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PDB: 51689 件

4M7J
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Crystal structure of S25-26 in complex with Kdo(2.8)Kdo(2.4)Kdo trisaccharide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, DI(HYDROXYETHYL)ETHER, ...
著者Haji-Ghassemi, O, Evans, S.V, Muller-Loennies, S, Saldova, R, Muniyappa, M, Brade, L, Rudd, P.M, Harvey, D.J, Kosma, P, Brade, H.
登録日2013-08-12
公開日2014-04-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Groove-type Recognition of Chlamydiaceae-specific Lipopolysaccharide Antigen by a Family of Antibodies Possessing an Unusual Variable Heavy Chain N-Linked Glycan.
J.Biol.Chem., 289, 2014
1J2U
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Creatininase Zn
分子名称: SULFATE ION, ZINC ION, creatinine amidohydrolase
著者Yoshimoto, T, Tanaka, N, Kanada, N, Inoue, T, Nakajima, Y, Haratake, M, Nakamura, K.T, Xu, Y, Ito, K.
登録日2003-01-11
公開日2004-01-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism
J.Mol.Biol., 337, 2004
1J3E
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Crystal Structure of the E.coli SeqA protein complexed with N6-methyladenine- guanine mismatch DNA
分子名称: 5'-D(*AP*AP*GP*GP*(6MA)P*TP*CP*CP*AP*A)-3', 5'-D(*TP*TP*GP*GP*AP*GP*CP*CP*TP*T)-3', SeqA protein
著者Fujikawa, N, Kurumizaka, H, Nureki, O, Tanaka, Y, Yamazoe, M, Hiraga, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-01-24
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and biochemical analyses of hemimethylated DNA binding by the SeqA protein
Nucleic Acids Res., 32, 2004
3LRM
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Structure of alfa-galactosidase from Saccharomyces cerevisiae with raffinose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Fernandez-Leiro, R, Pereira-Rodriguez, A, Cerdan, M.E, Becerra, M, Sanz-Aparicio, J.
登録日2010-02-11
公開日2010-06-30
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural analysis of Saccharomyces cerevisiae alpha-galactosidase and its complexes with natural substrates reveals new insights into substrate specificity of GH27 glycosidases.
J.Biol.Chem., 285, 2010
4MA5
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The crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit of Francisella tularensis subsp. tularensis SCHU S4 in complex with an ATP analog, AMP-PNP.
分子名称: FORMIC ACID, GLYCEROL, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Tan, K, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-08-15
公開日2013-08-28
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.809 Å)
主引用文献The crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit of Francisella tularensis subsp. tularensis SCHU S4 in complex with an ATP analog, AMP-PNP.
To be Published
4M1V
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Crystal structure of the ancestral soluble variant of the Human Phosphate Binding Protein (HPBP)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ...
著者Gonzalez, D, Hiblot, J, Darbinian, N, Miller, J.S, Gotthard, G, Amini, S, Chabriere, E, Elias, M.
登録日2013-08-04
公開日2014-01-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Ancestral mutations as a tool for solubilizing proteins: The case of a hydrophobic phosphate-binding protein.
FEBS Open Bio, 4, 2014
6EHL
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Model of the Ebola virus nucleoprotein in recombinant nucleocapsid-like assemblies
分子名称: Nucleoprotein
著者Wan, W, Kolesnikova, L, Clarke, M, Koehler, A, Noda, T, Becker, S, Briggs, J.A.G.
登録日2017-09-13
公開日2017-11-08
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Structure and assembly of the Ebola virus nucleocapsid.
Nature, 551, 2017
6IHX
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Crystal Structure Analysis of bovine Hemoglobin modified by SNP
分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Kihira, K, Morita, Y, Yamada, T, Kureishi, M, Komatsu, T.
登録日2018-10-03
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Quaternary Structure Analysis of a Hemoglobin Core in Hemoglobin-Albumin Cluster.
J Phys Chem B, 122, 2018
4ZVI
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GYRASE B IN COMPLEX WITH 4,5-DIBROMOPYRROLAMIDE-BASED INHIBITOR
分子名称: DNA gyrase subunit B, IODIDE ION, N-(4-{[(4,5-dibromo-1H-pyrrol-2-yl)carbonyl]amino}benzoyl)glycine
著者Zidar, N, Macut, H, Tomasic, T, Brvar, M, Montalvao, S, Tammela, P, Solmajer, T, Peterlin Masic, L, Ilas, J, Kikelj, D.
登録日2015-05-18
公開日2015-07-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献N-Phenyl-4,5-dibromopyrrolamides and N-Phenylindolamides as ATP Competitive DNA Gyrase B Inhibitors: Design, Synthesis, and Evaluation.
J.Med.Chem., 58, 2015
7Z39
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Structure of Belumosudil bound to CK2alpha
分子名称: 2-[3-[4-(1~{H}-indazol-5-ylamino)quinazolin-2-yl]phenoxy]-~{N}-propan-2-yl-ethanamide, ACETATE ION, Casein kinase II subunit alpha, ...
著者Brear, P, Hyvonen, M.
登録日2022-03-01
公開日2022-10-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the Rho-associated coiled-coil kinase 2 inhibitor belumosudil bound to CK2 alpha.
Acta Crystallogr.,Sect.F, 78, 2022
5A66
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Crystal structure of AtTTM3 in complex with tripolyphosphate and manganese ion (form A)
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, TRIPHOSPHATE, ...
著者Martinez, J, Truffault, V, Hothorn, M.
登録日2015-06-24
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
3LRK
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Structure of alfa-galactosidase (MEL1) from Saccharomyces cerevisiae
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Fernandez-Leiro, R, Pereira-Rodriguez, A, Cerdan, M.E, Becerra, M, Sanz-Aparicio, J.
登録日2010-02-11
公開日2010-06-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural analysis of Saccharomyces cerevisiae alpha-galactosidase and its complexes with natural substrates reveals new insights into substrate specificity of GH27 glycosidases.
J.Biol.Chem., 285, 2010
4M3G
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Rapid and efficient design of new inhibitors of Mycobacterium tuberculosis transcriptional repressor EthR using fragment growing, merging and linking approaches
分子名称: 4-(2-methyl-1,3-thiazol-4-yl)-N-(3,3,3-trifluoropropyl)benzenesulfonamide, HTH-type transcriptional regulator EthR
著者Villemagne, B, Flipo, M, Blondiaux, N, Crauste, C, Malaquin, S, Leroux, F, Piveteau, C, Villeret, V, Brodin, P, Villoutreix, B, Sperandio, O, Wohlkonig, A, Wintjens, R, Deprez, B, Baulard, A, Willand, N.
登録日2013-08-06
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ligand Efficiency Driven Design of New Inhibitors of Mycobacterium tuberculosis Transcriptional Repressor EthR Using Fragment Growing, Merging, and Linking Approaches.
J.Med.Chem., 57, 2014
5A1U
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The structure of the COPI coat triad
分子名称: ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT ALPHA, COATOMER SUBUNIT BETA, ...
著者Dodonova, S.O, Diestelkoetter-Bachert, P, von Appen, A, Hagen, W.J.H, Beck, R, Beck, M, Wieland, F, Briggs, J.A.G.
登録日2015-05-06
公開日2015-07-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (13 Å)
主引用文献Vesicular Transport. A Structure of the Copi Coat and the Role of Coat Proteins in Membrane Vesicle Assembly.
Science, 349, 2015
4MCS
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A high resolution structure of human glutamate carboxypeptidase II (GCPII) His475Tyr variant in complex with glutamic acid
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ASPARTIC ACID, ...
著者Ptacek, J, Barinka, C, Sacha, P, Navratil, M.
登録日2013-08-21
公開日2014-06-18
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural and biochemical characterization of the folyl-poly-gamma-l-glutamate hydrolyzing activity of human glutamate carboxypeptidase II.
Febs J., 281, 2014
7ZCF
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SARS-CoV-2 Spike RBD in complex with the single chain fragment scFv76 (Focused Refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin, scFv76 single chain fragment
著者Chaves-Sanjuan, A, Bolognesi, M.
登録日2022-03-28
公開日2022-10-12
最終更新日2023-02-08
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Spike mutation resilient scFv76 antibody counteracts SARS-CoV-2 lung damage upon aerosol delivery.
Mol.Ther., 31, 2022
1IH0
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Structure of the C-domain of Human Cardiac Troponin C in Complex with Ca2+ Sensitizer EMD 57033
分子名称: 5-[1-(3,4-DIMETHOXY-BENZOYL)-1,2,3,4-TETRAHYDRO-QUINOLIN-6-YL]-6-METHYL-3,6-DIHYDRO-[1,3,4]THIADIAZIN-2-ONE, CALCIUM ION, TROPONIN C, ...
著者Wang, X, Li, M.X, Spyracopoulos, L, Beier, N, Chandra, M, Solaro, R.J, Sykes, B.D.
登録日2001-04-18
公開日2001-10-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the C-domain of human cardiac troponin C in complex with the Ca2+ sensitizing drug EMD 57033.
J.Biol.Chem., 276, 2001
2MJV
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Solution structures of second bromodomain of Brd4 with di-acetylated Twist peptide
分子名称: Bromodomain-containing protein 4, Twist-related protein 1
著者Zeng, L, Zhou, M.
登録日2014-01-16
公開日2014-03-19
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Disrupting the Interaction of BRD4 with Diacetylated Twist Suppresses Tumorigenesis in Basal-like Breast Cancer.
Cancer Cell, 25, 2014
3LTE
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CRYSTAL STRUCTURE OF RESPONSE REGULATOR (SIGNAL RECEIVER DOMAIN) FROM Bermanella marisrubri
分子名称: GLYCEROL, PHOSPHATE ION, Response regulator
著者Patskovsky, Y, Toro, R, Gilmore, M, Miller, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-02-15
公開日2010-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献CRYSTAL STRUCTURE OF RESPONSE REGULATOR SIGNAL RECEIVER DOMAIN FROM Bermanella marisrubri RED65
To be Published
6IRR
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Solution structure of DISC1/ATF4 complex
分子名称: Disrupted in schizophrenia 1 homolog,Cyclic AMP-dependent transcription factor ATF-4
著者Ye, F, Yu, C, Zhang, M.
登録日2018-11-14
公開日2019-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural interaction between DISC1 and ATF4 underlying transcriptional and synaptic dysregulation in an iPSC model of mental disorders.
Mol. Psychiatry, 2019
3LV4
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Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.
分子名称: ACETATE ION, CALCIUM ION, Glycoside hydrolase YxiA
著者Vorobiev, S, Abashidze, M, Seetharaman, J, Belote, R.L, Ciccosanti, C, Sahdev, S, Xiao, R, Acton, T.B, Everett, J.K, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2010-02-19
公開日2010-03-09
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.695 Å)
主引用文献Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis.
To be Published
5ACG
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X-ray Structure of LPMO
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, COPPER (II) ION, ...
著者Frandsen, K.E.H, Poulsen, J.N, Tovborg, M, Johansen, K.S, Lo Leggio, L.
登録日2015-08-17
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献The molecular basis of polysaccharide cleavage by lytic polysaccharide monooxygenases.
Nat. Chem. Biol., 12, 2016
1IWY
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Crystal Structure Analysis of Human lysozyme at 170K.
分子名称: CHLORIDE ION, LYSOZYME C
著者Joti, Y, Nakasako, M, Kidera, A, Go, N.
登録日2002-06-03
公開日2002-09-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Nonlinear temperature dependence of the crystal structure of lysozyme: correlation between coordinate shifts and thermal factors.
Acta Crystallogr.,Sect.D, 58, 2002
3LW2
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Mouse Plasminogen Activator Inhibitor-1 (PAI-1)
分子名称: Plasminogen activator inhibitor 1
著者Dewilde, M, Van De Craen, B, Compernolle, G, Madsen, J.B, Strelkov, S.V, Gils, A, Declerck, P.J.
登録日2010-02-23
公開日2010-04-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Subtle structural differences between human and mouse PAI-1 reveal the basis for biochemical differences.
J.Struct.Biol., 171, 2010
5ADX
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CryoEM structure of dynactin complex at 4.0 angstrom resolution
分子名称: ACTIN RELATED PROTEIN 1, ACTIN RELATED PROTEIN 11, ACTIN, ...
著者Zhang, K, Urnavicius, L, Diamant, A.G, Motz, C, Schlage, M.A, Yu, M, Patel, N.A, Robinson, C.V, Carter, A.P.
登録日2015-08-24
公開日2015-12-30
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献The Structure of the Dynactin Complex and its Interaction with Dynein.
Science, 347, 2015

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