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PDB: 51964 results

2ZRS
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Crystal structure of Ca2+-bound form of des3-23ALG-2
Descriptor: CALCIUM ION, Programmed cell death protein 6
Authors:Suzuki, H, Kawasaki, M, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
Deposit date:2008-09-01
Release date:2008-11-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystallization and X-ray diffraction analysis of N-terminally truncated human ALG-2
ACTA CRYSTALLOGR.,SECT.F, 64, 2008
5L3O
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BU of 5l3o by Molmil
Crystal Structure of Human Carbonic Anhydrase II in Complex with a Quinoline Oligoamide Foldamer
Descriptor: Aromatic foldamer, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Jewginski, M, Langlois d'Estaintot, B, Granier, T, Huc, Y.
Deposit date:2016-05-24
Release date:2017-03-01
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Self-Assembled Protein-Aromatic Foldamer Complexes with 2:3 and 2:2:1 Stoichiometries.
J. Am. Chem. Soc., 139, 2017
6HHM
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BU of 6hhm by Molmil
Crystal structure of the family S1_7 ulvan-specific sulfatase FA22070 from Formosa agariphila
Descriptor: Arylsulfatase, CALCIUM ION
Authors:Roret, T, Prechoux, A, Michel, G, Czjzek, M.
Deposit date:2018-08-28
Release date:2019-06-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:A marine bacterial enzymatic cascade degrades the algal polysaccharide ulvan.
Nat.Chem.Biol., 15, 2019
4K2P
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BU of 4k2p by Molmil
The Structure of a Quintuple Mutant of the Tiam1 PH-CC-Ex Domain
Descriptor: CALCIUM ION, T-lymphoma invasion and metastasis-inducing protein 1
Authors:Joshi, M, Gakhar, L, Fuentes, E.J.
Deposit date:2013-04-09
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:High-resolution structure of the Tiam1 PHn-CC-Ex domain.
Acta Crystallogr.,Sect.F, 69, 2013
2ZKF
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BU of 2zkf by Molmil
Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA
Descriptor: DNA (5'-D(*DCP*DTP*DAP*DTP*DCP*(5CM)P*DGP*DGP*DTP*DGP*DA)-3'), DNA (5'-D(P*DCP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DAP*DGP*DA)-3'), E3 ubiquitin-protein ligase UHRF1
Authors:Arita, K, Ariyoshi, M, Tochio, H, Nakamura, Y, Shirakawa, M.
Deposit date:2008-03-19
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
Nature, 455, 2008
2ZMF
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BU of 2zmf by Molmil
Crystal structure of the C-terminal GAF domain of human phosphodiesterase 10A
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A
Authors:Handa, N, Kishishita, S, Mizohata, E, Omori, K, Kotera, J, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-17
Release date:2008-04-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the GAF-B Domain from Human Phosphodiesterase 10A Complexed with Its Ligand, cAMP
J.Biol.Chem., 283, 2008
3DBS
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BU of 3dbs by Molmil
Structure of PI3K gamma in complex with GDC0941
Descriptor: 2-(1H-indazol-4-yl)-6-{[4-(methylsulfonyl)piperazin-1-yl]methyl}-4-morpholin-4-yl-thieno[3,2-d]pyrimidine, Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
Authors:Wiesmann, C, Ultsch, M.
Deposit date:2008-06-02
Release date:2008-06-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The identification of 2-(1H-indazol-4-yl)-6-(4-methanesulfonyl-piperazin-1-ylmethyl)-4-morpholin-4-yl-thieno[3,2-d]pyrimidine (GDC-0941) as a potent, selective, orally bioavailable inhibitor of class I PI3 kinase for the treatment of cancer
J.Med.Chem., 51, 2008
2ZMZ
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BU of 2zmz by Molmil
The 1.37-A crystal structure of the hydroxylamine-induced deoxy-form of the copper-bound tyrosinase in complex with a caddie protein from Streptomyces castaneoglobisporus
Descriptor: CADDIE, COPPER (I) ION, NITRATE ION, ...
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2008-04-21
Release date:2009-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:X-Ray Snapshots of a Hydroxylation Mechanism of Tyrosinase
To be Published
2ZVO
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BU of 2zvo by Molmil
NEMO CoZi domain in complex with diubiquitin in C2 space group
Descriptor: NF-kappa-B essential modulator, UBC protein
Authors:Rahighi, S, Ikeda, F, Kawasaki, M, Akutsu, M, Suzuki, N, Kato, R, Kensche, T, Uejima, T, Bloor, S, Komander, D, Randow, F, Wakatsuki, S, Dikic, I.
Deposit date:2008-11-12
Release date:2009-03-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation
Cell(Cambridge,Mass.), 136, 2009
2ZOT
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BU of 2zot by Molmil
Crystal structure of human F-spondin reeler domain (fragment 1)
Descriptor: Spondin-1
Authors:Nagae, M, Nogi, T, Takagi, J.
Deposit date:2008-06-07
Release date:2008-10-14
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the F-spondin reeler domain reveals a unique beta-sandwich fold with a deformable disulfide-bonded loop
Acta Crystallogr.,Sect.D, 64, 2008
2ZVU
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BU of 2zvu by Molmil
Crystal structure of rat heme oxygenase-1 in complex with ferrous verdoheme
Descriptor: 5-OXA-PROTOPORPHYRIN IX CONTAINING FE, FORMIC ACID, Heme oxygenase 1
Authors:Sato, H, Sugishima, M, Fukuyama, K, Noguchi, M.
Deposit date:2008-11-21
Release date:2009-02-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of rat haem oxygenase-1 in complex with ferrous verdohaem: presence of a hydrogen-bond network on the distal side
Biochem.J., 419, 2009
2ZW6
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BU of 2zw6 by Molmil
Crystal structure of bleomycin N-acetyltransferase from bleomycin-producing Streptomyces verticillus ATCC15003
Descriptor: Bleomycin acetyltransferase, SULFATE ION
Authors:Oda, K, Matoba, Y, Sugiyama, M.
Deposit date:2008-12-01
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
3TQ9
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BU of 3tq9 by Molmil
Structure of the dihydrofolate reductase (folA) from Coxiella burnetii in complex with methotrexate
Descriptor: Dihydrofolate reductase, METHOTREXATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Franklin, M.C, Cassidy, M, Hillerich, B, Love, J.
Deposit date:2011-09-09
Release date:2011-11-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
2N59
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BU of 2n59 by Molmil
Solution Structure of R. palustris CsgH
Descriptor: Putative uncharacterized protein CsgH
Authors:Hawthorne, W.J, Taylor, J.D, Escalera-Maurer, A, Lambert, S, Koch, M, Scull, N, Sefer, L, Xu, Y, Matthews, S.J.
Deposit date:2015-07-13
Release date:2016-05-11
Method:SOLUTION NMR
Cite:Electrostatically-guided inhibition of Curli amyloid nucleation by the CsgC-like family of chaperones.
Sci Rep, 6, 2016
2ZWD
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BU of 2zwd by Molmil
Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 5 minutes
Descriptor: COPPER (I) ION, MelC, NITRATE ION, ...
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2008-12-03
Release date:2009-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystallographic evidence of drastic movement of a copper ion toward the substrate tyrosine for starting hydroxylation reaction of tyrosinase
To be Published
3TSP
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BU of 3tsp by Molmil
Crystal structure of E. coli HypF
Descriptor: MAGNESIUM ION, Transcriptional regulatory protein, ZINC ION
Authors:Petkun, S, Shi, R, Li, Y, Cygler, M.
Deposit date:2011-09-13
Release date:2011-12-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of Hydrogenase Maturation Protein HypF with Reaction Intermediates Shows Two Active Sites.
Structure, 19, 2011
6HYC
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BU of 6hyc by Molmil
The structure of full-length human phenylalanine hydroxylase in complex with the cofactor and negative regulator tetrahydrobiopterin
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, Phenylalanine-4-hydroxylase
Authors:Alcorlo Pages, M, Flydal, I.M.
Deposit date:2018-10-19
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Structure of full-length human phenylalanine hydroxylase in complex with tetrahydrobiopterin.
Proc.Natl.Acad.Sci.USA, 116, 2019
3TTP
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BU of 3ttp by Molmil
Structure of multiresistant HIV-1 protease in complex with darunavir
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Saskova, K.G, Brynda, J, Kozisek, M, Konvalinka, J, Rezacova, P.
Deposit date:2011-09-15
Release date:2012-09-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Thermodynamic and structural analysis of HIV protease resistance to darunavir - analysis of heavily mutated patient-derived HIV-1 proteases.
Febs J., 281, 2014
5RHD
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BU of 5rhd by Molmil
PanDDA analysis group deposition SARS-CoV-2 main protease fragment screen -- Crystal Structure of SARS-CoV-2 main protease in complex with SF013 (Mpro-x2193)
Descriptor: 1-[4-(methylsulfonyl)phenyl]piperazine, 3C-like proteinase, DIMETHYL SULFOXIDE
Authors:Fearon, D, Owen, C.D, Douangamath, A, Lukacik, P, Powell, A.J, Strain-Damerell, C.M, Resnick, E, Krojer, T, Gehrtz, P, Wild, C, Aimon, A, Brandao-Neto, J, Carbery, A, Dunnett, L, Skyner, R, Snee, M, Keeley, A, Keseru, G.M, London, N, Walsh, M.A, von Delft, F.
Deposit date:2020-05-16
Release date:2020-06-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystallographic and electrophilic fragment screening of the SARS-CoV-2 main protease.
Nat Commun, 11, 2020
6HR5
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BU of 6hr5 by Molmil
Structure of the S1_25 family sulfatase module of the rhamnosidase FA22250 from Formosa agariphila
Descriptor: Alpha-L-rhamnosidase/sulfatase (GH78), CALCIUM ION
Authors:Roret, T, Prechoux, A, Czjzek, M, Michel, G.
Deposit date:2018-09-26
Release date:2019-06-26
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.912 Å)
Cite:A marine bacterial enzymatic cascade degrades the algal polysaccharide ulvan.
Nat.Chem.Biol., 15, 2019
3BIJ
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BU of 3bij by Molmil
Crystal structure of protein GSU0716 from Geobacter sulfurreducens. Northeast Structural Genomics target GsR13
Descriptor: Uncharacterized protein GSU0716
Authors:Forouhar, F, Neely, H, Su, M, Seetharaman, J, Benach, J, Conover, K, Fang, Y, Xiao, R, Owen, L.A, Maglaqui, M, Cunningham, K, Baran, M.C, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-11-30
Release date:2007-12-11
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of protein GSU0716 from Geobacter sulfurreducens.
To be Published
4L1D
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BU of 4l1d by Molmil
Voltage-gated sodium channel beta3 subunit Ig domain
Descriptor: Sodium channel subunit beta-3
Authors:Namadurai, S, Weimhofer, M, Rajappa, R, Stott, K, Klingauf, J, Chirgadze, D.Y, Jackson, A.P.
Deposit date:2013-06-03
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure and Molecular Imaging of the Nav Channel beta 3 Subunit Indicates a Trimeric Assembly.
J.Biol.Chem., 289, 2014
3B13
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BU of 3b13 by Molmil
Crystal structure of the DHR-2 domain of DOCK2 in complex with Rac1 (T17N mutant)
Descriptor: Dedicator of cytokinesis protein 2, Ras-related C3 botulinum toxin substrate 1
Authors:Hanawa-Suetsugu, K, Kukimoto-Niino, M, Mishima-Tsumagari, C, Terada, T, Shirouzu, M, Fukui, Y, Yokoyama, S.
Deposit date:2011-06-24
Release date:2012-03-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.006 Å)
Cite:Structural basis for mutual relief of the Rac guanine nucleotide exchange factor DOCK2 and its partner ELMO1 from their autoinhibited forms.
Proc.Natl.Acad.Sci.USA, 109, 2012
3BJU
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BU of 3bju by Molmil
Crystal Structure of tetrameric form of human lysyl-tRNA synthetase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, LYSINE, ...
Authors:Guo, M, Yang, X.L, Schimmel, P.
Deposit date:2007-12-04
Release date:2008-02-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of tetrameric form of human lysyl-tRNA synthetase: Implications for multisynthetase complex formation
Proc.Natl.Acad.Sci.Usa, 105, 2008
1L18
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BU of 1l18 by Molmil
HYDROPHOBIC STABILIZATION IN T4 LYSOZYME DETERMINED DIRECTLY BY MULTIPLE SUBSTITUTIONS OF ILE 3
Descriptor: T4 LYSOZYME
Authors:Matsumura, M, Dao-Pin, S, Matthews, B.W.
Deposit date:1989-05-01
Release date:1990-01-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hydrophobic stabilization in T4 lysozyme determined directly by multiple substitutions of Ile 3.
Nature, 334, 1988

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數據於2024-10-09公開中

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