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PDB: 51630 件

8C3K
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PaaR2 N-terminal domin in complex with nanobody 33
分子名称: Nanobody 33, Phage repressor protein CI
著者Loris, R, Prolic-Kalinsek, M.
登録日2022-12-26
公開日2024-01-10
実験手法X-RAY DIFFRACTION (1.74972475 Å)
主引用文献PaaR2, the CI equivalent in Escherichia coli O157:H7 cryptic prophage CP-933P
To be published
5HKH
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Crystal structure of Ufm1 in complex with UBA5
分子名称: ASP-ASN-GLU-TRP-GLY-ILE-GLU-LEU-VAL, Ubiquitin-fold modifier 1
著者Huber, J, Doetsch, V, Rogov, V.V, Akutsu, M.
登録日2016-01-14
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and Functional Analysis of a Novel Interaction Motif within UFM1-activating Enzyme 5 (UBA5) Required for Binding to Ubiquitin-like Proteins and Ufmylation.
J.Biol.Chem., 291, 2016
5O7D
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BU of 5o7d by Molmil
The X-ray structure of human R38M phosphoglycerate kinase 1 mutant
分子名称: ADENOSINE-5'-DIPHOSPHATE, Phosphoglycerate kinase 1
著者Ilari, A, Fiorillo, A, Cipollone, A, Petrosino, M.
登録日2017-06-08
公開日2018-06-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献The phosphoglycerate kinase 1 variants found in carcinoma cells display different catalytic activity and conformational stability compared to the native enzyme.
PLoS ONE, 13, 2018
1FZQ
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BU of 1fzq by Molmil
CRYSTAL STRUCTURE OF MURINE ARL3-GDP
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 3, AMMONIUM ION, ...
著者Hillig, R.C, Hanzal-Bayer, M, Linari, M, Becker, J, Wittinghofer, A, Renault, L.
登録日2000-10-04
公開日2000-12-06
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and biochemical properties show ARL3-GDP as a distinct GTP binding protein.
Structure Fold.Des., 8, 2000
6HA8
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Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Crowe-McAuliffe, C, Graf, M, Huter, P, Abdelshahid, M, Novacek, J, Wilson, D.N.
登録日2018-08-07
公開日2018-08-29
最終更新日2021-01-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis for antibiotic resistance mediated by theBacillus subtilisABCF ATPase VmlR.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6G75
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Crystal structure of the common ancestor of haloalkane dehalogenases and Renilla luciferase (AncHLD-RLuc)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Common ancestor of haloalkane dehalogenase and Renilla luciferase (AncHLD-RLuc), ...
著者Chaloupkova, R, Waterman, J, Marek, M, Damborsky, J.
登録日2018-04-04
公開日2019-04-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.391 Å)
主引用文献Light-Emitting Dehalogenases: Reconstruction of Multifunctional Biocatalysts
Acs Catalysis, 2019
6G82
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Serum paraoxonase-1 by directed evolution with the L69S/H115W/F222S mutations
分子名称: CALCIUM ION, Serum paraoxonase-1 by directed evolution with the L69S/H115W/F222S mutations
著者Ben-David, M, Sussman, J.L, Tawfik, D.S.
登録日2018-04-07
公開日2019-03-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Enzyme Evolution: An Epistatic Ratchet versus a Smooth Reversible Transition.
Mol.Biol.Evol., 37, 2020
2VAN
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BU of 2van by Molmil
Nucleotidyl Transfer Mechanism of Mismatched dNTP Incorporation by DNA Polymerase b by Structural and Kinetic Analyses
分子名称: DNA POLYMERSE BETA
著者Chan, H, Chou, C, Tang, K, Niebuhr, M, Tung, C, Tsai, M.
登録日2007-09-03
公開日2008-04-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mismatched Dntp Incorporation by DNA Polymerase Beta Does not Proceed Via Globally Different Conformational Pathways.
Nucleic Acids Res., 36, 2008
6GAQ
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BU of 6gaq by Molmil
Crystal structure of oxidised Flavodoxin 2 from Bacillus cereus
分子名称: CALCIUM ION, FLAVIN MONONUCLEOTIDE, Flavodoxin, ...
著者Lofstad, M, Gudim, I, Hersleth, H.-P.
登録日2018-04-12
公開日2018-09-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Characterization of Different Flavodoxin Reductase-Flavodoxin (FNR-Fld) Interactions Reveals an Efficient FNR-Fld Redox Pair and Identifies a Novel FNR Subclass.
Biochemistry, 57, 2018
6HGY
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BU of 6hgy by Molmil
CRYSTAL STRUCTURE OF CATHEPSIN K WITH N-DESMETHYL THALASSOSPIRAMIDE C
分子名称: Cathepsin K, THALASSOSPIRAMIDE C
著者Zakarian, A, Buckman, B.O, Adler, M, Griessner, A, Blaesse, M.
登録日2018-08-23
公開日2019-06-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Total Synthesis of Covalent Cysteine Protease Inhibitor N-Desmethyl Thalassospiramide C and Crystallographic Evidence for Its Mode of Action.
Org.Lett., 21, 2019
5NXG
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BU of 5nxg by Molmil
Carbonic Anhydrase II Inhibitor RA1
分子名称: 2-chloranyl-4-nitro-~{N}-(4-sulfamoylphenyl)benzamide, Carbonic anhydrase 2, ZINC ION
著者Brynda, J, Rezacova, P, Horejsi, M, Fanfrlik, J.
登録日2017-05-10
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Ranking Power of the SQM/COSMO Scoring Function on Carbonic Anhydrase II-Inhibitor Complexes.
Chemphyschem, 19, 2018
5NXP
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Carbonic Anhydrase II Inhibitor RA7
分子名称: 2-[methyl(phenyl)amino]-~{N}-(4-sulfamoylphenyl)ethanamide, Carbonic anhydrase 2, ZINC ION
著者Brynda, J, Rezacova, P, Horejsi, M, Fanfrlik, J.
登録日2017-05-10
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Ranking Power of the SQM/COSMO Scoring Function on Carbonic Anhydrase II-Inhibitor Complexes.
Chemphyschem, 19, 2018
6TWT
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BU of 6twt by Molmil
Crystal structure of N-terminally truncated NDM-1 metallo-beta-lactamase
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Imiolczyk, B, Czyrko-Horczak, J, Brzezinski, K, Jaskolski, M.
登録日2020-01-13
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Flexible loops of New Delhi metallo-beta-lactamase modulate its activity towards different substrates.
Int.J.Biol.Macromol., 158, 2020
5NXW
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BU of 5nxw by Molmil
Carbonic Anhydrase II Inhibitor RA9
分子名称: 2-[(5-azanyl-1,3,4-thiadiazol-2-yl)sulfanyl]-~{N}-(4-sulfamoylphenyl)ethanamide, Carbonic anhydrase 2, ZINC ION
著者Brynda, J, Rezacova, P, Horejsi, M, Fanfrlik, J.
登録日2017-05-11
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Ranking Power of the SQM/COSMO Scoring Function on Carbonic Anhydrase II-Inhibitor Complexes.
Chemphyschem, 19, 2018
2V5V
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BU of 2v5v by Molmil
W57E Flavodoxin from Anabaena
分子名称: FLAVIN MONONUCLEOTIDE, FLAVODOXIN, MAGNESIUM ION
著者Herguedas, B, Martinez-Julvez, M, Perez-Dorado, I, Goni, G, Medina, M, Hermoso, J.A.
登録日2007-07-10
公開日2007-10-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Tuning of the Fmn Binding and Oxido-Reduction Properties by Neighboring Side Chains in Anabaena Flavodoxin.
Arch.Biochem.Biophys., 467, 2007
6HRF
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BU of 6hrf by Molmil
Straight filament from sporadic Alzheimer's disease brain
分子名称: Microtubule-associated protein tau
著者Falcon, B, Zhang, W, Schweighauser, M, Murzin, A.G, Vidal, R, Garringer, H.J, Ghetti, B, Scheres, S.H.W, Goedert, M.
登録日2018-09-26
公開日2018-10-10
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Tau filaments from multiple cases of sporadic and inherited Alzheimer's disease adopt a common fold.
Acta Neuropathol., 136, 2018
8GDK
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BU of 8gdk by Molmil
Crystal Structure of HIV-1 LM/HT CLADE A/E CRF01 GP120 Core in Complex with TFH-II-151
分子名称: (3S,5R)-N-(4-chloro-3-fluorophenyl)-5-(hydroxymethyl)-1-[(3R,5S)-3,4,5-trimethylpiperazine-1-carbonyl]piperidine-3-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Tolbert, W.D, Nguyen, D.N, Pazgier, M.
登録日2023-03-06
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal Structure of HIV-1 LM/HT CLADE A/E CRF01 GP120 Core in Complex with TFH-II-151
To Be Published
8GI6
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BU of 8gi6 by Molmil
Crystal structure of RhoA mutant L69R complexed with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transforming protein RhoA
著者Chen, X, Qian, X, Chandravanshi, M, Lowy, D.R, Walters, K.J.
登録日2023-03-13
公開日2024-03-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Ras-like GTPases mutant structures
To be published
6HUT
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BU of 6hut by Molmil
GFP8 - a stabilized variant of cycle-3 GFP
分子名称: Green fluorescent protein
著者Petek, M, Rangel Pereira, M.
登録日2018-10-09
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献GFP8 - a stabilized variant of cycle-3 GFP
To Be Published
6G5T
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BU of 6g5t by Molmil
Myoglobin H64V/V68A in the resting state, 1.5 Angstrom resolution
分子名称: 1,2-ETHANEDIOL, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Tinzl, M, Hayashi, T, Mori, T, Hilvert, D.
登録日2018-03-30
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme
Nat Catal, 1, 2018
5FLF
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DISEASE LINKED MUTATION IN FGFR
分子名称: ACETATE ION, CHLORIDE ION, FIBROBLAST GROWTH FACTOR RECEPTOR 1, ...
著者Thiyagarajan, N, Bunney, T.D, Katan, M.
登録日2015-10-26
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Landscape of Activating Cancer Mutations in Fgfr Kinases and Their Differential Responses to Inhibitors in Clinical Use.
Oncotarget, 7, 2016
5NSD
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BU of 5nsd by Molmil
Co-crystal structure of NAMPT dimer with KPT-9274
分子名称: (~{E})-3-(6-azanylpyridin-3-yl)-~{N}-[[5-[4-[4,4-bis(fluoranyl)piperidin-1-yl]carbonylphenyl]-7-(4-fluorophenyl)-1-benzofuran-2-yl]methyl]prop-2-enamide, GLYCEROL, Nicotinamide phosphoribosyltransferase, ...
著者Neggers, J.E, Kwanten, B, Dierckx, T, Noguchi, H, Voet, A, Vercruysse, T, Baloglu, E, Senapedis, W, Jacquemyn, M, Daelemans, D.
登録日2017-04-26
公開日2018-02-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.046 Å)
主引用文献Target identification of small molecules using large-scale CRISPR-Cas mutagenesis scanning of essential genes.
Nat Commun, 9, 2018
6UCM
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BU of 6ucm by Molmil
Transcription factor DeltaFosB bZIP domain self-assembly, type-II crystal
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Protein fosB
著者Yin, Z, Machius, M, Rudenko, G.
登録日2019-09-16
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.424 Å)
主引用文献Self-assembly of the bZIP transcription factor Delta FosB.
Curr Res Struct Biol, 2, 2020
6YZ5
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BU of 6yz5 by Molmil
H11-D4 complex with SARS-CoV-2 RBD
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Naismith, J.H, Huo, J, Mikolajek, H, Ward, P, Dumoux, M, Owens, R.J, Le Bas, A.
登録日2020-05-06
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献H11-D4 complex with SARS-CoV-2 RBD
To Be Published
8GDJ
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BU of 8gdj by Molmil
Crystal Structure of HIV-1 LM/HT CLADE A/E CRF01 GP120 Core in Complex with TFH-II-128
分子名称: (3S,5R)-N-(4-chloro-3-fluorophenyl)-5-(hydroxymethyl)-1-(4-methylpiperazine-1-carbonyl)piperidine-3-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Nguyen, D.N, Tolbert, W.D, Pazgier, M.
登録日2023-03-06
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Crystal Structure of HIV-1 LM/HT CLADE A/E CRF01 GP120 Core in Complex with TFH-II-128
To Be Published

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件を2024-08-28に公開中

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