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PDB: 1323 results

6ASF
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BU of 6asf by Molmil
NMR and Restrained Molecular Dynamics Determination of the Structure of an Aza-Benzimidazole Derivative Complex with the DNA Minor Groove of an -AAGATA- Sequence
Descriptor: DNA (5'-D(*CP*CP*AP*AP*GP*AP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*TP*CP*TP*TP*GP*G)-3')
Authors:Harika, N.K, Germann, M.W, Boykin, D.W.
Deposit date:2017-08-24
Release date:2018-01-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:First Structure of a Designed Minor Groove Binding Heterocyclic Cation that Specifically Recognizes Mixed DNA Base Pair Sequences.
Chemistry, 23, 2017
4APD
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BU of 4apd by Molmil
Liraglutide
Descriptor: LIRAGLUTIDE, N-hexadecanoyl-L-glutamic acid
Authors:Ludvigsen, S, Steensgaard, D.B, Thomsen, J.K, Strauss, H, Normann, M.
Deposit date:2012-04-02
Release date:2013-07-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Liraglutide
To be Published
4B2N
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BU of 4b2n by Molmil
Latex Oxygenase RoxA
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 70 KDA PROTEIN, HEME C, ...
Authors:Seidel, J, Schmitt, G, Hoffmann, M, Jendrossek, D, Einsle, O.
Deposit date:2012-07-17
Release date:2013-07-24
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the processive rubber oxygenase RoxA from Xanthomonas sp.
Proc. Natl. Acad. Sci. U.S.A., 110, 2013
4B4L
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BU of 4b4l by Molmil
CRYSTAL STRUCTURE OF AN ARD DAP-KINASE 1 MUTANT
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE 1, PENTAETHYLENE GLYCOL, SULFATE ION
Authors:Temmerman, K, Pogenberg, V, Jonko, W, Wilmanns, M.
Deposit date:2012-07-31
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Pef/Y Substrate Recognition and Signature Motif Plays a Critical Role in Dapk-Related Kinase Activity.
Chem.Biol., 21, 2014
7O92
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BU of 7o92 by Molmil
hypothetical protein UY81_C0065G0003 residues 18-54 from Candidatus Giovannonibacteria bacterium fused to GCN4 adaptors
Descriptor: hypothetical protein UY81_C0065G0003 residues 18-54 from Candidatus Giovannonibacteria bacterium fused to GCN4 adaptors
Authors:Adlakha, J, Albrecht, R, Hartmann, M.D.
Deposit date:2021-04-15
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:hypothetical protein UY81_C0065G0003 residues 18-54 from Candidatus Giovannonibacteria bacterium fused to GCN4 adaptors
To Be Published
7OAF
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BU of 7oaf by Molmil
conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A, crystal form III
Descriptor: General control transcription factor GCN4,conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A,General control transcription factor GCN4, PENTAETHYLENE GLYCOL
Authors:Adlakha, J, Albrecht, R, Hartmann, M.D.
Deposit date:2021-04-19
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A, crystal form III
To Be Published
7OAC
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BU of 7oac by Molmil
conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A, crystal form I
Descriptor: General control transcription factor GCN4,conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A,General control transcription factor GCN4
Authors:Adlakha, J, Albrecht, R, Hartmann, M.D.
Deposit date:2021-04-19
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A, crystal form I
To Be Published
7O9V
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BU of 7o9v by Molmil
hypothetical protein OMM_04225 residues 244-274 from Candidatus Magnetoglobus multicellularis fused to GCN4 adaptors
Descriptor: General control transcription factor GCN4,hypothetical protein OMM_04225 residues 244-274 from Candidatus Magnetoglobus multicellularis fused to GCN4 adaptors,General control transcription factor GCN4
Authors:Adlakha, J, Albrecht, R, Hartmann, M.D.
Deposit date:2021-04-17
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:hypothetical protein OMM_04225 residues 244-274 from Candidatus Magnetoglobus multicellularis fused to GCN4 adaptors
To Be Published
7O97
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BU of 7o97 by Molmil
hypothetical protein UY81_C0065G0003 from Candidatus Giovannonibacteria bacterium converted into a canonical coiled coil
Descriptor: hypothetical protein UY81_C0065G0003 from Candidatus Giovannonibacteria bacterium converted into a canonical coiled coil
Authors:Adlakha, J, Albrecht, R, Hartmann, M.D.
Deposit date:2021-04-15
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:hypothetical protein UY81_C0065G0003 from Candidatus Giovannonibacteria bacterium converted into a canonical coiled coil
To Be Published
7OAD
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BU of 7oad by Molmil
conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A, crystal form II
Descriptor: General control transcription factor GCN4,conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A,General control transcription factor GCN4
Authors:Adlakha, J, Albrecht, R, Hartmann, M.D.
Deposit date:2021-04-19
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A, crystal form II
To Be Published
7OAA
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BU of 7oaa by Molmil
conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors
Descriptor: General control transcription factor GCN4,conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors,General control transcription factor GCN4
Authors:Adlakha, J, Albrecht, R, Hartmann, M.D.
Deposit date:2021-04-19
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors
To Be Published
5U4W
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BU of 5u4w by Molmil
Cryo-EM Structure of Immature Zika Virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, E protein, M protein, ...
Authors:Mangala Prasad, V, Miller, A.S, Klose, T, Sirohi, D, Buda, G, Jiang, W, Kuhn, R.J, Rossmann, M.G.
Deposit date:2016-12-06
Release date:2017-01-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:Structure of the immature Zika virus at 9 angstrom resolution.
Nat. Struct. Mol. Biol., 24, 2017
5UHY
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BU of 5uhy by Molmil
A Human Antibody Against Zika Virus Crosslinks the E Protein to Prevent Infection
Descriptor: ZV67 Fab chain 1, ZV67 Fab chain 2, envelope protein
Authors:Hasan, S.S, Miller, A, Sapparapu, G, Fernandez, E, Klose, T, Long, F, Fokine, A, Porta, J.C, Jiang, W, Diamond, M.S, Crowe Jr, J.E, Kuhn, R.J, Rossmann, M.G.
Deposit date:2017-01-12
Release date:2017-03-29
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:A human antibody against Zika virus crosslinks the E protein to prevent infection.
Nat Commun, 8, 2017
5TIQ
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BU of 5tiq by Molmil
The Structure of the Major Capsid protein of PBCV-1
Descriptor: 6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose-(1-2)-beta-L-rhamnopyranose-(1-4)-beta-D-xylopyranose-(1-4)-[alpha-D-mannopyranose-(1-3)-alpha-D-rhamnopyranose-(1-3)][alpha-D-galactopyranose-(1-2)]alpha-L-fucopyranose-(1-3)-[beta-D-xylopyranose-(1-4)]beta-D-glucopyranose, MERCURY (II) ION, Major capsid protein, ...
Authors:Klose, T, De Castro, C, Speciale, I, Molinaro, A, Van Etten, J.L, Rossmann, M.G.
Deposit date:2016-10-03
Release date:2017-10-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.537 Å)
Cite:Structure of the chlorovirus PBCV-1 major capsid glycoprotein determined by combining crystallographic and carbohydrate molecular modeling approaches.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5TJD
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BU of 5tjd by Molmil
Computer-based rational design of improved functionality for antibody catalysts toward organophosphorus compounds
Descriptor: FAB A.17 L47K mutant HEAVY CHAIN, FAB A.17 L47K mutant Light Chain
Authors:Chatziefthimiou, S, Stepanova, A, Smirnov, I, Gabibov, A, Wilmanns, M.
Deposit date:2016-10-04
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Multiscale computation delivers organophosphorus reactivity and stereoselectivity to immunoglobulin scavengers.
Proc.Natl.Acad.Sci.USA, 2020
5T68
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BU of 5t68 by Molmil
Crystal structure of Syk catalytic domain in complex with a furo[3,2-d]pyrimidine
Descriptor: N~4~-cyclopropyl-N~2~-(3-methyl-1H-indazol-6-yl)furo[3,2-d]pyrimidine-2,4-diamine, Tyrosine-protein kinase SYK
Authors:Argiriadi, M.A, Hoemann, M, Wilson, N, Banach, D, Burchat, A, Calderwood, D, Clapham, B, Cox, P, Duignan, D.B, Konopacki, D, Somal, G, Vasudevan, A.
Deposit date:2016-09-01
Release date:2016-10-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Synthesis and optimization of furano[3,2-d]pyrimidines as selective spleen tyrosine kinase (Syk) inhibitors.
Bioorg. Med. Chem. Lett., 26, 2016
8CMP
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BU of 8cmp by Molmil
DNA-binding bacterial histone protein HBB from Bdellovibrio bacteriovorus
Descriptor: CBFD_NFYB_HMF domain-containing protein
Authors:Hu, Y, Joiner, J.D, Albrecht, R, Hartmann, M.D.
Deposit date:2023-02-20
Release date:2024-03-06
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Atomic resolution structure of a DNA-binding bacterial histone from Bdellovibrio bacteriovorus
To Be Published
5TIP
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BU of 5tip by Molmil
The Structure of the Major Capsid protein of PBCV-1
Descriptor: 6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose-(1-2)-beta-L-rhamnopyranose-(1-4)-beta-D-xylopyranose-(1-4)-[alpha-D-mannopyranose-(1-3)-alpha-D-rhamnopyranose-(1-3)][alpha-D-galactopyranose-(1-2)]alpha-L-fucopyranose-(1-3)-[beta-D-xylopyranose-(1-4)]beta-D-glucopyranose, MERCURY (II) ION, Major capsid protein, ...
Authors:Klose, T, De Castro, C, Speciale, I, Molinaro, A, Van Etten, J.L, Rossmann, M.G.
Deposit date:2016-10-03
Release date:2017-10-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the chlorovirus PBCV-1 major capsid glycoprotein determined by combining crystallographic and carbohydrate molecular modeling approaches.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5VF3
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BU of 5vf3 by Molmil
Bacteriophage T4 isometric capsid
Descriptor: Capsid vertex protein gp24, Highly immunogenic outer capsid protein, Major capsid protein, ...
Authors:Chen, Z, Sun, L, Zhang, Z, Fokine, A, Padilla-Sanchez, V, Hanein, D, Jiang, W, Rossmann, M.G, Rao, V.B.
Deposit date:2017-04-06
Release date:2017-09-13
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the bacteriophage T4 isometric head at 3.3- angstrom resolution and its relevance to the assembly of icosahedral viruses.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7KNG
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BU of 7kng by Molmil
2.10A resolution structure of independent Phosphoglycerate mutase from C. elegans in complex with a macrocyclic peptide inhibitor (Ce-2 Y7F)
Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, CHLORIDE ION, DTY-ASP-TYR-PRO-GLY-ASP-PHE-CYS-TYR-LEU-TYR-GLY-THR-CYS, ...
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Weidmann, M, Dranchak, P, Aitha, M, Queme, B, Collmus, C.D, Kanter, L, Lamy, L, Tao, D, Rai, G, Suga, H, Inglese, J.
Deposit date:2020-11-04
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-activity relationship of ipglycermide binding to phosphoglycerate mutases.
J.Biol.Chem., 296, 2021
7KNF
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BU of 7knf by Molmil
1.80A resolution structure of independent Phosphoglycerate mutase from C. elegans in complex with a macrocyclic peptide inhibitor (Ce-1 NHOH)
Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, DTY-ASP-TYR-PRO-GLY-ASP-HIS-CYS-TYR-LEU-TYR-GLY-THR, SODIUM ION, ...
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Weidmann, M, Dranchak, P, Aitha, M, Queme, B, Collmus, C.D, Kanter, L, Lamy, L, Tao, D, Rai, G, Suga, H, Inglese, J.
Deposit date:2020-11-04
Release date:2021-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-activity relationship of ipglycermide binding to phosphoglycerate mutases.
J.Biol.Chem., 296, 2021
7KCR
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BU of 7kcr by Molmil
Cryo-EM structure of Zika virus in complex with E protein cross-linking human monoclonal antibody ADI30056
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADI30056 Fab heavy chain variable region, ADI30056 Fab light chain variable region, ...
Authors:Sevvana, M, Rogers, T.F, Miller, A.S, Long, F, Klose, T, Beutler, N, Lai, Y.C, Parren, M, Walker, L.M, Buda, G, Burton, D.R, Rossmann, M.G, Kuhn, R.J.
Deposit date:2020-10-07
Release date:2020-12-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural Basis of Zika Virus Specific Neutralization in Subsequent Flavivirus Infections.
Viruses, 12, 2020
5W3M
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BU of 5w3m by Molmil
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:1, full particle)
Descriptor: C5 antibody variable heavy domain, C5 antibody variable light domain, viral protein 1, ...
Authors:Liu, Y, Dong, Y, Rossmann, M.G.
Deposit date:2017-06-08
Release date:2017-07-12
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (2.26 Å)
Cite:Antibody-induced uncoating of human rhinovirus B14.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

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PDB entries from 2024-07-17

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