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PDB: 52230 results

7P5T
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BU of 7p5t by Molmil
Structure of CYP142 from Mycobacterium tuberculosis in complex with inhibitor MEK216
Descriptor: BROMIDE ION, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Snee, M, Kavanagh, M, Tunnicliffe, R, McLean, K, Levy, C, Munro, A.
Deposit date:2021-07-14
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of CYP142 from Mycobacterium tuberculosis in complex with inhibitor MEK216
To Be Published
4WYZ
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BU of 4wyz by Molmil
The crystal structure of the A109G mutant of RNase A in complex with 3'UMP
Descriptor: 3'-URIDINEMONOPHOSPHATE, Ribonuclease pancreatic
Authors:French, R.L, Gagne, D, Doucet, N, Simonovic, M.
Deposit date:2014-11-18
Release date:2015-11-18
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Perturbation of the Conformational Dynamics of an Active-Site Loop Alters Enzyme Activity.
Structure, 23, 2015
4WZO
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BU of 4wzo by Molmil
Complex of 70S ribosome with tRNA-fMet and mRNA
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G.
Deposit date:2014-11-20
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural insights into the translational infidelity mechanism.
Nat Commun, 6, 2015
4RIL
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BU of 4ril by Molmil
Structure of the amyloid forming segment, GAVVTGVTAVA, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 68-78, determined by electron diffraction
Descriptor: Alpha-synuclein
Authors:Rodriguez, J.A, Ivanova, M, Sawaya, M.R, Cascio, D, Reyes, F, Shi, D, Johnson, L, Guenther, E, Sangwan, S, Hattne, J, Nannenga, B, Brewster, A.S, Messerschmidt, M, Boutet, S, Sauter, N.K, Gonen, T, Eisenberg, D.S.
Deposit date:2014-10-06
Release date:2015-08-26
Last modified:2023-09-20
Method:ELECTRON CRYSTALLOGRAPHY (1.43 Å)
Cite:Structure of the toxic core of alpha-synuclein from invisible crystals.
Nature, 525, 2015
7AVB
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BU of 7avb by Molmil
Solution structure of the fluorogen-activating protein FAST in the apo state
Descriptor: FAST
Authors:Mineev, K.S, Goncharuk, S.A, Baranov, M.S.
Deposit date:2020-11-05
Release date:2021-04-28
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:NanoFAST: structure-based design of a small fluorogen-activating protein with only 98 amino acids.
Chem Sci, 12, 2021
7AVA
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BU of 7ava by Molmil
Solution structure of the fluorogen-activating protein FAST in complex with the ligand N871b
Descriptor: (5~{Z})-5-[(2-methoxy-4-oxidanyl-phenyl)methylidene]-3-methyl-2-[(~{E})-2-pyridin-4-ylethenyl]imidazol-4-one, FAST
Authors:Mineev, K.S, Goncharuk, S.A, Baranov, M.S.
Deposit date:2020-11-05
Release date:2021-04-28
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:NanoFAST: structure-based design of a small fluorogen-activating protein with only 98 amino acids.
Chem Sci, 12, 2021
4X5V
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BU of 4x5v by Molmil
Crystal structure of the post-catalytic nick complex of DNA polymerase lambda with a templating A and incorporated 8-oxo-dGMP
Descriptor: CITRIC ACID, DNA (5'-D(*CP*AP*GP*TP*AP*CP*(8OG))-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Burak, M.J, Guja, K.E, Garcia-Diaz, M.
Deposit date:2014-12-05
Release date:2015-10-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Nucleotide binding interactions modulate dNTP selectivity and facilitate 8-oxo-dGTP incorporation by DNA polymerase lambda.
Nucleic Acids Res., 43, 2015
5Z3A
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BU of 5z3a by Molmil
Glycosidase Wild Type
Descriptor: CITRIC ACID, GLYCEROL, Glycoside hydrolase 15-related protein
Authors:Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
Deposit date:2018-01-05
Release date:2019-05-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
8SUV
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BU of 8suv by Molmil
CHIP-TPR in complex with the C-terminus of CHIC2
Descriptor: Cysteine-rich hydrophobic domain-containing protein 2, E3 ubiquitin-protein ligase CHIP, SULFATE ION
Authors:Cupo, A.R, McDermott, L.E, DeSilva, A.R, Callahan, M, Nix, J.C, Gestwicki, J.E, Page, R.C.
Deposit date:2023-05-13
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Interaction with the membrane-anchored protein CHIC2 constrains the ubiquitin ligase activity of CHIP
Biorxiv, 2023
4WT1
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BU of 4wt1 by Molmil
Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G.
Deposit date:2014-10-29
Release date:2015-06-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural insights into the translational infidelity mechanism.
Nat Commun, 6, 2015
4WYN
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BU of 4wyn by Molmil
The crystal structure of the A109G mutant of RNase A
Descriptor: Ribonuclease pancreatic
Authors:French, R.L, Gagne, D, Doucet, N, Simonovic, M.
Deposit date:2014-11-17
Release date:2015-11-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Perturbation of the Conformational Dynamics of an Active-Site Loop Alters Enzyme Activity.
Structure, 23, 2015
4X1B
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BU of 4x1b by Molmil
Human serum transferrin with ferric ion bound at the C-lobe only
Descriptor: FE (III) ION, GLYCEROL, MALONATE ION, ...
Authors:Wang, M, Zhang, H, Sun, H.
Deposit date:2014-11-24
Release date:2015-04-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:"Anion clamp" allows flexible protein to impose coordination geometry on metal ions
Chem.Commun.(Camb.), 51, 2015
4X2M
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BU of 4x2m by Molmil
Structure of Mtr2
Descriptor: Mtr2
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-11-26
Release date:2015-07-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of the principal mRNA-export factor Mex67-Mtr2 from Chaetomium thermophilum.
Acta Crystallogr.,Sect.F, 71, 2015
8HUA
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BU of 8hua by Molmil
Serial synchrotron crystallography structure of ba3-type cytochrome c oxidase from Thermus thermophilus using a goniometer compatible flow-cell
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Ghosh, S, Zoric, D, Bjelcic, M, Johannesson, J, Sandelin, E, Branden, G, Neutze, R.
Deposit date:2022-12-22
Release date:2023-03-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:A simple goniometer-compatible flow cell for serial synchrotron X-ray crystallography.
J.Appl.Crystallogr., 56, 2023
4X69
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BU of 4x69 by Molmil
Crystal structure of OP0595 complexed with CTX-M-44
Descriptor: (2S,5R)-N-(2-aminoethoxy)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,2-ETHANEDIOL, Beta-lactamase Toho-1
Authors:Yamada, M, Watanabe, T.
Deposit date:2014-12-07
Release date:2015-07-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:OP0595, a new diazabicyclooctane: mode of action as a serine beta-lactamase inhibitor, antibiotic and beta-lactam 'enhancer'
J.Antimicrob.Chemother., 70, 2015
8SVE
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BU of 8sve by Molmil
Structure of Monomeric Interleukin-10 Grafted into and Antibody CDR
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Fab Heavy chain, ...
Authors:DiDonato, M, Spraggon, G.
Deposit date:2023-05-16
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Novel Interleukin-10 Antibody Graft to Treat Inflammatory Bowel Disease.
To Be Published
6A3H
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BU of 6a3h by Molmil
2-DEOXY-2-FLURO-B-D-CELLOTRIOSYL/ENZYME INTERMEDIATE COMPLEX OF THE ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHEARANS AT 1.6 ANGSTROM RESOLUTION
Descriptor: ENDOGLUCANASE, GLYCEROL, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-2-deoxy-2-fluoro-alpha-D-glucopyranose
Authors:Davies, G.J, Varrot, A, Dauter, M, Brzozowski, A.M, Schulein, M, Mackenzie, L, Withers, S.G.
Deposit date:1998-07-22
Release date:1999-07-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Snapshots along an enzymatic reaction coordinate: analysis of a retaining beta-glycoside hydrolase.
Biochemistry, 37, 1998
6GV8
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BU of 6gv8 by Molmil
Characterization of extracellular matrix binding protein- (Embp)-mediated Staphylococcus epidermidis adherence to fibronectin
Descriptor: Hyperosmolarity resistance protein Emb
Authors:Buettner, H, Rohde, H, Perbandt, M.
Deposit date:2018-06-20
Release date:2019-07-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.394 Å)
Cite:A Giant Extracellular Matrix Binding Protein of Staphylococcus epidermidis Binds Surface-Immobilized Fibronectin via a Novel Mechanism.
Mbio, 11, 2020
4X0T
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BU of 4x0t by Molmil
Structure ALDH7A1 inactivated by 4-diethylaminobenzaldehyde and complexed with NAD+
Descriptor: 4-(diethylamino)benzaldehyde, Alpha-aminoadipic semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Luo, M, Tanner, J.J.
Deposit date:2014-11-23
Release date:2015-01-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Diethylaminobenzaldehyde Is a Covalent, Irreversible Inactivator of ALDH7A1.
Acs Chem.Biol., 10, 2015
4X0U
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BU of 4x0u by Molmil
Structure ALDH7A1 inactivated by 4-diethylaminobenzaldehyde
Descriptor: 4-(diethylamino)benzaldehyde, Alpha-aminoadipic semialdehyde dehydrogenase, MAGNESIUM ION
Authors:Luo, M, Tanner, J.J.
Deposit date:2014-11-23
Release date:2015-01-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Diethylaminobenzaldehyde Is a Covalent, Irreversible Inactivator of ALDH7A1.
Acs Chem.Biol., 10, 2015
2R9A
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BU of 2r9a by Molmil
Crystal structure of human XLF
Descriptor: Non-homologous end-joining factor 1
Authors:Andres, S.N, Junop, M.S.
Deposit date:2007-09-12
Release date:2008-01-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Human XLF: A Twist in Nonhomologous DNA End-Joining
Mol.Cell, 28
4X2H
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BU of 4x2h by Molmil
Sac3N peptide bound to Mex67:Mtr2
Descriptor: Putative mRNA export protein, Putative uncharacterized protein, SER-SER-VAL-PHE-GLY-ALA-PRO-ALA
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-11-26
Release date:2015-06-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Characterization of the Chaetomium thermophilum TREX-2 Complex and its Interaction with the mRNA Nuclear Export Factor Mex67:Mtr2.
Structure, 23, 2015
4X4J
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BU of 4x4j by Molmil
Structural and Functional Studies of BexE: Insights into Oxidation During BE-7585A Biosynthesis
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative oxygenase, SULFATE ION
Authors:Tsai, S.-C, Jackson, D.R, Patel, A, Barajas, J.F, Rohr, J, Yu, X, Liu, H.-W, Sasaki, E, Calveras, J, Metsa-Ketela, M.
Deposit date:2014-12-02
Release date:2015-12-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural and Functional Studies of BexE: Insights into Oxidation During BE-7585A Biosynthesis
To Be Published
7X9U
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BU of 7x9u by Molmil
Type-II KH motif of human mitochondrial RbfA
Descriptor: Putative ribosome-binding factor A, mitochondrial
Authors:Kuwasako, K, Suzuki, S, Furue, M, Takizawa, M, Takahashi, M, Tsuda, K, Nagata, T, Watanabe, S, Tanaka, A, Kobayashi, N, Kigawa, T, Guntert, P, Shirouzu, M, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2022-03-16
Release date:2023-01-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:1 H, 13 C, and 15 N resonance assignments and solution structures of the KH domain of human ribosome binding factor A, mtRbfA, involved in mitochondrial ribosome biogenesis.
Biomol.Nmr Assign., 16, 2022
4XBA
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BU of 4xba by Molmil
Hnt3
Descriptor: Aprataxin-like protein, GLYCEROL, GUANOSINE, ...
Authors:Jacewicz, A, Chauleau, M, Shuman, S.
Deposit date:2014-12-16
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:DNA3'pp5'G de-capping activity of aprataxin: effect of cap nucleoside analogs and structural basis for guanosine recognition.
Nucleic Acids Res., 43, 2015

227111

数据于2024-11-06公开中

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