Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51689 results

8BYL
DownloadVisualize
BU of 8byl by Molmil
Cryo-EM structure of SKP1-SKP2-CKS1 from the SCFSKP2 E3 ligase complex
Descriptor: Cyclin-dependent kinase inhibitor 1B, Cyclin-dependent kinases regulatory subunit 1, S-phase kinase-associated protein 1, ...
Authors:Rowland, R.J, Salamina, M, Endicott, J.A, Noble, M.E.M.
Deposit date:2022-12-13
Release date:2023-06-28
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of SKP1-SKP2-CKS1 in complex with CDK2-cyclin A-p27KIP1.
Sci Rep, 13, 2023
8CIH
DownloadVisualize
BU of 8cih by Molmil
Structure of FL CINP
Descriptor: Cyclin-dependent kinase 2-interacting protein, SODIUM ION
Authors:Foglizzo, M, Zeqiraj, E.
Deposit date:2023-02-09
Release date:2024-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The SPATA5-SPATA5L1 ATPase complex directs replisome proteostasis to ensure genome integrity.
Cell, 187, 2024
6OU3
DownloadVisualize
BU of 6ou3 by Molmil
Crystal Structure of the D478S Variant of the Myocilin Olfactomedin Domain
Descriptor: GLYCEROL, Myocilin, SODIUM ION
Authors:Hill, S.E, Kwon, M.S, Lieberman, R.L.
Deposit date:2019-05-03
Release date:2019-07-03
Last modified:2020-01-15
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Stable calcium-free myocilin olfactomedin domain variants reveal challenges in differentiating between benign and glaucoma-causing mutations.
J.Biol.Chem., 294, 2019
166L
DownloadVisualize
BU of 166l by Molmil
CONTROL OF ENZYME ACTIVITY BY AN ENGINEERED DISULFIDE BOND
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME
Authors:Blaber, M, Matthews, B.W.
Deposit date:1994-06-20
Release date:1994-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Alanine scanning mutagenesis of the alpha-helix 115-123 of phage T4 lysozyme: effects on structure, stability and the binding of solvent.
J.Mol.Biol., 246, 1995
5EO7
DownloadVisualize
BU of 5eo7 by Molmil
Crystal structure of AOL
Descriptor: Predicted protein, SULFATE ION, methyl 1-seleno-alpha-L-fucopyranoside
Authors:Kato, R, Kiso, M, Ishida, H, Ando, H, Suzuki, T, Shimabukuro, S, Makyio, H.
Deposit date:2015-11-10
Release date:2016-06-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Six independent fucose-binding sites in the crystal structure of Aspergillus oryzae lectin
Biochem.Biophys.Res.Commun., 477, 2016
5HZX
DownloadVisualize
BU of 5hzx by Molmil
Crystal structure of zebrafish MTH1 in complex with TH588
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Narwal, M, Gustafsson, R, Brautigam, L, Pudelko, L, Jemth, A.-S, Gad, H, Karsten, S, Carreras-Puigvert, J, Homan, E, Berndt, C, Berglund, U.W, Helleday, T, Stenmark, P.
Deposit date:2016-02-03
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Hypoxic Signaling and the Cellular Redox Tumor Environment Determine Sensitivity to MTH1 Inhibition.
Cancer Res., 76, 2016
5HY1
DownloadVisualize
BU of 5hy1 by Molmil
high resolution structure of barbiturase
Descriptor: 1,3,5-triazine-2,4,6-triol, Barbiturase, CHLORIDE ION, ...
Authors:Peat, T.S, Scott, C, Balotra, S, Wilding, M, Newman, J.
Deposit date:2016-02-01
Release date:2017-02-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes.
Appl. Environ. Microbiol., 83, 2017
8BYN
DownloadVisualize
BU of 8byn by Molmil
Chronic traumatic encephalopathy tau filaments with PET ligand flortaucipir
Descriptor: 7-(6-fluoranylpyridin-3-yl)-5~{H}-pyrido[4,3-b]indole, Microtubule-associated protein tau
Authors:Shi, Y, Ghetti, B, Goedert, M, Scheres, S.H.W.
Deposit date:2022-12-13
Release date:2023-01-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM Structures of Chronic Traumatic Encephalopathy Tau Filaments with PET Ligand Flortaucipir.
J.Mol.Biol., 435, 2023
5HZK
DownloadVisualize
BU of 5hzk by Molmil
Crystal structure of photoinhibitable Intersectin1 containing wildtype LOV2 domain in complex with Cdc42
Descriptor: Cell division control protein 42 homolog, FLAVIN MONONUCLEOTIDE, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Tarnawski, M, Dagliyan, O, Chu, P.H, Shirvanyants, D, Dokholyan, N.V, Hahn, K.M, Schlichting, I.
Deposit date:2016-02-02
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Engineering extrinsic disorder to control protein activity in living cells.
Science, 354, 2016
8C5I
DownloadVisualize
BU of 8c5i by Molmil
Cyanide dihydratase from Bacillus pumilus C1 variant - Q86R,H305K,H308K,H323K
Descriptor: Cyanide dihydratase
Authors:Mulelu, A.E, Reitz, J, van Rooyen, J, Scheffer, M, Frangakis, A.S, Dlamini, L.S, Woodward, J.D, Benedik, M.J, Sewell, B.T.
Deposit date:2023-01-09
Release date:2023-01-18
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:The Role of Histidine Residues in the Oligomerization of Cyanide Dihydratase from Bacillus pumilus C1
To Be Published
5HY8
DownloadVisualize
BU of 5hy8 by Molmil
Glycation restrains allosteric transition in hemoglobin: The molecular basis of oxidative stress under hyperglycemic conditions in diabetes
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, OXYGEN MOLECULE, ...
Authors:Saraswathi, N.T, Pannu, N.S, Syakhovich, V.E, Saurabh, A, Bokut, S.B, Moras, D, Ruff, M.
Deposit date:2016-02-01
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Glycation restrains allosteric transition in hemoglobin: The molecular basis of oxidative stress under hyperglycemic conditions in diabetes
To Be Published
8BZJ
DownloadVisualize
BU of 8bzj by Molmil
Human MST3 (STK24) kinase in complex with inhibitor MRLW5
Descriptor: 1,2-ETHANEDIOL, 8-(4-azanylbutyl)-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one, Serine/threonine-protein kinase 24
Authors:Balourdas, D.I, Rak, M, Tesch, R, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2022-12-14
Release date:2023-01-18
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Development of Selective Pyrido[2,3- d ]pyrimidin-7(8 H )-one-Based Mammalian STE20-Like (MST3/4) Kinase Inhibitors.
J.Med.Chem., 67, 2024
1A0M
DownloadVisualize
BU of 1a0m by Molmil
1.1 ANGSTROM CRYSTAL STRUCTURE OF A-CONOTOXIN [TYR15]-EPI
Descriptor: ALPHA-CONOTOXIN [TYR15]-EPI
Authors:Hu, S.-H, Loughnan, M, Miller, R, Weeks, C.M, Blessing, R.H, Alewood, P.F, Lewis, R.J, Martin, J.L.
Deposit date:1997-12-03
Release date:1999-01-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The 1.1 A resolution crystal structure of [Tyr15]EpI, a novel alpha-conotoxin from Conus episcopatus, solved by direct methods.
Biochemistry, 37, 1998
5EQ8
DownloadVisualize
BU of 5eq8 by Molmil
Crystal structure of Medicago truncatula Histidinol-Phosphate Phosphatase (MtHPP) in complex with L-histidinol
Descriptor: CHLORIDE ION, Inositol monophosphatase, L-histidinol
Authors:Ruszkowski, M, Dauter, Z.
Deposit date:2015-11-12
Release date:2016-03-30
Last modified:2016-06-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Studies of Medicago truncatula Histidinol Phosphate Phosphatase from Inositol Monophosphatase Superfamily Reveal Details of Penultimate Step of Histidine Biosynthesis in Plants.
J.Biol.Chem., 291, 2016
7Q0L
DownloadVisualize
BU of 7q0l by Molmil
Crystal structure of the peptide transporter YePEPT-K314A at 2.93 A
Descriptor: Peptide transporter YePEPT
Authors:Jeckelmann, J.M, Stauffer, M, Ilgue, H, Boggavarapu, R, Fotiadis, D.
Deposit date:2021-10-15
Release date:2022-03-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Peptide transporter structure reveals binding and action mechanism of a potent PEPT1 and PEPT2 inhibitor.
Commun Chem, 5, 2022
7Q0M
DownloadVisualize
BU of 7q0m by Molmil
Crystal structure of the peptide transporter YePEPT-K314A in complex with LZNV at 2.66 A
Descriptor: (2~{S})-2-[[(2~{S})-2-azanyl-6-[(4-nitrophenyl)methoxycarbonylamino]hexanoyl]amino]-3-methyl-butanoic acid, Peptide transporter YePEPT, UNDECYL-MALTOSIDE
Authors:Jeckelmann, J.M, Stauffer, M, Ilgue, H, Fotiadis, D.
Deposit date:2021-10-15
Release date:2022-03-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Peptide transporter structure reveals binding and action mechanism of a potent PEPT1 and PEPT2 inhibitor.
Commun Chem, 5, 2022
5ER3
DownloadVisualize
BU of 5er3 by Molmil
Crystal structure of ABC transporter system solute-binding protein from Rhodopirellula baltica SH 1
Descriptor: CALCIUM ION, GLYCEROL, Sugar ABC transporter, ...
Authors:Chang, C, Duke, N, Endres, M, Mack, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-11-13
Release date:2015-11-25
Method:X-RAY DIFFRACTION (2.105 Å)
Cite:Crystal structure of ABC transporter system solute-binding protein from Rhodopirellula baltica SH 1
To Be Published
5I22
DownloadVisualize
BU of 5i22 by Molmil
Amphiphysin SH3 in complex with Chikungunya virus nsP3 peptide
Descriptor: CHIKV nsP3 peptide, Myc box-dependent-interacting protein 1
Authors:Tossavainen, H, Aitio, O, Hellman, M, Saksela, K, Permi, P.
Deposit date:2016-02-04
Release date:2016-06-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural Basis of the High Affinity Interaction between the Alphavirus Nonstructural Protein-3 (nsP3) and the SH3 Domain of Amphiphysin-2.
J.Biol.Chem., 291, 2016
6ORM
DownloadVisualize
BU of 6orm by Molmil
Crystal Structure of Peruvianin-I (Cysteine peptidase from Thevetia peruviana latex)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peruvianin-I, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cruz, W.T, Bezerra, E.H.S, da Silva, F.M.S, Freire, V.N, Ramos, M.V, Rocha, B.A.M, Freitas, C.D.T.
Deposit date:2019-04-30
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure and specific location of a germin-like protein with proteolytic activity from Thevetia peruviana.
Plant Sci., 298, 2020
5ERW
DownloadVisualize
BU of 5erw by Molmil
Structure of HCV E2 glycoprotein antigenic Epitope II bound to the broadly neutralizing antibody HC84-26
Descriptor: Anti-HCV E2 Fab HC84-26 heavy chain, Anti-HCV E2 Fab HC84-26 light chain, HCV E2 glycoprotein Epitope II
Authors:Gao, M, Mariuzza, R.
Deposit date:2015-11-15
Release date:2016-11-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of HCV E2 glycoprotein antigenic Epitope II bound to the broadly neutralizing antibody HC84-26
To Be Published
7PO6
DownloadVisualize
BU of 7po6 by Molmil
Xist (m6A)UCG tetraloop RNA bound to the YTH domain of YTHDC1
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-TRIPHOSPHATE, Isoform 2 of YTH domain-containing protein 1, ...
Authors:Jones, A.N, Mourao, A, Sattler, M.
Deposit date:2021-09-08
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural effects of m6A modification of the Xist A-repeat AUCG tetraloop and its recognition by YTHDC1.
Nucleic Acids Res., 50, 2022
1A7Z
DownloadVisualize
BU of 1a7z by Molmil
CRYSTAL STRUCTURE OF ACTINOMYCIN Z3
Descriptor: ACTINOMYCIN Z3, BENZENE
Authors:Schafer, M.
Deposit date:1998-03-19
Release date:1999-03-23
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Crystal Structures of Actinomycin D and Actinomycin Z3.
Angew.Chem.Int.Ed.Engl., 37, 1998
5ERL
DownloadVisualize
BU of 5erl by Molmil
Crystal structure of the epimerase SnoN in complex with Ni2+, succinate and nogalamycin RO
Descriptor: NICKEL (II) ION, Nogalamycin RO, SUCCINIC ACID, ...
Authors:Selvaraj, B, Lindqvist, Y, Siitonen, V, Metsa-Ketela, M, Schneider, G.
Deposit date:2015-11-14
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Divergent non-heme iron enzymes in the nogalamycin biosynthetic pathway.
Proc.Natl.Acad.Sci.USA, 113, 2016
8BYK
DownloadVisualize
BU of 8byk by Molmil
The structure of MadC from Clostridium maddingley reveals new insights into class I lanthipeptide cyclases
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Knospe, C.V, Kamel, M, Spitz, O, Hoeppner, A, Galle, S, Reiners, J, Kedrov, A, Smits, S.H, Schmitt, L.
Deposit date:2022-12-13
Release date:2023-02-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of MadC from Clostridium maddingley reveals new insights into class I lanthipeptide cyclases.
Front Microbiol, 13, 2022
1AB6
DownloadVisualize
BU of 1ab6 by Molmil
STRUCTURE OF CHEY MUTANT F14N, V86T
Descriptor: CHEMOTAXIS PROTEIN CHEY
Authors:Wilcock, D, Pisabarro, M.T, Lopez-Hernandez, E, Serranno, L, Coll, M.
Deposit date:1997-02-04
Release date:1998-02-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure analysis of two CheY mutants: importance of the hydrogen-bond contribution to protein stability.
Acta Crystallogr.,Sect.D, 54, 1998

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon