Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51630 件

6AYH
DownloadVisualize
BU of 6ayh by Molmil
Salmonella enterica GusR
分子名称: 4-nitrophenyl beta-D-glucopyranosiduronic acid, GLYCEROL, TetR family transcriptional regulator
著者Little, M.S, Pellock, S.J.
登録日2017-09-08
公開日2017-12-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for the regulation of beta-glucuronidase expression by human gut Enterobacteriaceae.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6UOG
DownloadVisualize
BU of 6uog by Molmil
Asparaginase II from Escherichia coli
分子名称: ASPARTIC ACID, L-asparaginase 2
著者Araujo, T.S, Almeida, M.S, Lima, L.M.T.R.
登録日2019-10-14
公開日2020-10-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Biophysical characterization of two commercially available preparations of the drug containing Escherichia coli L-Asparaginase 2.
Biophys.Chem., 271, 2021
7NKG
DownloadVisualize
BU of 7nkg by Molmil
Methyl-coenzyme M reductase from Methermicoccus shengliensis at 1.6-A resolution
分子名称: 1-THIOETHANESULFONIC ACID, Coenzyme B, FACTOR 430, ...
著者Mueller, M, Wagner, T.
登録日2021-02-18
公開日2021-05-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Insights into the Methane-Generating Enzyme from a Methoxydotrophic Methanogen Reveal a Restrained Gallery of Post-Translational Modifications.
Microorganisms, 9, 2021
6OBR
DownloadVisualize
BU of 6obr by Molmil
PP1 Y134A in complex with Microcystin LR
分子名称: CHLORIDE ION, MANGANESE (II) ION, Microcystin LR, ...
著者Choy, M.S, Moon, T.M, Bray, J.A, Archuleta, T.L, Shi, W, Peti, W, Page, R.
登録日2019-03-21
公開日2019-09-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献SDS22 selectively recognizes and traps metal-deficient inactive PP1.
Proc.Natl.Acad.Sci.USA, 116, 2019
7MX5
DownloadVisualize
BU of 7mx5 by Molmil
Crystal structure of TolB from Acinetobacter baumannii
分子名称: Tol-Pal system protein TolB
著者Stogios, P.J, Evdokimova, E, Endres, M, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-05-18
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Crystal structure of TolB from Acinetobacter baumannii
To Be Published
6OE5
DownloadVisualize
BU of 6oe5 by Molmil
Splayed open prefusion RSV F captured by CR9501 and motavizumab Fabs
分子名称: CR9501 Fab Heavy Chain, CR9501 Fab Light Chain, Fusion glycoprotein F0,Fibritin, ...
著者Gilman, M.S.A, McLellan, J.S.
登録日2019-03-27
公開日2019-04-17
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Transient opening of trimeric prefusion RSV F proteins.
Nat Commun, 10, 2019
5XEJ
DownloadVisualize
BU of 5xej by Molmil
Crystal Structure of Macrophage Migration Inhibitory Factor bound to MTX
分子名称: (2~{R})-2-[[4-[[2,4-bis(azanyl)pteridin-6-yl]methyl-methyl-amino]phenyl]carbonylamino]pentanedioic acid, Macrophage migration inhibitory factor, SULFATE ION
著者Takimoto-Kamimura, M, Fukushima, K.
登録日2017-04-05
公開日2018-07-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of macrophage migration inhibitory factor in complex with methotrexate.
Acta Crystallogr D Struct Biol, 77, 2021
6PIK
DownloadVisualize
BU of 6pik by Molmil
Tetrameric cryo-EM ArnA
分子名称: Bifunctional polymyxin resistance protein ArnA, UDP-4-amino-4-deoxy-L-arabinose formyltransferase
著者Yang, M, Gehring, K.
登録日2019-06-26
公開日2019-07-31
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Cryo-electron microscopy structures of ArnA, a key enzyme for polymyxin resistance, revealed unexpected oligomerizations and domain movements.
J.Struct.Biol., 208, 2019
7NGB
DownloadVisualize
BU of 7ngb by Molmil
Structure of Wild-Type Human Potassium Chloride Transporter KCC3 in NaCl (LMNG/CHS)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Isoform 2 of Solute carrier family 12 member 6, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Chi, G, Man, H, Pike, A.C.W, Wang, D, McKinley, G, Mukhopadhyay, S.M.M, MacLean, E.M, Chalk, R, Moreau, C, Snee, M, Abrusci, P, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Marsden, B.D, Burgess-Brown, N.A, Duerr, K.L.
登録日2021-02-09
公開日2021-06-09
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Phospho-regulation, nucleotide binding and ion access control in potassium-chloride cotransporters.
Embo J., 40, 2021
6OO2
DownloadVisualize
BU of 6oo2 by Molmil
Vps4 with Cyclic Peptide Bound in the Central Pore
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Designed Cyclic Peptide, ...
著者Han, H, Fulcher, J.M, Dandey, V.P, Sundquist, W.I, Kay, M.S, Shen, P, Hill, C.P.
登録日2019-04-22
公開日2019-08-21
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structure of Vps4 with circular peptides and implications for translocation of two polypeptide chains by AAA+ ATPases.
Elife, 8, 2019
4MNC
DownloadVisualize
BU of 4mnc by Molmil
Crystal structure of a TRAP periplasmic solute binding protein from Polaromonas sp. JS666 (Bpro_4736), Target EFI-510156, with bound benzoyl formate, space group P21
分子名称: BENZOYL-FORMIC ACID, SULFATE ION, TRAP dicarboxylate transporter-DctP subunit
著者Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Zhao, S, Stead, M, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Jacobson, M.P, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2013-09-10
公開日2013-09-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
3APF
DownloadVisualize
BU of 3apf by Molmil
Crystal structure of human PI3K-gamma in complex with CH5039699
分子名称: 3-[7-(1H-benzimidazol-5-yl)-2-(morpholin-4-yl)-6,7-dihydro-5H-pyrrolo[2,3-d]pyrimidin-4-yl]phenol, Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma isoform, SULFATE ION
著者Nakamura, M, Fukami, T.A, Miyazaki, T, Yoshida, M.
登録日2010-10-14
公開日2011-04-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Discovery and biological activity of a novel class I PI3K inhibitor, CH5132799
Bioorg.Med.Chem.Lett., 21, 2011
5XHA
DownloadVisualize
BU of 5xha by Molmil
Aspergillus kawachii beta-fructofuranosidase complexed with fructose
分子名称: Extracellular invertase, SODIUM ION, beta-D-fructofuranose, ...
著者Nagaya, M, Tonozuka, T.
登録日2017-04-19
公開日2017-07-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a beta-fructofuranosidase with high transfructosylation activity from Aspergillus kawachii
Biosci. Biotechnol. Biochem., 81, 2017
6UOD
DownloadVisualize
BU of 6uod by Molmil
Asparaginase II from Escherichia coli
分子名称: L-asparaginase 2
著者Araujo, T.S, Almeida, M.S, Lima, L.M.T.R.
登録日2019-10-14
公開日2020-10-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Biophysical characterization of two commercially available preparations of the drug containing Escherichia coli L-Asparaginase 2.
Biophys.Chem., 271, 2021
8Q01
DownloadVisualize
BU of 8q01 by Molmil
Neck of phage 812 after tail contraction (C6)
分子名称: Adaptor protein, Capsid protein, Tail sheath protein, ...
著者Cienikova, Z, Siborova, M, Fuzik, T, Plevka, P.
登録日2023-07-27
公開日2024-08-07
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Genome anchoring, retention, and release by neck proteins of Herelleviridae phage 812
To Be Published
6OBS
DownloadVisualize
BU of 6obs by Molmil
PP1 Y134K
分子名称: GLYCEROL, MANGANESE (II) ION, PHOSPHATE ION, ...
著者Choy, M.S, Moon, T.M, Bray, J.A, Archuleta, T.L, Shi, W, Peti, W, Page, R.
登録日2019-03-21
公開日2019-09-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献SDS22 selectively recognizes and traps metal-deficient inactive PP1.
Proc.Natl.Acad.Sci.USA, 116, 2019
4OS3
DownloadVisualize
BU of 4os3 by Molmil
Three-dimensional structure of the C65A-W112F double mutant of Human lipocalin-type Prostaglandin D Synthase apo-form
分子名称: Prostaglandin-H2 D-isomerase
著者Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
登録日2014-02-12
公開日2014-08-06
最終更新日2014-12-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
6OE4
DownloadVisualize
BU of 6oe4 by Molmil
Prefusion RSV F monomer bound by neutralizing antibody CR9501
分子名称: 1,2-ETHANEDIOL, CR9501 Fab Heavy Chain, CR9501 Fab Light Chain, ...
著者McLellan, J.S, Gilman, M.S.A.
登録日2019-03-27
公開日2019-04-17
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Transient opening of trimeric prefusion RSV F proteins.
Nat Commun, 10, 2019
8QHC
DownloadVisualize
BU of 8qhc by Molmil
Cryo-EM structure of SidH from Legionella pneumophila in complex with LubX
分子名称: E3 ubiquitin--protein ligase, Elongation factor Tu, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Sharma, R, Adams, M, Bhogaraju, S.
登録日2023-09-07
公開日2023-10-11
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for the toxicity of Legionella pneumophila effector SidH.
Nat Commun, 14, 2023
3ASX
DownloadVisualize
BU of 3asx by Molmil
Human Squalene synthase in complex with 1-{4-[{4-chloro-2-[(2-chlorophenyl)(hydroxy)methyl]phenyl}(2,2-dimethylpropyl)amino]-4-oxobutanoyl}piperidine-3-carboxylic acid
分子名称: (3R)-1-{4-[{4-chloro-2-[(S)-(2-chlorophenyl)(hydroxy)methyl]phenyl}(2,2-dimethylpropyl)amino]-4-oxobutanoyl}piperidine-3-carboxylic acid, PHOSPHATE ION, Squalene synthase
著者Shimizu, H, Suzuki, M, Katakura, S, Yamazaki, K, Higashihashi, N, Ichikawa, M, Yokomizo, A, Itoh, M, Sugita, K, Usui, H.
登録日2010-12-22
公開日2011-12-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of a new 2-aminobenzhydrol template for highly potent squalene synthase inhibitors
Bioorg.Med.Chem., 19, 2011
8CZC
DownloadVisualize
BU of 8czc by Molmil
AT from first module of the pikromycin synthase
分子名称: Narbonolide/10-deoxymethynolide synthase PikA1, modules 1 and 2
著者Keatinge-Clay, A.T, Dickinson, M.S, Miyazawa, T, McCool, R.S.
登録日2022-05-24
公開日2022-06-08
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Priming enzymes from the pikromycin synthase reveal how assembly-line ketosynthases catalyze carbon-carbon chemistry.
Structure, 30, 2022
5XCO
DownloadVisualize
BU of 5xco by Molmil
Crystal structure of human K-Ras G12D Mutant in complex with GDP and Cyclic Inhibitory Peptide
分子名称: 1,2-ETHANEDIOL, ACE-ARG-ARG-ARG-ARG-CYS-PRO-LEU-TYR-ILE-SER-TYR-ASP-PRO-VAL-CYS-ARG-ARG-ARG-ARG-NH2, GTPase KRas, ...
著者Sogabe, S, Miwa, M.
登録日2017-03-23
公開日2017-05-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal Structure of a Human K-Ras G12D Mutant in Complex with GDP and the Cyclic Inhibitory Peptide KRpep-2d
ACS Med Chem Lett, 8, 2017
6OU3
DownloadVisualize
BU of 6ou3 by Molmil
Crystal Structure of the D478S Variant of the Myocilin Olfactomedin Domain
分子名称: GLYCEROL, Myocilin, SODIUM ION
著者Hill, S.E, Kwon, M.S, Lieberman, R.L.
登録日2019-05-03
公開日2019-07-03
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Stable calcium-free myocilin olfactomedin domain variants reveal challenges in differentiating between benign and glaucoma-causing mutations.
J.Biol.Chem., 294, 2019
6ORM
DownloadVisualize
BU of 6orm by Molmil
Crystal Structure of Peruvianin-I (Cysteine peptidase from Thevetia peruviana latex)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peruvianin-I, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Cruz, W.T, Bezerra, E.H.S, da Silva, F.M.S, Freire, V.N, Ramos, M.V, Rocha, B.A.M, Freitas, C.D.T.
登録日2019-04-30
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure and specific location of a germin-like protein with proteolytic activity from Thevetia peruviana.
Plant Sci., 298, 2020
4ORW
DownloadVisualize
BU of 4orw by Molmil
Three-dimensional structure of the C65A-K59A double mutant of Human lipocalin-type Prostaglandin D Synthase apo-form
分子名称: Prostaglandin-H2 D-isomerase
著者Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
登録日2014-02-12
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.664 Å)
主引用文献High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon