU of 7vag by Molmil](/molmil-images/mine/7vag) | |
7VAD
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![BU of 7vad by Molmil](/molmil-images/mine/7vad) | |
7VAE
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![BU of 7vae by Molmil](/molmil-images/mine/7vae) | Cryo-EM structure of bovine NTCP complexed with YN69202Fab | 分子名称: | Fab heavy chain from antibody IgG clone number YN69202, Fab light chain from antibody IgG clone number YN69202, Solute carrier family 10 (Sodium/bile acid cotransporter family), ... | 著者 | Asami, J, Shimizu, T, Ohto, U. | 登録日 | 2021-08-29 | 公開日 | 2022-05-25 | 最終更新日 | 2022-07-13 | 実験手法 | ELECTRON MICROSCOPY (3.55 Å) | 主引用文献 | Structure of the bile acid transporter and HBV receptor NTCP. Nature, 606, 2022
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7WM4
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![BU of 7wm4 by Molmil](/molmil-images/mine/7wm4) | Cryo-EM structure of tetrameric TLR3 in complex with dsRNA (90 bp) | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, RNA (81-MER), ... | 著者 | Sakaniwa, K, Ohto, U, Shimizu, T. | 登録日 | 2022-01-14 | 公開日 | 2023-01-25 | 最終更新日 | 2023-08-30 | 実験手法 | ELECTRON MICROSCOPY (3.2 Å) | 主引用文献 | TLR3 forms a laterally aligned multimeric complex along double-stranded RNA for efficient signal transduction. Nat Commun, 14, 2023
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7VGR
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![BU of 7vgr by Molmil](/molmil-images/mine/7vgr) | |
7VGS
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![BU of 7vgs by Molmil](/molmil-images/mine/7vgs) | |
7BPS
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![BU of 7bps by Molmil](/molmil-images/mine/7bps) | Crystal structure of mouse TEX101 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, Testis-expressed protein 101, ... | 著者 | Masutani, M, Sakurai, S, Shimizu, T, Ohto, U. | 登録日 | 2020-03-23 | 公開日 | 2020-07-15 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | Crystal structure of TEX101, a glycoprotein essential for male fertility, reveals the presence of tandemly arranged Ly6/uPAR domains. Febs Lett., 594, 2020
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7BQI
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7BPR
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![BU of 7bpr by Molmil](/molmil-images/mine/7bpr) | Crystal structure of human TEX101 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, PLATINUM (II) ION, Testis-expressed protein 101 | 著者 | Masutani, M, Sakurai, S, Shimizu, T, Ohto, U. | 登録日 | 2020-03-23 | 公開日 | 2020-07-15 | 最終更新日 | 2020-12-23 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Crystal structure of TEX101, a glycoprotein essential for male fertility, reveals the presence of tandemly arranged Ly6/uPAR domains. Febs Lett., 594, 2020
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4QBZ
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![BU of 4qbz by Molmil](/molmil-images/mine/4qbz) | Crystal structure of human TLR8 in complex with DS-802 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-butyl[1,3]oxazolo[4,5-c]quinolin-4-amine, ... | 著者 | Tanji, H, Ohto, U, Shimizu, T. | 登録日 | 2014-05-09 | 公開日 | 2014-10-22 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Determinants of Activity at Human Toll-like Receptors 7 and 8: Quantitative Structure-Activity Relationship (QSAR) of Diverse Heterocyclic Scaffolds J.Med.Chem., 57, 2014
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5GMH
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![BU of 5gmh by Molmil](/molmil-images/mine/5gmh) | Crystal structure of monkey TLR7 in complex with R848 | 分子名称: | 1-[4-amino-2-(ethoxymethyl)-1H-imidazo[4,5-c]quinolin-1-yl]-2-methylpropan-2-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Zhang, Z, Ohto, U, Shimizu, T. | 登録日 | 2016-07-14 | 公開日 | 2016-11-02 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural Analysis Reveals that Toll-like Receptor 7 Is a Dual Receptor for Guanosine and Single-Stranded RNA Immunity, 45, 2016
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4R0A
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![BU of 4r0a by Molmil](/molmil-images/mine/4r0a) | Crystal structure of human TLR8 in complex with uridine mononucleoside | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor 8, ... | 著者 | Tanji, H, Ohto, U, Shimizu, T. | 登録日 | 2014-07-30 | 公開日 | 2015-01-14 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Toll-like receptor 8 senses degradation products of single-stranded RNA. Nat.Struct.Mol.Biol., 22, 2015
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4R6A
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![BU of 4r6a by Molmil](/molmil-images/mine/4r6a) | Crystal structure of human TLR8 in complex with Hybrid-2 | 分子名称: | 1-(4-amino-2-butyl-1H-imidazo[4,5-c]quinolin-1-yl)-2-methylpropan-2-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor 8, ... | 著者 | Tanji, H, Ohto, U, Shimizu, T. | 登録日 | 2014-08-22 | 公開日 | 2015-08-26 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Hybrid-2: AnImidazoquinoline Dual Toll-like receptor 7/8 Agonist that Potently Activates Cytokine Production by Human Newborn and Adult Leukocytes To be Published
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