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PDB: 165 件

4GTC
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BU of 4gtc by Molmil
T. Maritima FDTS (E144R mutant) plus FAD
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX
著者Mathews, I.I, Lesley, S.A, Kohen, A, Prabhakar, A.
登録日2012-08-28
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Folate binding site of flavin-dependent thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 109, 2012
5HD8
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BU of 5hd8 by Molmil
Crystal structure of disulfide cross-linked D417C ClC-ec1
分子名称: CHLORIDE ION, FAB FRAGMENT (HEAVY CHAIN), FAB FRAGMENT (LIGHT CHAIN), ...
著者Mathews, I.I, Khantwal, C.M, Maduke, M.
登録日2016-01-05
公開日2017-01-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Conformational change in CLC transporters: beyond the rotation of Gluex
To be published
7SMJ
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BU of 7smj by Molmil
F2N structure, protein design with deep learning
分子名称: AI-designed TIM-barrel F2N
著者Mathews, I.I, Anand-Achim, N, Huang, P.
登録日2021-10-26
公開日2022-03-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Protein sequence design with a learned potential.
Nat Commun, 13, 2022
9BC3
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BU of 9bc3 by Molmil
Transglutaminase 2 - Alternate state
分子名称: CALCIUM ION, HB-225 (gluten peptidomimetic TG2 inhibitor), Protein-glutamine gamma-glutamyltransferase 2
著者Mathews, I.I, Sewa, A.S, Khosla, C.
登録日2024-04-07
公開日2024-07-03
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structural and mechanistic analysis of Ca 2+ -dependent regulation of transglutaminase 2 activity using a Ca 2+ -bound intermediate state.
Proc.Natl.Acad.Sci.USA, 121, 2024
3G4A
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BU of 3g4a by Molmil
Crystal structure of flavine dependant thymidylate synthase S88A mutant from Thermotoga maritima at 1.95 angstrom resolution
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX
著者Mathews, I.I, Lesley, S.A, Kohen, A.
登録日2009-02-03
公開日2009-04-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献An unusual mechanism of thymidylate biosynthesis in organisms containing the thyX gene.
Nature, 458, 2009
3G4C
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BU of 3g4c by Molmil
Flavine dependant thymidylate syntahse S88C mutant
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX
著者Mathews, I.I, Lesley, S.A, Kohen, A.
登録日2009-02-03
公開日2009-04-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献An unusual mechanism of thymidylate biosynthesis in organisms containing the thyX gene.
Nature, 458, 2009
9BC2
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BU of 9bc2 by Molmil
Transglutaminase 2 - Open State
分子名称: CHLORIDE ION, HB-225 (gluten peptidomimetic TG2 inhibitor), Protein-glutamine gamma-glutamyltransferase 2, ...
著者Mathews, I.I, Sewa, A, Khosla, C.
登録日2024-04-07
公開日2024-07-03
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural and mechanistic analysis of Ca 2+ -dependent regulation of transglutaminase 2 activity using a Ca 2+ -bound intermediate state.
Proc.Natl.Acad.Sci.USA, 121, 2024
6APG
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BU of 6apg by Molmil
Trans-acting transferase from Disorazole synthase with malonate
分子名称: CALCIUM ION, DisD protein, GLYCEROL, ...
著者Mathews, I.I, Lyubimov, A.Y, Soltis, S.M, Khosla, C, Robbins, T, Cohen, A.E.
登録日2017-08-17
公開日2018-04-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Conformational Flexibility of the Acyltransferase from the Disorazole Polyketide Synthase Is Revealed by an X-ray Free-Electron Laser Using a Room-Temperature Sample Delivery Method for Serial Crystallography.
Biochemistry, 56, 2017
6APF
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BU of 6apf by Molmil
Trans-acting transferase from Disorazole synthase complexed with Citrate.
分子名称: CITRIC ACID, DisD protein, GLYCEROL, ...
著者Mathews, I.I, Lyubimov, A, Soltis, M, Khosla, C, Cohen, A, Robbins, T.
登録日2017-08-17
公開日2018-04-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献The Conformational Flexibility of the Acyltransferase from the Disorazole Polyketide Synthase Is Revealed by an X-ray Free-Electron Laser Using a Room-Temperature Sample Delivery Method for Serial Crystallography.
Biochemistry, 56, 2017
8VTJ
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BU of 8vtj by Molmil
Crystal structure of R. sphaeroides Photosynthetic Reaction Center variant Y(M210)2-cyanophenylalanine
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
著者Mathews, I, Tran, K, Boxer, S.G.
登録日2024-01-26
公開日2024-03-13
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Crystal structure of R. sphaeroides Photosynthetic Reaction Center variant Y(M210)2-cyanophenylalanine
To Be Published
7SEH
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BU of 7seh by Molmil
Glucose-6-phosphate 1-dehydrogenase (K403QdLtL)
分子名称: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Mathews, I.I, Garcia, A.A, Wakatsuki, S, Mochly-Rosen, D.
登録日2021-09-30
公開日2022-08-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Stabilization of glucose-6-phosphate dehydrogenase oligomers enhances catalytic activity and stability of clinical variants.
J.Biol.Chem., 298, 2022
7SEI
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BU of 7sei by Molmil
Glucose-6-phosphate 1-dehydrogenase (K403Q)
分子名称: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Mathews, I.I, Garcia, A.A, Wakatsuki, S, Mochly-Rosen, D.
登録日2021-09-30
公開日2022-08-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Stabilization of glucose-6-phosphate dehydrogenase oligomers enhances catalytic activity and stability of clinical variants.
J.Biol.Chem., 298, 2022
7T2V
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BU of 7t2v by Molmil
SARS CoV2 Mpro C145S mutant
分子名称: 3C-Like Protease
著者Mathews, I.I, Hameedi, M.A, Wakatsuki, S.
登録日2021-12-06
公開日2022-09-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structural and functional characterization of NEMO cleavage by SARS-CoV-2 3CLpro.
Nat Commun, 13, 2022
7T2T
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BU of 7t2t by Molmil
SARS-CoV2 Mpro native form
分子名称: 3C-like proteinase
著者Mathews, I.I, Hameedi, M.A, Wakatsuki, S.
登録日2021-12-06
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural and functional characterization of NEMO cleavage by SARS-CoV-2 3CLpro.
Nat Commun, 13, 2022
3N0C
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BU of 3n0c by Molmil
TM0449 mutant crystal grown by hanging drop method
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX
著者Mathews, I.I.
登録日2010-05-13
公開日2011-05-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Diffraction study of protein crystals grown in cryoloops and micromounts.
J.Appl.Crystallogr., 43, 2010
3N0B
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BU of 3n0b by Molmil
TM0449 mutant crystals grown in loops/micromounts
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX
著者Mathews, I.I.
登録日2010-05-13
公開日2011-05-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Diffraction study of protein crystals grown in cryoloops and micromounts.
J.Appl.Crystallogr., 43, 2010
6MLK
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BU of 6mlk by Molmil
Structure of Thioesterase from DEBS with a thioesterase-specific antibody
分子名称: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6, CHLORIDE ION, ...
著者Mathews, I.I, Li, X, Khosla, C.
登録日2018-09-27
公開日2018-10-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Discovery and Characterization of a Thioesterase-Specific Monoclonal Antibody That Recognizes the 6-Deoxyerythronolide B Synthase.
Biochemistry, 57, 2018
8EUA
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BU of 8eua by Molmil
Structure of SARS-CoV2 PLpro bound to a covalent inhibitor
分子名称: Papain-like protease nsp3, SULFATE ION, ZINC ION, ...
著者Mathews, I.I, Pokhrel, S, Wakatsuki, S.
登録日2022-10-18
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Potent and selective covalent inhibition of the papain-like protease from SARS-CoV-2.
Nat Commun, 14, 2023
4GTE
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BU of 4gte by Molmil
T. Maritima FDTS (E144R mutant) with FAD and Folate
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, N-({4-[(6aR)-3-amino-1-oxo-1,2,5,6,6a,7-hexahydroimidazo[1,5-f]pteridin-8(9H)-yl]phenyl}carbonyl)-L-glutamic acid, Thymidylate synthase thyX
著者Mathews, I.I, Lesley, S.A, Kohen, A, Prabhakar, A.
登録日2012-08-28
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Folate binding site of flavin-dependent thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GT9
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BU of 4gt9 by Molmil
T. Maritima FDTS with FAD, dUMP and Folate.
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Mathews, I.I, Lesley, S.A, Kohen, A.
登録日2012-08-28
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Folate binding site of flavin-dependent thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GTD
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BU of 4gtd by Molmil
T. Maritima FDTS (E144R mutant) with FAD and dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX
著者Mathews, I.I, Lesley, S.A, Kohen, A, Prabhakar, A.
登録日2012-08-28
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Folate binding site of flavin-dependent thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 109, 2012
4KAR
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BU of 4kar by Molmil
Crystal structure of FDTS (TM0449) mutant (H53D) with FAD
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NONAETHYLENE GLYCOL, Thymidylate synthase
著者Mathews, I.I.
登録日2013-04-22
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Flavin-Dependent Thymidylate Synthase as a Drug Target for Deadly Microbes: Mutational Study and a Strategy for Inhibitor Design.
J Bioterror Biodef, Suppl 12, 2013
4GTB
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BU of 4gtb by Molmil
T. Maritima FDTS with FAD, dUMP, and Raltitrexed.
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Mathews, I.I, Lesley, S.A, Kohen, A.
登録日2012-08-28
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Folate binding site of flavin-dependent thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GTL
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BU of 4gtl by Molmil
T. Maritima FDTS (R174K mutant) with FAD
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX
著者Mathews, I.I, Lesley, S.A, Kohen, A.
登録日2012-08-28
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Folate binding site of flavin-dependent thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GTA
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BU of 4gta by Molmil
T. Maritima FDTS with FAD, dUMP, and Folinic Acid
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Mathews, I.I, Lesley, S.A, Kohen, A.
登録日2012-08-28
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Folate binding site of flavin-dependent thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 109, 2012

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件を2024-07-17に公開中

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