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PDB: 51938 件

3JCT
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Cryo-em structure of eukaryotic pre-60S ribosomal subunits
分子名称: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
著者Wu, S, Kumcuoglu, B, Yan, K.G, Brown, H, Zhang, Y.X, Tan, D, Gamalinda, M, Yuan, Y, Li, Z.F, Jakovljevic, J, Ma, C.Y, Lei, J.L, Dong, M.Q, Woolford Jr, J.L, Gao, N.
登録日2016-03-09
公開日2016-06-01
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes
Nature, 534, 2016
3JT1
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Legionella pneumophila glucosyltransferase Lgt1, UDP-bound form
分子名称: Putative uncharacterized protein, URIDINE-5'-DIPHOSPHATE
著者Lu, W, Du, J, Belyi, Y, Stahl, M, Zivilikidis, T, Gerhardt, S, Aktories, K, Einsle, O.
登録日2009-09-11
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of the Action of Glucosyltransferase Lgt1 from Legionella pneumophila.
J.Mol.Biol., 2009
3JTJ
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3-deoxy-manno-octulosonate cytidylyltransferase from Yersinia pestis
分子名称: 3-deoxy-manno-octulosonate cytidylyltransferase, IMIDAZOLE
著者Osipiuk, J, Zhou, M, Grimshaw, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-09-12
公開日2009-09-22
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献X-ray crystal structure of 3-deoxy-manno-octulosonate cytidylyltransferase from Yersinia pestis.
To be Published
8QTK
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Crystal structure of CBL-b in complex with an allosteric inhibitor (compound 31)
分子名称: 3-[3-[3-methyl-1-(4-methyl-1,2,4-triazol-3-yl)cyclobutyl]phenyl]-1-[(1S)-1-(1-methylpyrazol-4-yl)ethyl]-5-(trifluoromethyl)pyridin-2-one, E3 ubiquitin-protein ligase CBL-B, SODIUM ION, ...
著者Schimpl, M.
登録日2023-10-12
公開日2024-01-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.873 Å)
主引用文献Discovery, Optimization, and Biological Evaluation of Arylpyridones as Cbl-b Inhibitors.
J.Med.Chem., 67, 2024
3JUQ
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Crystal Structure of PhzA/B from Burkholderia cepacia R18194 cocrystallized with 2 mM racemic 5-bromo-2-(piperidin-3-ylamino)benzoic acid
分子名称: 5-bromo-2-[(3R)-piperidin-3-ylamino]benzoic acid, 5-bromo-2-[(3S)-piperidin-3-ylamino]benzoate, Phenazine biosynthesis protein A/B
著者Mentel, M, Breinbauer, R, Blankenfeldt, W.
登録日2009-09-15
公開日2009-09-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The Active Site of an Enzyme Can Host Both Enantiomers of a Racemic Ligand Simultaneously
Angew.Chem.Int.Ed.Engl., 48, 2009
6NNB
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Solution structure of the Tudor domain of PSHCP
分子名称: Prochlorococcus/Synechococcus Hyper Conserved Protein
著者Bauer, K.M, Pelligrini, M, Ragusa, M.J.
登録日2019-01-14
公開日2019-08-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The structure of a highly-conserved picocyanobacterial protein reveals a Tudor domain with an RNA-binding function.
J.Biol.Chem., 294, 2019
3S8H
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Structure of dihydrodipicolinate synthase complexed with 3-Hydroxypropanoic acid(HPA)at 2.70 A resolution
分子名称: 3-HYDROXY-PROPANOIC ACID, Dihydrodipicolinate synthase
著者Kumar, M, Kaur, N, Kumar, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2011-05-28
公開日2011-06-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of dihydrodipicolinate synthase complexed with 3-Hydroxypropanoic acid(HPA)at 2.70 A resolution
TO BE PUBLISHED
3JQ5
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Phospholipase A2 Prevents the Aggregation of Amyloid Beta Peptides: Crystal Structure of the Complex of Phospholipase A2 with Octapeptide Fragment of Amyloid Beta Peptide, Asp-Ala-Glu-Phe-Arg-His-Asp-Ser at 2 A Resolution
分子名称: Amyloid Beta Peptide, CALCIUM ION, Phospholipase A2 isoform 3
著者Mirza, Z, Vikram, G, Singh, N, Sinha, M, Bhushan, A, Sharma, S, Srinivasan, A, Kaur, P, Singh, T.P.
登録日2009-09-06
公開日2009-09-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Phospholipase A2 Prevents the Aggregation of Amyloid Beta Peptides: Crystal Structure of the Complex of Phospholipase A2 with Octapeptide Fragment of Amyloid Beta Peptide, Asp-Ala-Glu-Phe-Arg-His-Asp-Ser at 2 A Resolution
To be Published
3JXP
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Crystal Structure of the Coenzyme PQQ Synthesis Protein (PqqB) from Pseudomonas putida
分子名称: CHLORIDE ION, Coenzyme PQQ synthesis protein B, ZINC ION
著者Metlitzky, M, Schwarzenbacher, R.
登録日2009-09-21
公開日2010-09-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of PqqB from Pseudomonas putida at 2.2 A resolution
J. Biophys. Chem., 3, 2012
9FEH
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Crystal structure of SARS-CoV-2 nsp14 methyltransferase domain in complex with the STM957 inhibitor
分子名称: Transcription factor ETV6,Guanine-N7 methyltransferase nsp14, ZINC ION, ~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-pyridin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-3-cyano-~{N}-ethyl-4-methoxy-benzenesulfonamide
著者Zilecka, E, Klima, M, Boura, E.
登録日2024-05-20
公開日2024-08-28
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure of SARS-CoV-2 MTase nsp14 with the inhibitor STM957 reveals inhibition mechanism that is shared with a poxviral MTase VP39.
J Struct Biol X, 10, 2024
6ZHF
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Calcium ATPase-1 from Listeria monocytogenes in complex with BeF
分子名称: BERYLLIUM TRIFLUORIDE ION, Calcium-transporting ATPase, MAGNESIUM ION
著者Basse Hansen, S, Dyla, M, Neumann, C, Quistgaard, E.M.H, Lauwring Andersen, J, Kjaergaard, M, Nissen, P.
登録日2020-06-23
公開日2021-05-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献The Crystal Structure of the Ca 2+ -ATPase 1 from Listeria monocytogenes reveals a Pump Primed for Dephosphorylation.
J.Mol.Biol., 433, 2021
9FAB
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Additional cryo-EM structure of cardiac amyloid AL59 - bent polymorph
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Monoclonal immunoglobulin light chains (LC)
著者Schulte, T, Speranzini, V, Chaves-Sanjuan, A, Milazzo, M, Ricagno, S.
登録日2024-05-10
公開日2024-08-14
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Additional cryo-EM structure of cardiac amyloid AL59 - bent polymorph
To be published
3JYN
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Crystal structures of Pseudomonas syringae pv. Tomato DC3000 quinone oxidoreductase complexed with NADPH
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Quinone oxidoreductase
著者Pan, X, Zhang, H, Gao, Y, Li, M, Chang, W.
登録日2009-09-22
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structures of Pseudomonas syringae pv. tomato DC3000 quinone oxidoreductase and its complex with NADPH
Biochem.Biophys.Res.Commun., 390, 2009
9FAA
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Cryo-EM structure of cardiac collagen-associated amyloid AL59
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Monoclonal immunoglobulin light chains (LC)
著者Schulte, T, Speranzini, V, Chaves-Sanjuan, A, Milazzo, M, Ricagno, S.
登録日2024-05-10
公開日2024-07-17
最終更新日2024-08-14
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Helical superstructures between amyloid and collagen in cardiac fibrils from a patient with AL amyloidosis.
Nat Commun, 15, 2024
6ZHG
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Ca2+-ATPase from Listeria Monocytogenes in complex with AlF
分子名称: Calcium-transporting ATPase, MAGNESIUM ION, TETRAFLUOROALUMINATE ION
著者Basse Hansen, S, Dyla, M, Neumann, C, Quistgaard, E.M.H, Lauwring Andersen, J, Kjaergaard, M, Nissen, P.
登録日2020-06-23
公開日2021-05-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献The Crystal Structure of the Ca 2+ -ATPase 1 from Listeria monocytogenes reveals a Pump Primed for Dephosphorylation.
J.Mol.Biol., 433, 2021
9FAC
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BU of 9fac by Molmil
Additional cryo-EM structure of cardiac amyloid AL59 - mixed polymorph
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Monoclonal immunoglobulin light chains (LC)
著者Schulte, T, Speranzini, V, Chaves-Sanjuan, A, Milazzo, M, Ricagno, S.
登録日2024-05-10
公開日2024-08-14
最終更新日2024-08-28
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Helical superstructures between amyloid and collagen in cardiac fibrils from a patient with AL amyloidosis.
Nat Commun, 15, 2024
2E0M
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BU of 2e0m by Molmil
Mutant Human Ribonuclease 1 (T24L, Q28L, R31L, R32L)
分子名称: CADMIUM ION, CHLORIDE ION, Ribonuclease
著者Yamada, H, Tamada, T, Kosaka, M, Kuroki, R.
登録日2006-10-10
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献'Crystal lattice engineering,' an approach to engineer protein crystal contacts by creating intermolecular symmetry: crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines
Protein Sci., 16, 2007
3K09
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Crystal structure of the phosphorylation-site mutant S431D of the KaiC circadian clock protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
著者Pattanayek, R, Egli, M, Pattanayek, S.
登録日2009-09-24
公開日2010-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3JUI
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Crystal Structure of the C-terminal Domain of Human Translation Initiation Factor eIF2B epsilon Subunit
分子名称: GLYCEROL, Translation initiation factor eIF-2B subunit epsilon
著者Wei, J, Xu, H, Zhang, C, Wang, M, Gao, F, Gong, W.
登録日2009-09-15
公開日2009-10-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the C-terminal Domain of Human Translation Initiation Factor eIF2B epsilon Subunit
To be published
3JUN
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Crystal Structure of PhzA/B from Burkholderia cepacia R18194 in simultaneous complex with racemic 5-bromo-2-(piperidin-3-ylamino)benzoic acid
分子名称: 5-bromo-2-[(3R)-piperidin-3-ylamino]benzoic acid, 5-bromo-2-[(3S)-piperidin-3-ylamino]benzoate, Phenazine biosynthesis protein A/B
著者Mentel, M, Breinbauer, R, Blankenfeldt, W.
登録日2009-09-15
公開日2009-09-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Active Site of an Enzyme Can Host Both Enantiomers of a Racemic Ligand Simultaneously
Angew.Chem.Int.Ed.Engl., 48, 2009
3B8O
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Structure of WzzE- Bacterial Polysaccharide Co-polymerase
分子名称: Lipopolysaccharide biosynthesis protein wzzE
著者Tocilj, A, Matte, A, Cygler, M.
登録日2007-11-01
公開日2008-01-22
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Bacterial polysaccharide co-polymerases share a common framework for control of polymer length
Nat.Struct.Mol.Biol., 15, 2008
3SDG
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Ethionamide Boosters Part 2: Combining Bioisosteric Replacement and Structure-Based Drug Design to Solve Pharmacokinetic Issues in a Series of Potent 1,2,4-Oxadiazole EthR Inhibitors.
分子名称: 4,4,4-trifluoro-1-{4-[3-(1,3-thiazol-2-yl)-1,2,4-oxadiazol-5-yl]piperidin-1-yl}butan-1-one, HTH-type transcriptional regulator EthR
著者Flipo, M, Desroses, M, Lecat-Guillet, N, Villemagne, B, Blondiaux, N, Leroux, F, Piveteau, C, Mathys, V, Flament, M.P, Siepmann, J, Villeret, V, Wohlkonig, A, Wintjens, R, Soror, S.H, Christophe, T, Jeon, H.K, Locht, C, Brodin, P, D prez, B, Baulard, A.R, Willand, N.
登録日2011-06-09
公開日2011-12-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Ethionamide Boosters. 2. Combining Bioisosteric Replacement and Structure-Based Drug Design To Solve Pharmacokinetic Issues in a Series of Potent 1,2,4-Oxadiazole EthR Inhibitors.
J.Med.Chem., 55, 2012
5CKA
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Human beta-2 microglobulin double mutant W60G-N83V
分子名称: ACETATE ION, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
著者Sala, B.M, De Rosa, M, Bolognesi, M, Ricagno, S.
登録日2015-07-15
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Rational design of mutations that change the aggregation rate of a protein while maintaining its native structure and stability.
Sci Rep, 6, 2016
3K2L
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Crystal Structure of dual-specificity tyrosine phosphorylation regulated kinase 2 (DYRK2)
分子名称: CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 2, SODIUM ION, ...
著者Filippakopoulos, P, Myrianthopoulos, V, Soundararajan, M, Krojer, T, Hapka, E, Fedorov, O, Berridge, G, Wang, J, Shrestha, L, Pike, A.C.W, Ugochukwu, E, von Delft, F, Arrowsmith, C.H, Edwards, A, Weigelt, J, Bountra, C, Mikros, E, Knapp, S, Structural Genomics Consortium (SGC)
登録日2009-09-30
公開日2009-10-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structures of Down Syndrome Kinases, DYRKs, Reveal Mechanisms of Kinase Activation and Substrate Recognition.
Structure, 21, 2013
5CKG
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Human beta-2 microglobulin mutant V85E
分子名称: ACETATE ION, Beta-2-microglobulin, GLYCEROL
著者Sala, B.M, De Rosa, M, Bolognesi, M, Ricagno, S.
登録日2015-07-15
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Rational design of mutations that change the aggregation rate of a protein while maintaining its native structure and stability.
Sci Rep, 6, 2016

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