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PDB: 17170 results

6ILZ
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Crystal structure of PKCiota in complex with inhibitor
Descriptor: 2-amino-5-[3-(piperazin-1-yl)phenyl]-N-(pyridin-4-yl)pyridine-3-carboxamide, Protein kinase C iota type
Authors:Baburajendran, N, Hill, J.
Deposit date:2018-10-21
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.261 Å)
Cite:Fragment-based Discovery of a Small-Molecule Protein Kinase C-iota Inhibitor Binding Post-kinase Domain Residues.
Acs Med.Chem.Lett., 10, 2019
4ADF
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CRYSTAL STRUCTURE OF THE HUMAN COLONY-STIMULATING FACTOR 1 (hCSF-1) CYTOKINE IN COMPLEX WITH THE VIRAL RECEPTOR BARF1
Descriptor: MACROPHAGE COLONY-STIMULATING FACTOR 1, SECRETED PROTEIN BARF1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Elegheert, J, Bracke, N, Savvides, S.N.
Deposit date:2011-12-23
Release date:2012-08-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (4.4 Å)
Cite:Allosteric Competitive Inactivation of Hematopoietic Csf-1 Signaling by the Viral Decoy Receptor Barf1.
Nat.Struct.Mol.Biol., 19, 2012
4ADQ
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CRYSTAL STRUCTURE OF THE MOUSE COLONY-STIMULATING FACTOR 1 (MCSF-1) CYTOKINE IN COMPLEX WITH THE VIRAL RECEPTOR BARF1
Descriptor: MACROPHAGE COLONY-STIMULATING FACTOR 1, SECRETED PROTEIN BARF1, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Elegheert, J, Bracke, N, Savvides, S.N.
Deposit date:2012-01-02
Release date:2012-08-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Allosteric Competitive Inactivation of Hematopoietic Csf-1 Signaling by the Viral Decoy Receptor Barf1.
Nat.Struct.Mol.Biol., 19, 2012
1JBD
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NMR Structure of the Complex Between alpha-bungarotoxin and a Mimotope of the Nicotinic Acetylcholine Receptor
Descriptor: LONG NEUROTOXIN 1, MIMOTOPE OF THE NICOTINIC ACETYLCHOLINE RECEPTOR
Authors:Scarselli, M, Spiga, O, Ciutti, A, Bracci, L, Lelli, B, Lozzi, L, Calamandrei, D, Bernini, A, Di Maro, D, Klein, S, Niccolai, N.
Deposit date:2001-06-04
Release date:2001-06-27
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:NMR structure of alpha-bungarotoxin free and bound to a mimotope of the nicotinic acetylcholine receptor.
Biochemistry, 41, 2002
1JXD
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SOLUTION STRUCTURE OF REDUCED CU(I) PLASTOCYANIN FROM SYNECHOCYSTIS PCC6803
Descriptor: COPPER (II) ION, PLASTOCYANIN
Authors:Bertini, I, Bryant, D.A, Ciurli, S, Dikiy, A, Fernandez, C.O, Luchinat, C, Safarov, N, Vila, A.J, Zhao, J.
Deposit date:2001-09-07
Release date:2001-09-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Backbone dynamics of plastocyanin in both oxidation states. Solution structure of the reduced form and comparison with the oxidized state.
J.Biol.Chem., 276, 2001
1FFW
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BU of 1ffw by Molmil
CHEY-BINDING DOMAIN OF CHEA IN COMPLEX WITH CHEY WITH A BOUND IMIDO DIPHOSPHATE
Descriptor: CHEMOTAXIS PROTEIN CHEA, CHEMOTAXIS PROTEIN CHEY, IMIDO DIPHOSPHATE, ...
Authors:Gouet, P, Chinardet, N, Welch, M, Guillet, V, Birck, C, Mourey, L, Samama, J.-P.
Deposit date:2000-07-26
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Further insights into the mechanism of function of the response regulator CheY from crystallographic studies of the CheY--CheA(124--257) complex.
Acta Crystallogr.,Sect.D, 57, 2001
1CUO
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CRYSTAL STRUCTURE ANALYSIS OF ISOMER-2 AZURIN FROM METHYLOMONAS J
Descriptor: COPPER (II) ION, PROTEIN (AZURIN ISO-2)
Authors:Inoue, T, Nishio, N, Kai, Y, Suzuki, S, Kataoka, K.
Deposit date:1999-08-21
Release date:2000-08-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The significance of the flexible loop in the azurin (Az-iso2) from the obligate methylotroph Methylomonas sp. strain J.
J.Mol.Biol., 333, 2003
1UBE
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MsRecA-ADP Complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, RecA
Authors:Datta, S, Krishna, R, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2003-04-04
Release date:2003-07-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes
J.BACTERIOL., 185, 2003
6K33
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Structure of PSI-isiA supercomplex from Thermosynechococcus vulcanus
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Akita, F, Nagao, R, Kato, K, Shen, J.R, Miyazaki, N.
Deposit date:2019-05-16
Release date:2020-05-20
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Structure of a cyanobacterial photosystem I surrounded by octadecameric IsiA antenna proteins.
Commun Biol, 3, 2020
1JTK
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Crystal structure of cytidine deaminase from Bacillus subtilis in complex with the inhibitor tetrahydrodeoxyuridine
Descriptor: TETRAHYDRODEOXYURIDINE, ZINC ION, cytidine deaminase
Authors:Johansson, E, Mejlhede, N, Neuhard, J, Larsen, S.
Deposit date:2001-08-21
Release date:2002-04-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of the tetrameric cytidine deaminase from Bacillus subtilis at 2.0 A resolution.
Biochemistry, 41, 2002
6JTC
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Crystal structure of dipeptidyl peptidase 11 (DPP11) with SH-5 from Porphyromonas gingivalis (Space)
Descriptor: 2-(2-azanylethylamino)-5-nitro-benzoic acid, Asp/Glu-specific dipeptidyl-peptidase, GLYCEROL
Authors:Sakamoto, Y, Suzuki, Y, Iizuka, I, Roppongi, S, Kushibiki, C, Nakamura, A, Ogasawara, W, Tanaka, N.
Deposit date:2019-04-10
Release date:2019-10-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Fragment-based discovery of the first nonpeptidyl inhibitor of an S46 family peptidase.
Sci Rep, 9, 2019
6JUX
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Crystal structure of human ALK2 kinase domain with R206H mutation in complex with RK-71807
Descriptor: 4-(1-ethyl-3-pyridin-3-yl-pyrazol-4-yl)-~{N}-(4-piperazin-1-ylphenyl)pyrimidin-2-amine, Activin receptor type-1, SULFATE ION
Authors:Sakai, N, Mishima-Tsumagari, C, Matsumoto, T, Shirouzu, M.
Deposit date:2019-04-15
Release date:2020-04-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis of Activin Receptor-Like Kinase 2 (R206H) Inhibition by Bis-heteroaryl Pyrazole-Based Inhibitors for the Treatment of Fibrodysplasia Ossificans Progressiva Identified by the Integration of Ligand-Based and Structure-Based Drug Design Approaches.
Acs Omega, 5, 2020
5TCB
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BU of 5tcb by Molmil
Structure of the glycoside hydrolase domain of PelA from Pseudomonas aeruginosa
Descriptor: PelA
Authors:Alnabelseya, N, Baker, P, Robinson, H, Howell, P.L.
Deposit date:2016-09-14
Release date:2017-09-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.535 Å)
Cite:Microbial glycoside hydrolases display cross-kingdom activity against bacterial and fungal biofilms
To Be Published
6HDX
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BU of 6hdx by Molmil
Crystal structure of 2-Hydroxyisobutyryl-CoA Ligase (HCL) in the postadenylation state in complex with R3-HIB-AMP
Descriptor: (2R)-3-HYDROXY-2-METHYLPROPANOIC ACID, 2-hydroxyisobutyryl-CoA synthetase, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (2~{R})-2-methyl-3-oxidanyl-propanoate
Authors:Zahn, M, Rohwerder, T, Strater, N.
Deposit date:2018-08-20
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of 2-Hydroxyisobutyric Acid-CoA Ligase Reveal Determinants of Substrate Specificity and Describe a Multi-Conformational Catalytic Cycle.
J.Mol.Biol., 431, 2019
5TCH
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Crystal structure of tryptophan synthase from M. tuberculosis - ligand-free form, TrpA-G66V mutant
Descriptor: FORMIC ACID, MALONATE ION, Tryptophan synthase alpha chain, ...
Authors:Michalska, K, Maltseva, N, Jedrzejczak, R, Wellington, S, Nag, P.P, Fisher, S.L, Schreiber, S.L, Hung, D.T, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-09-15
Release date:2017-05-31
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A small-molecule allosteric inhibitor of Mycobacterium tuberculosis tryptophan synthase.
Nat. Chem. Biol., 13, 2017
5T6U
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BU of 5t6u by Molmil
Crystal structure of mouse cathepsin K at 2.9 Angstroms resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin K, SULFATE ION
Authors:Law, S, Aguda, A, Nguyen, N, Brayer, G, Bromme, D.
Deposit date:2016-09-01
Release date:2017-01-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib.
Biochem. J., 474, 2017
1IAI
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BU of 1iai by Molmil
IDIOTYPE-ANTI-IDIOTYPE FAB COMPLEX
Descriptor: ANTI-IDIOTYPIC FAB 409.5.3 (IGG2A), IDIOTYPIC FAB 730.1.4 (IGG1) OF VIRUS NEUTRALIZING ANTIBODY
Authors:Ban, N, Escobar, C, Garcia, R, Hasel, K, Day, J, Greenwood, A, McPherson, A.
Deposit date:1993-12-28
Release date:1996-03-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of an idiotype-anti-idiotype Fab complex.
Proc.Natl.Acad.Sci.USA, 91, 1994
5TCJ
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Crystal structure of tryptophan synthase from M. tuberculosis - aminoacrylate and BRD4592-bound form
Descriptor: (2R,3S,4R)-3-(2'-fluoro[1,1'-biphenyl]-4-yl)-4-(hydroxymethyl)azetidine-2-carbonitrile, 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, CESIUM ION, ...
Authors:Michalska, K, Maltseva, N, Jedrzejczak, R, Wellington, S, Nag, P.P, Fisher, S.L, Schreiber, S.L, Hung, D.T, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-09-15
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A small-molecule allosteric inhibitor of Mycobacterium tuberculosis tryptophan synthase.
Nat. Chem. Biol., 13, 2017
1CYD
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BU of 1cyd by Molmil
CARBONYL REDUCTASE COMPLEXED WITH NADPH AND 2-PROPANOL
Descriptor: CARBONYL REDUCTASE, ISOPROPYL ALCOHOL, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Tanaka, N, Nonaka, T, Mitsui, Y.
Deposit date:1995-09-01
Release date:1996-10-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the ternary complex of mouse lung carbonyl reductase at 1.8 A resolution: the structural origin of coenzyme specificity in the short-chain dehydrogenase/reductase family.
Structure, 4, 1996
1JUD
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BU of 1jud by Molmil
L-2-HALOACID DEHALOGENASE
Descriptor: L-2-HALOACID DEHALOGENASE
Authors:Hisano, T, Hata, Y, Fujii, T, Liu, J.-Q, Kurihara, T, Esaki, N, Soda, K.
Deposit date:1996-06-03
Release date:1996-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of L-2-haloacid dehalogenase from Pseudomonas sp. YL. An alpha/beta hydrolase structure that is different from the alpha/beta hydrolase fold.
J.Biol.Chem., 271, 1996
7SMJ
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BU of 7smj by Molmil
F2N structure, protein design with deep learning
Descriptor: AI-designed TIM-barrel F2N
Authors:Mathews, I.I, Anand-Achim, N, Huang, P.
Deposit date:2021-10-26
Release date:2022-03-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Protein sequence design with a learned potential.
Nat Commun, 13, 2022
6HE0
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BU of 6he0 by Molmil
Crystal structure of 2-Hydroxyisobutyryl-CoA Ligase (HCL) in complex with 2-HIB-AMP and CoA in the thioesterfication state
Descriptor: 2-hydroxyisobutyryl-CoA synthetase, ADENOSINE MONOPHOSPHATE, COENZYME A, ...
Authors:Zahn, M, Rohwerder, T, Strater, N.
Deposit date:2018-08-20
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structures of 2-Hydroxyisobutyric Acid-CoA Ligase Reveal Determinants of Substrate Specificity and Describe a Multi-Conformational Catalytic Cycle.
J.Mol.Biol., 431, 2019
5XJB
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The Crystal Structure of the Minimal Core Domain of the Microtubule Depolymerizer KIF2C Complexed with ADP-Mg-BeFx
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Kinesin-like protein KIF2C, ...
Authors:Ogawa, T, Jiang, X, Hirokawa, N.
Deposit date:2017-04-30
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanism of Catalytic Microtubule Depolymerization via KIF2-Tubulin Transitional Conformation
Cell Rep, 20, 2017
1IA0
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KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, KINESIN-LIKE PROTEIN KIF1A, ...
Authors:Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
Deposit date:2001-03-22
Release date:2002-03-22
Last modified:2021-10-27
Method:ELECTRON MICROSCOPY (15 Å)
Cite:Switch-based Mechanism of Kinesin Motors
Nature, 411, 2001
5TPZ
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Crystal structure of amino terminal domains of the NMDA receptor subunit GluN1 and GluN2B in apo closed state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, NMDA 2B, ...
Authors:Romero-Hernandez, A, Simorwski, N, Karakas, E, Furukawa, H.
Deposit date:2016-10-21
Release date:2016-12-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.095 Å)
Cite:Molecular Basis for Subtype Specificity and High-Affinity Zinc Inhibition in the GluN1-GluN2A NMDA Receptor Amino-Terminal Domain.
Neuron, 92, 2016

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